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Integrated development for r

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Integrated Development for R is a comprehensive software environment designed for the R programming language. It provides a centralized platform for writing, testing, and executing R code, as well as managing R packages and data. The software offers a range of tools and features to enhance the R development workflow.

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3 protocols using integrated development for r

1

Evaluating Statin Impact on Neuroimaging

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A combination of software packages was used for analyses, including SPSS Statistics version 22.0 (IBM Corp., Armonk, NY), RStudio: Integrated Development for R (RStudio, Inc., Boston, MA), and SAS version 9.4 (SAS Institute Inc., Cary, NC). Two-sided significance was set at α=0.05 (type I error rate). Standard summary measures were used to describe demographic and clinical characteristics for the sample, stratified by statin exposure, with group comparisons obtained through t test for continuous variables and χ2 test for categorical variables. ANCOVA models adjusting for age and sex were used to test for associations between statin exposure and individual neuroimaging measures and to generate corresponding adjusted Cohen’s d effect sizes. Prior to statistical analysis, the amyloid and tau PET and WMH phenotypes were transformed by natural log to ensure a normal distribution. To assess the robustness of associations of the statin exposure variable with neuroimaging measures, post-hoc sensitivity analyses were performed using a one-to-one age- (within 3 years) and sex-matched subset of 522 individuals and using conditional logistic regression to account for the matching.
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2

Meta-analysis and Trial Sequential Analysis

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Conventional meta-analysis, NMA and meta-regression were performed using RStudio (version 1.0.153), Integrated Development for R. RStudio, Inc., Boston, MA with package ‘netmeta’ (version 0.9-8), and ‘meta’ (version 4.9-7). Trial sequential analysis software (version 0.9 Copenhagen Trial Unit, Copenhagen, Denmark) was used to perform this analysis.
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3

Comparative Analysis of Coded Kidney Diagnoses

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The automatically generated, previously coded, rejected, and validated ICD diagnoses were compared per code category and per specific code. The prevalence of the codes was calculated for all inpatient cases and for inpatient cases with coded KD (all diagnoses). The proportion of specific medical information (text, laboratory values, reference to KDIGO classification, and formal KDIGO staging) documented in the corresponding discharge letters was calculated.
The following software were used during analyses: Medical coding software Systems Applications and Products in Data Processing Industry Solution Healthcare (SAP IS-H), Medical Coding Tool ID Diacos, Clinical Data Phoenix CGM, Business Data Ware House SAP BW, Microsoft Excel 2010, R developing software (R version 3.5.0 2018-4-23), RStudio version 1.1.453, and RStudio Team (2016) as well as RStudio: Integrated Development for R (RStudio, Inc) and ggplot2 version 3.1.0.
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