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Anti ki67 clone mib 1

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Sourced in United States, Denmark, United Kingdom, Germany

Anti-Ki67 (clone MIB-1) is a primary antibody used in immunohistochemistry (IHC) applications. It recognizes the Ki-67 protein, which is a cellular marker for proliferation. The antibody can be used to identify and quantify the fraction of actively proliferating cells in a sample.

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16 protocols using anti ki67 clone mib 1

1

Immunohistochemical Staining and Analysis

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Immunohistochemical (IHC) staining from human tissue microarray or mouse xenograft samples was performed on 3-μm-thick sections from formalin-fixed paraffin-embedded samples and dried in a 37 °C oven overnight. Hematoxylin/eosin (H&E) staining was performed with H&E Leica Kit Infinity for a full automated autostainer (Leica ST5020). IHC staining for Ki67 and MGP antibodies was performed using Bond III IHC autostainer for full Automated Immunohistochemistry (Leica biosystems). Antigen was unmasked with Tris-EDTA pH 9 (Bond Epitop Retrival Solution 2 Leica, cat# AR9640). Both mouse monoclonal anti-Ki67 CloneMIB-1 (Dako, cat# M7240) and rabbit polyclonal antibody MGP (ProteinTech, cat# 10734-1-AP) were used at 1:200. The antibodies were diluted with Bond Primary Antibody Diluent AR9352 Leica. BOND IHC Polymer Detection Kit (cat# DS9800) was used to stain both antibody with DAB Cromogen. IHC samples were counterstained using Hematoxylin solution (Leica, cat# RE7107-CE). Pictures of stained sections were acquired with the Aperio ScanScope XT instrument. Ki67 and MGP staining were analyzed and scored by a board-certified pathologist (GB).
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2

Immunohistochemical Profiling of Tumor Markers

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IHC staining was performed at RT on an automatic staining workstation (Dako Autostainer Plus, Glostrup, Denmark) using anti-SDCBP (ab133267, Abcam, Cambridge, UK), anti-p21 (Clone 4D10; Leica Biosystems NCL-L-WAF-1, Barcelona, Spain) at a 1:10 dilution, anti-E-cadherin (BD Biosciences, CA, USA) at a 1:4000 dilution, anti-Src (active) Clone 28 (#AHO0051, Thermo Fisher Scientific, Waltham, MA, USA) at a 1:300 dilution, anti-Ki67 (clone MIB-1, Dako, Glostrup, Denmark) for 30 min, and anti-Nanog and anti-Notch antibodies, as described. [21 (link)] Counterstaining with Hematoxylin and eosin was the final step. For the Ki-67, p21, and Notch1 proteins, nuclear staining was evaluated and dichotomized as a negative expression (0–10% stained cells) versus positive expression (>10% stained tumor cells). E-cadherin, Src, Nanog, and Notch1 were scored as described [14 (link),21 (link)]. Validation of SDCBP was performed at the nuclear, membrane, and cytoplasmic levels in each patient according to the immunoreactive score (IRS) by multiplying the quantity and staining intensity scores (Table S1).
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3

Immunohistochemical Staining of Mouse Tissues

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Hematoxylin and eosin (H&E) and IHC stainings were performed at the Mouse Pathology Facility of Lausanne University (Epalinges, Switzerland). IHC labeling was performed using the mouse monoclonal anti-human vimentin Ab (clone RV202, GeneTex, CA, USA), anti-Ki67 (clone MIB-1, Dako, Denmark), and anti-cleaved caspase-3 (ASP175)(#9661, Cell Signaling Technology Inc.) on 4 μm-thick paraffin-embedded mouse tissue sections.
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4

Immunohistochemical Analysis of Breast Biopsies

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Whole, 4-µm-thick, paraffin embedded breast core needle biopsy sections were analysed using conventional immunohistochemical (IHC) staining. Staining of the slides has been described elsewhere [26 (link)]. Briefly, the sections were incubated with primary monoclonal mouse anti-human antibodies, [anti-oestrogen receptor alpha (clone ID5, 1:60), anti-progesterone receptor (clone PgR 363, 1:50), or anti-Ki-67 (clone MIB-1, 1:75)], all from Dako (Dako Pathology, Stockholm, Sweden), in Antibody Diluent (Dako) for 30 min. A positive reaction was detected using 3,3’-diaminobenzidine (DAB) (Dako) and tissues were counterstained with haematoxylin.
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5

Molecular Profiling of Glioma Samples

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Genomic DNA was isolated from paraffin-embedded samples of 229 patients. The DNA methylation status of the CpG islands at the MGMT promoter was determined by methylation-specific polymerase chain reaction, as described, with some modifications.[16 (link),17 (link)]Representative tissue sections were assessed by immunohistochemistry, using a Ventana BenchMark XT autostainer (Ventana Medical System, Inc. Tucson, AZ) according to the manufacturer's protocols. Primary antibodies included anti-human IDH1 R132H mouse monoclonal (clone H09L, Dianova, 1:80 dilution) and anti-Ki-67 (clone Mib-1, Dako, 1:150 dilution). Samples showing cytoplasmic expression of IDH1 R132H in glioma cells were classified as positive for mutation, with all others classified as “wild-type.” MIB-1 (Ki67) score was defined as the percentage of positive nuclei among 1000 tumor cells, or as many as possible in the case of small specimens.
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6

Comprehensive Immunostaining Protocol

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The following antibodies were used for immunostaining: anti-actin, α-smooth muscle (clone 1A4, A2547), anti-VCAN (polyclonal, HPA004726), anti-COL11A1 (polyclonal, HPA052246), anti-COL1A1 (polyclonal, HPA011795), anti-FN1 (polyclonal, F3648) all from Sigma-Aldrich, UK; anti-Ki67 (cloneMIB-1, M7240), from Dako, UK; anti-fibroblast activation protein, alpha (EPR 20021, ab207178), anti-COMP (ab11056), anti-CTSB (CA10, ab58802), anti-TGFβ all from Abcam; anti-PAX8 (NBP1-32440) from Novus; anti-EPCAM Alexa Fluor 488 conjugated (53-8326-41) from Thermo-Fisher; GLI-1 Antibody (C-1, sc-515751) from Santa Cruz Biotechnology.
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7

Comprehensive Immunohistochemical Profiling of Tumors

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Formaldehyde-fixed and paraffin-embedded tumors were sectioned to 2 µm, following de-waxing, peroxidase blocking and antigen-retrieval using EDTA buffer. Detection of CD271, CD31, Ki67, S100, vimentin, MITF, HMB45 and MART1/MLANA was performed with anti-CD271 (clone D4B3, XP, Cell signaling), anti-CD31 (clone JC/70A, Dako), anti-Ki67 (clone MIB1, Dako), anti-S100 (clone 15E2/E2, BioGenex), anti-vimentin (clone V9, Dako), anti-MITF (clones C5 + D5, Zytomed), anti-melanosom (clone HMB45, Dako) or anti-MART1 (clone A103, Dako) with an automated staining system (BenchMark Ultra, Ventana Medical Systems, USA). Histological staining was performed with hematoxylin/eosin (H&E, Merck). Immunohistochemical staining of two antigens was performed with the DakoCytomation kit (Dako).
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8

Histopathological Analysis of HNSCC Tumors

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Morphology of patient tumor tissue and their corresponding PDX models was studied by an expert pathologist. Histopathology of primary tumors and PDX followed standard protocols for HNSCC staging including HE staining and immunohistochemistry; antibodies: anti-CD8 (Clone C8/144B, Dako, Hamburg, Germany, anti-p16 (clone: G175-405, BD Bioscience, Heidelberg, Germany), anti-Ki-67 (Clone Mib-1, Dako), anti-PD-L1 (Clone 22C3, Dako).
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9

Histological Evaluation of HNSCC Tumors

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The morphology of the patients’ tumor tissue and their corresponding PDX was studied by an expert pathologist. Histopathology of primary tumors and PDX followed standard protocols for HNSCC diagnostics including HE staining and immunohistochemistry; antibodies: anti-p16 (clone: G175-405, BD Bioscience, Heidelberg, Germany), anti-Ki-67 (Clone Mib-1, Dako, Glostrup, Denmark), anti-PD-L1 (Clone 22C3, Dako), and anti-p53 (Clone Do7, Dako). Standard immunoperoxidase technique was applied using an automated immunostainer, Autostainer Link48 (DAKO) with diaminobenzidine as chromogen.
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10

Immunohistochemical Analysis of TS, Ki67, and TTF-1

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Serial 5-μm-thick sections were collected into charged slides. After paraffin removal, rehydration through graded alcohols, and endogenous peroxidase activity quenching, the sections were treated in a pressure cooker for 5 min at 125°C, followed by a quick 10-s step at 90°C using EDTA buffer (pH 8.0). The slides were then incubated for 40 min at room temperature with primary mouse anti-TS antibody (clone 106; dilution, 1:100; Zymed), anti-Ki67 (clone MIB-1; dilution, 1:150; Dako) and TTF-1 (dilution, 1:75; anti-TTF1 antibody; ab76013, ABCAM, San Francisco, CA, USA). To assess TS immunostaining, the percentage of positive tumor cells was scored semiquantitatively as follows: low, if TS-positive cells were <10%; moderate, if TS-positive cells were between 11% and 39%; and high if TS-positive cells were >40%. The intensity of the expression index of Ki67 was divided into the following groups: <20%: low, 20–30%: high, >30%: very high.
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