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56 protocols using ab13248

1

Brain Tissue Protein Analysis

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Total proteins in the brain tissues were extracted in RIPA lysis buffer (Beyotime), and the protein concentration was measured by a BCA protein concentration kit (Beyotime). The proteins were then separated by sodium dodecyl sulfate‐polyacrylamide gel electrophoresis and electro‐transferred onto the polyvinylidene difluoride membrane (Millipore). After being blocked with 5% skimmed milk for 1 h at room temperature, the membranes were firstly incubated with primary antibodies, including anti‐p‐IKKβ (1:500; ab194519; Abcam), anti‐IKKβ (1:1000; ab124957; Abcam), anti‐p‐IkBα (1:3000; ab133462; Abcam), anti‐IkBα (1:1000; ab32518; Abcam), anti‐NF‐κB p65 (1:1000; ab16502; Abcam), anti‐NF‐κB p‐p65 (S536) (1:500; ab86299; Abcam), anti‐Nrf2 (1:1000; ab62352; Abcam), anti‐HO‐1 (1:500; ab13248; Abcam), anti‐NQO1 (1:500; ab80588; Abcam), anti‐Histone 3 (1:1000; ab1791; Abcam), and anti‐β‐actin (1:1000; ab8226; Abcam), at 4℃ overnight and then with corresponding secondary antibodies (1:3000; Beyotime) at room temperature for 1 h. The blotted protein bands were visualized by an enhanced chemiluminescence kit (Beyotime, Shanghai, China). Image J software (NIH Image) was used to analyze the gray level of the bands.
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2

Western Blot Analysis of Cardiac Proteins

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Proteins were extracted from frozen heart tissues and subjected to sodium dodecyl sulfate-polyacrylamide gel electrophoresis [20 (link), 21 (link)]. After that, the proteins were transferred to PVDF membranes (Merck Millipore, Massachusetts, USA). Membranes were then blocked in nonfat milk for 2 hours and incubated overnight at 4°C with primary antibodies against Nrf2 (Abcam, Cambridge, MA, UK, ab62352, 1 : 1000), heme oxygenase 1 (HO-1, Abcam, ab13248, 1 : 1000), GAPDH (Abcam, ab181602, 1 : 1000), Bax (Abcam, ab32503, 1 : 1000), and Bad (Abcam, ab32445, 1 : 1000). After that, the membrane was reacted with the secondary antibodies for 1 h at room temperature, was stained with an enhanced chemiluminescence reagent, and was visualized using the BIO-RAD ChemiDoc Touch Imaging System (BIO-RAD, Hercules, CA, USA). GAPDH was used as the internal control.
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3

Western Blot Analysis of NRF2 Pathway

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Total protein, nucleoprotein and cytoplasmic protein of MRC-5 cells were extracted using Radio Immunoprecipitation Assay Buffer (Beyotime, Shanghai, China) and EpiQuik Nuclear Extraction Kit (Epigentek, Farmingdale NY, USA), respectively. Protein samples were quantified by Bio-Rad Protein Assay (Bio-Rad, Hercules CA, USA) and then loaded to sodium dodecyl sulfate-polyacrylamide gel electrophoresis. Protein bands on the gel were then transferred to polyvinylidene fluoride membranes, which were then blocked in 5% skim milk for 4 h at room temperature. The membranes were incubated in Tris-buffered saline and Tween 20 (TBST) containing the specific primary antibodies against NRF2, KEAP1, NQO1, GCLC, HO1 and GAPDH (ab89443, ab150654, ab28947, ab55435, ab13248 and ab8245; Abcam, Cambridge, UK) overnight at 4 °C. After washed in TBST for five times, the membranes were incubated in horse radish peroxidase-conjugated secondary antibodies (ab6708, Abcam) for 2 h at room temperature, and then washed again in TBST for five times. Protein signals were developed using ECL Plus Western Blotting Substrate (Pierce, Carlsbad CA, USA).
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Western Blot Analysis of Antioxidant Proteins

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Cell pellets or lung tissues were lysed in RIPA lysis buffer containing 1 mM phenylmethanesulfonyl fluoride (Applygen Technologies, Inc., Beijing, China) on ice, and the concentration of the sample proteins was tested using the BCA method before being mixed in 5X SDS loading buffer. Following heat denaturation at 100°C for 5 min, equal amounts of lysate (60 mg) were separated by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and transferred onto nitrocellulose membranes (Applygen Technologies, Inc.). The membranes were blocked with 5% fat-free milk for 1 h at room temperature, followed by incubation with primary antibodies against β-actin (1:500; sc-130301; Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA), Bach1 (1:300; ab49657), HO-1 (1:500; ab13248), GPx1 (1:1,000; ab140883) and NQO1 (1:500; ab28947) (all from Abcam, Cambridge, UK) at 4°C overnight. The following day, the membranes were incubated with fluorescent-labeled secondary antibodies (1:10,000; 600-101-096; Rockland, Inc., Gilbertsville, PE, USA) for 1 h at room temperature, and the bands were visualized using a double-infrared laser scanning imaging system (LI-COR Biosciences, Lincoln, NE, USA). Protein expression was analyzed and normalized to that of β-actin.
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5

Western Blot Analysis of Podocyte Proteins

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Podocytes were lysed using RIPA buffer, and protein concentration was determined using the BCA protein assay kit. Approximately 30 μg of protein from each sample was separated using a 10% SDS-polyacrylamide gel and transferred to PVDF membranes. Membranes were blocked with 5% skim milk in TBST and incubated with primary antibodies overnight at 4°C. Membranes were then incubated with the corresponding secondary antibodies for 1 h at room temperature and washed in TBST. Proteins were detected using specific antibodies: HMOX1: Abcam, ab13248; Sirt1: Abcam,ab110304; LC3B:Abcam,ab63817; AMPK:Abcam,ab110036; p-AMPK: Abcam,ab194920; P62: Abcam,ab56416; beta-actin: Abcam: ab115777.
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6

EGFR and HO-1 Protein Analysis

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The following antibodies were used:
Rabbit monoclonal anti-EGFR (ab52894, Abcam, Cambridge, UK); mouse monoclonal anti-EGFR (sc-120, Santa Cruz Biotechnology, USA); mouse monoclonal anti-EGFRvIII (L8A4, Absolute Antibodies, UK); rabbit polyclonal anti-EGFR (ab5652, Abcam, UK); mouse monoclonal anti-HO-1 (ab13248, Abcam, UK); mouse monoclonal anti-β-actin (AC-15, Sigma-Aldrich, USA); IRDye® 800CW goat anti-mouse IgG (827-08364, LI-COR Biotechnology, Germany); IRDye® 680RD goat anti-rabbit IgG (926-68071, LI-COR Biotechnology, Germany).
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7

Inflammatory response and HO-1 expression in transgenic goat ears

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The ears of three 8-month-old transgene-positive goats were injected intradermally with 100 μL of 3 mg/mL Pam3CSK4, after which the tissues were collected at 1, 8, and 48 h [18 (link), 19 (link)]. Samples were fixed with 4% paraformaldehyde and embedded in paraffin. Hematoxylin and eosin staining was used to investigate inflammatory responses and immunohistochemistry was used to detect HO-1 protein expression (Abcam, ab13248, Cambridge, UK). Six fields from each slide were randomly selected. Optical densities were quantified by scanning densitometry and expressed in arbitrary units determined by Image J software (NIH, USA).
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8

Protein Expression Analysis in Kidney Tissues

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Partial kidney tissues were thoroughly homogenized in a lysis buffer (0.97% protease inhibitor cocktail, 0.94% 50 mM phenylmethylsulfonyl fluoride, and 97.09% 1x RIPA) on ice. The protein concentrations of the homogenates were measured using the BCA Protein Assay Kit (Merck Millipore, USA); 50 μg of protein was electrophoresed on 12% SDS-PAGE, transferred onto polyvinylidene difluoride (PVDF) membrane (Merck Millipore, USA), and blocked in 5% bovine serum albumin (BSA) in Tris-buffered saline. Then, the bands were incubated overnight at 4°C in a corresponding primary antibody solution containing Nrf2 (ab137550), HO-1 (ab13248), SOD1 (ab13498), SOD2 (ab13533), and CAT (ab16731) (1 : 2000; Abcam, UK) or glyceraldehyde 3-phosphate dehydrogenase (GAPDH, ABS16, 1 : 2000, Merck Millipore, USA) and then incubated with horseradish peroxidase-conjugated goat anti-rabbit secondary antibodies (bs-0295G, 1 : 2000, Beijing Biosynthesis Biotechnology Co. Ltd., China) for 4 hours at 4°C. Specific signals were visualized with ECL detection on a gel imaging system (UVP, California, USA). The average optical density of the bands was quantified using ImageJ (National Institutes of Health, Bethesda, USA).
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9

Western Blot Analysis of Kidney Proteins

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Western blots were performed as previously described [25 (link)]. Total protein was extracted from kidney tissue in RIPA lysis buffer (25 mM Tris-HCl, 25 mM NaCl, 0.5 mM EDTA, 1% Triton X-100, and 0.1% SDS) with 1% PMSF protease inhibitors (P1005, Beyotime Biotechnology, China) and phosphatase inhibitors (P1081, Beyotime Biotechnology, China) added. Equal amounts of protein were separated by 10-15% SDS-PAGE and then transferred to PVDF membranes (IPVH00010, Millipore, Germany). After blocking with 5% nonfat milk for 3 h, the membranes were incubated with the primary antibodies including TGF-β1, α-SMA, Nrf2, HO-1, NQO1, ASC, caspase-1 (ab215715, ab32575, ab137550, ab13248, ab80588, ab175449, ab1872, Abcam, UK), p-Smad2, Smad2, p-Smad3, Smad3, E-cadherin, NLRP3 ((#18338, #5339, #9520, #9523, #3195, #15101, Cell Signaling Technology, USA), and cleaved caspase-1 (AF4005, Affinity Biosciences, USA) at 4°C overnight. Then, the membranes were washed 3 times with TBST and incubated with the secondary antibodies for 1 h at room temperature. After washing with TBST for a further three times, the protein bands were visualized by enhanced chemiluminescence (32134, Thermo, USA) solution and imaged with Automated Imaging System (Gene Gnome5, Synoptics Ltd, UK). GAPDH or β-actin was assumed to be similarly abundant in all samples and was used as a loading control.
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10

Immunofluorescence Analysis of Bach2 and HO-1

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Cells were fixed with 4% formaldehyde and pre-incubated with 10% normal goat serum (710,027, KPL, USA), and then incubated with primary antibodies anti-Bach2 (ab83364, Abcam) and anti-HO-1 (ab13248, Abcam). Secondary antibodies were fluoresce-labeled antibody to rabbit IgG (021516, KPL, USA) and rhodamine-labeled antibody to mouse IgG (031806, KPL, USA). DAPI (157,574, MB biomedical) was used for nuclear counter staining. Images were captured by confocal microscopy (DM6000 CFS, Leica) and processed by LAS AF software.
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