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6 protocols using i9018

1

Raffinose-Induced Lipid Accumulation in NHEK Cells

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NHEK cells were seeded in 60-mm dishes and incubated overnight. After treatment with raffinose, the cells were washed twice with phosphate-buffered saline. The culture medium was changed every 48 h for raffinose treatment. Nile-red staining including fluorescence microscopy was performed as previously described39 (link). Immunocytochemistry was performed essentially as previously described using specific antibodies against involucrin (I9018, Sigma-Aldrich), loricrin (sc-51130, Santa Cruz Biotechnology), filaggrin (sc-66192, Santa Cruz Biotechnology), AQP3 (ab125219, Abcam), and LXR (PP-PPZ0412-10, Perseus Proteomics, Tokyo, Japan)39 (link).
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2

LXR Regulation of Epidermal Barrier Genes

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HaCaT cells were seeded in DMEM with 5% charcoal-stripped FBS, and the medium was changed to DMEM with 1% charcoal-stripped FBS for treatment of the testing materials to avoid any interference caused by steroid-like substances present in FBS. Isolation of total RNA, cDNA synthesis, and qRT-PCR were performed as previously described using specific primers as shown in Table S2. Western blotting was performed using specific antibodies against LXRα and LXRβ (PA1–332, Thermo Scientific, Waltham, MA), filaggrin (sc-66192, Santa Cruz Biotechnology, CA), SCD1 (sc-14719, Santa Cruz Biotechnology), loricrin (sc-51130, Santa Cruz Biotechnology), ABCA1 (ab18180, Abcam, Cambridge, UK), ABCG1 (ab52617, Abcam), involucrin (I9018, Sigma-Aldrich), ChREBP (NB400-135, Novus Biologicals, Littleton, CO), AQP3 (ab125219, Abcam), Actin (sc-1616, Santa Cruz Biotechnology), and α-tubulin (05-829, Millipore, Billerica, MA), as previously described39 (link). ChIP assays were performed using antibodies against LXR (PA1-332, Thermo Scientific), JunD (sc-74, Santa Cruz Biotechnology), Fra1 (sc-28310, Santa Cruz Biotechnology), p300 (sc-585, Santa Cruz Biotechnology), and AcH3K9 (ab4441, Abcam). Immunoprecipitated DNA was amplified by PCR with specific primers as described previously (Table S2)39 (link).
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3

Immunohistochemical Analysis of RHE

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After 15 days of culture, RHE were fixed with a 4% paraformaldehyde solution for 24 h and kept in 30% sucrose for 48 h at 4°C. RHE on membranes were separated from the insert and embedded in OCT embedding matrix (Leica, Wetzlar, Germany). Immediately, specimens were snap-frozen in isopentane on dry ice and then kept at -20°C. RHE were cut into 7 μm thick slices with a cryomicrotome (Leica). Before immunostaining, cryosections were incubated in citrate buffer (0.01 M and pH 6) at 90°C for 45 min and saturated with TBS containing 1% bovine serum albumin, 3% goat serum, and 0.3% Triton X-100, for 1 hour. The immunohistofluorescent staining was performed using primary antibodies specific to Ki67 (550609, BD Pharmingen, Le Pont-de-Claix, France), involucrin (I9018, Sigma-Aldrich), loricrin (PRB-145P, Covance ref.), catalase (12980, Cell Signaling), SOD1 (ab183881, Abcam), and SOD2 (ab13533, Abcam) which were incubated overnight at 4°C. Cryosections were subsequently incubated with the corresponding secondary antibodies (Alexa Fluor 568 goat anti-rabbit IgG, A-21069, or Alexa Fluor 488 goat anti-mouse IgG, A-21121, Invitrogen) for 1 h at room temperature. Before mounting, nuclei were stained with a solution of 50 μM bisbenzimide (Sigma-Aldrich) for 10 min at room temperature. Finally, cryosections were mounted using Fluoromount-G mounting medium (Thermo Fisher Scientific).
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4

Immunofluorescence Characterization of Differentiated Cells

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Cells were seeded on 0.1% gelatin-coated coverslips in a 24-well plate at 5400 cells per well. They were fixed after 10 days of differentiation with 4% paraformaldehyde for 20 min at room temperature, incubated for 10 min in glycine 1 mM to quench PFA and permeabilized with 0.5% Triton X-100 in DPBS+/+ (Gibco™, Life Technologies) for 7 min with 3 × 5 min of washing in DPBS+/+ between each step. After blocking in 5% BSA for 30 min, cells were incubated with primary antibodies overnight at 4 °C in a humidified chamber. Primary antibodies used were against CKRT1 (1/250, BioLegend), ZNF750 (HPA023012, 1/300, Sigma Aldrich), TGM1 (sc-25786, 1/50, Santacruz), and IVL (I9018, 1/100, Sigma). Cells were washed in DPBS+/+ and incubated with corresponding secondary antibodies (goat anti-rabbit AlexaFluor® 488 or goat anti-rabbit AlexaFluor® 594, Life Technologies) diluted at 1/3000 in blocking buffer for 1 h at room temperature protected from light. Coverslips were finally washed, mounted on microscope slides (DAPI fluoromount-G™, Electron Microscopy Sciences), and visualized under a Nikon Eclipse Ti epifluorescence microscope equipped with an OrcaFlash 4.0 LT camera (Hamamatsu). Picture analyses were conducted using NIS-Elements software.
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5

Protein Expression Analysis of Monolayer and 3D Organoids

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Whole-cell lysates from cells in monolayer culture and 3D organoids were prepared as described previously (17 (link)). Equivalent amounts (20–40 μg) of protein were loaded into a NuPAGE 4 to 12% Bis-Tris gel. Following electrophoresis, transfer to a polyvinylidene difluoride membrane, and blocking with 5% bovine serum albumin or non-fat milk, membranes were incubated with primary antibodies at 4°C overnight. The primary antibodies used were follows: anti-LOX (1:500; NB100–2527; Novus Biologicals, Centennial, CO, USA), anti-TP63 (1:1000; ab124762; Abcam, Cambridge, UK), anti-IVL (1:1000; I9018; Millipore Sigma, Burlington, MA, USA), anti-DSG1 (1:1000; sc-137164; Santa Cruz Biotechnology, Dallas, TX, USA), anti-BMP2 (1:1000; ab214821; Abcam), anti-phospho-SMAD1/5/9 (1:1000;13820S; Cell Signaling Technology, Danvers, MA, USA), and anti-β-actin (1:5000; A5316; Millipore Sigma). Immunoblots were detected with an appropriate horseradish peroxidase (HRP)-conjugated secondary antibody (1:2000; NA934 or NA 931; Amersham BioSciences, Buckinghamshire, UK) by ECL detection (Bio-Rad Laboratories, Hercules, CA, USA). β-Actin served as a loading control.
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6

Whole-Cell Lysate Protein Analysis in 2D and 3D Cultures

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Whole-cell lysates from cells in monolayer culture and 3D organoids were prepared as described previously.17 (link) Equivalent amounts (20–40 μg) of protein were loaded into a NuPAGE 4% to 12% Bis-Tris gel. After electrophoresis, transfer to a polyvinylidene difluoride membrane, and blocking with 5% bovine serum albumin or nonfat milk, membranes were incubated with primary antibodies at 4°C overnight. The primary antibodies used were as follows: anti-LOX (1:500, NB100-2527; Novus Biologicals, Centennial, CO), anti-TP63 (1:1000, ab124762; Abcam, Cambridge, UK), anti-IVL (1:1000, I9018; Millipore Sigma, Burlington, MA), anti-DSG1 (1:1000, sc-137164; Santa Cruz Biotechnology, Dallas, TX), anti-BMP2 (1:1000, ab214821; Abcam), anti–phosphorylated-SMAD1/5/9 (1:1000, 13820S; Cell Signaling Technology, Danvers, MA), and anti–β-actin (1:5000, A5316; Millipore Sigma). Immunoblots were detected with an appropriate horseradish peroxidase–conjugated secondary antibody (1:2000, NA934 or NA 931; Amersham BioSciences, Buckinghamshire, UK) by ECL detection (Bio-Rad Laboratories, Hercules, CA). β-actin served as a loading control.
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