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Rat anti mouse pecam 1

Manufactured by BD
Sourced in Germany

Rat anti-mouse PECAM-1 is a laboratory reagent used for the detection and quantification of mouse PECAM-1, also known as CD31. PECAM-1 is a cell adhesion molecule expressed on the surface of various cell types, including endothelial cells, platelets, and certain leukocytes. This reagent can be used in various immunological techniques, such as flow cytometry, immunohistochemistry, and Western blotting, to study the expression and distribution of PECAM-1 in biological samples.

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5 protocols using rat anti mouse pecam 1

1

Isolation of Murine Lung Endothelial Cells

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Lungs were harvested from 6-day-old mice, shredded and digested with 1 mg/mL collagenase I in Dulbecco’s modified Eagle’s medium in waterbath at 37 degrees Celsius (°C) for 1 h with shaking every 10 min. The minced tissue was filtered (70 mm pore size, BD Falcon) follow by centrifugation at 1000 × g for 10 min at 4 °C. Cells were resuspended in 0.1% BSA, 2 mM EDTA, in DPBS, and were then incubated with G-coated magnetic beads (Invitrogen) pre-coupled with rat anti-mouse PECAM-1 (BD Pharmingen, 553370) for 30 min with agitation. Then, CD31+ cells were isolated using a magnetic rack separator. After three washes with PBS, cells were centrifuged for 5 min at 1000 × g and resuspend in RNA lysis buffer. The RNA was purified with the RNeasy Plus Mini Kit (Qiagen, #74134) and reverse transcribed to cDNAs using IScript Reverse Transcriptase III (Bio-Rad, #170–8891) according to manufacturers’ instructions.
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2

Immunohistochemical Analysis of Tumor Vasculature

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Animals were euthanized after imaging. Tumors were resected, frozen in liquid nitrogen vapor, and cut in slices of 8–10 μm. Fixation of the frozen sections and the staining procedure were performed as described [29 (link)]. For staining, primary antibodies against CD31 (rat anti-mouse PECAM-1; BD Biosciences), SMA (biotinylated mouse anti-SMA, Progen), and collagen IV (rabbit anti-collagen IV, Novotec) as well as corresponding secondary antibodies were used [27 (link)]. Cell nuclei were counterstained by 4′,6-diamidino-2-phenylindole (DAPI; Invitrogen). Apoptotic cells in the tissue were detected by TUNEL staining using the “In Situ Cell Death Detection Kit, TMR red” (Roche Diagnostics). Stained sections were examined and photographed (Zeiss Axio Imager M2, Carl Zeiss, MicroImaging GmbH).
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3

Immunofluorescence on Whole Mount Embryos

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Immunofluorescence on whole mount embryos was adapted from previously described protocols (Foo et al., 2006 (link)). Embryos were incubated overnight at 4°C with the primary antibody, rat anti-mouse PECAM-1 (BD Pharmingen, RRID:AB_393571, 1:100) or Gata6, washed and incubated overnight at 4°C with α-SMA, Cy3-conjugated (Sigma-Aldrich, RRID:AB_476856) and goat anti-rat IgG Alexa 488-conjugated (Invitrogen, RRID:AB_141373, 1:100). After washing, embryos were dehydrated and mounted in Methyl Salicylate (Sigma-Aldrich, M2047) for clearing. Images were collected on a Leica TCS SP5 AOBS inverted confocal microscope and processed using ImageJ (v1.48). Amira software (Version 6.4; FEI, RRID:SCR_014305) was used to create the reconstructions of complete z-stacks of wild-type and transgenic embryos. Sagittal sections of paraffin embedded E10.5 embryos were labeled using the antibodies described above. In situ hybridization was carried out as described previously (Kanzler et al., 1998 (link)), using Meis1 probe (a gift from Dorothea Schulte).
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4

Quantitative Protein Expression Analysis

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Whole cell protein lysates were prepared from lungs, MLEC and MBEC with RIPA buffer (Sigma) supplemented with protease and phosphatase inhibitors (cOmplete, mini and PhosSTOP from Roche). Protein concentrations were determined with BCA protein assay (Thermo Fisher Scientific, Loughborough, UK). Immunoblotting of lysates was performed using reducing conditions (except for TFPI expression levels) with 4‐12% NuPAGE pre‐cast gels and transfer units (Invitrogen). Blocked membranes were incubated overnight at 4°C with the following primary antibodies: mouse anti‐porcine Glyceraldehyde 3‐phosphate dehydrogenase (GAPDH) (Novus Biological, Cambridge, UK), rabbit anti‐mouse eNOS and peNOS (Santa Cruz Biotechnology, Heidelberg, Germany), rat anti‐mouse PECAM‐1 (BD Biosciences), rat anti‐mouse ICAM‐1 (Biolegend), goat anti‐mouse thrombomodulin (R&D, Bio‐Techne, Abingdon, UK), goat anti‐mouse TFPI (R&D, Bio‐Techne), rabbit anti‐human fibrinogen α (Santa Cruz Biotechnology). Detection and quantification of chemiluminescence intensity were quantified by using ChemidocTM imaging system and Image Lab 5.2.1 software (Biorad, Watford, UK). Protein levels were quantified and normalised against loading controls (GAPDH).
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5

Whole-mount Immunostaining of Tissue Samples

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For whole-mount immunostaining, tissue was fixed in 4% PFA for 2h at RT, permeabilised in 0.3% Triton-X100 in PBS (PBSTx) and blocked in PBSTx plus 3% milk. Primary antibodies were incubated at 4C overnight in blocking buffer. After washing in PBSTx, the samples were incubated with fluorocrome-conjugated secondary antibodies in blocking PBSTx plus 1% milk, washed and mounted in Mowiol. The following antibodies were used: rat anti-mouse LYVE-1 (R&D systems), rat anti-mouse PECAM1 (BD), rabbit anti-human Prox1 (generated against human Prox1 C-terminus (567-737aa), Prox1-GST construct provided by Dr. T. Petrova, University of Lausanne), rabbit anti-GFP (Invitrogen), chicken anti-GFP (Abcam), rat anti-mouse Endomucin (Santa Cruz Biotechnology), hamster anti-mouse Podoplanin (Developmental Studies Hybridoma Bank), goat anti-mouse Neuropilin-2 (all from R&D Systems). Secondary antibodies conjugated to DyLight 405, AF488, Cy3 or AF647 were obtained from Jackson ImmunoResearch. For primary LECs immunostaining, cells were fixed with 4 % PFA/PBS for 20 min at RT and permeabilized using 0,5% Triton-X-100/PBS for 5 min at RT followed by blocking with 3% BSA/0.3%Triton for 1h and incubation with primary antibodies (GFP-antibody; VE-cadherin C19, SantaCruz). Primary antibodies were detected with AlexaFluor 488 and AlexaFluor 647 -coupled secondary antibodies (Jackson Immunoresearch).
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