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Jumpstart taq dna polymerase enzyme

Manufactured by Merck Group
Sourced in United States

Jumpstart Taq DNA Polymerase is an enzyme used in the amplification of DNA sequences through the polymerase chain reaction (PCR) process. It catalyzes the synthesis of new DNA strands complementary to a DNA template, a key step in the PCR technique.

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3 protocols using jumpstart taq dna polymerase enzyme

1

Quantitative Real-Time PCR Gene Expression Analysis

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Total RNA was isolated using the RNeasy Plus Mini Kit (Quiagen, USA), and cDNA was synthesized from 1 μg of RNA via a High Capacity RNA-to-cDNA Kit (Life Technologies, USA) following the manufacturer’s instructions. Gene expression was analyzed by quantitative real-time PCR (qPCR) using MyiQ real time PCR System (Bio-Rad, USA). The applied primers (Supplementary Table 3) were designed by Oligo software (Oligo Perfect Designer, Invitrogen, USA). Reactions were measured in duplicates using custom 2× Syber Green Master Mix based on the hot-start Jumpstart Taq DNA Polymerase enzyme (Sigma, USA). The amplification was done for 40 cycles (95 °C 20 sec, 60 °C 20 sec, 72 °C 40 sec). To verify the PCR products, melting curves and negative controls were carried out in each reaction. Relative quantification of mRNA was determined by the ΔΔCt method (2−ΔΔCt formula)19 (link) by using the expression profile of the corresponding control samples as reference.
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2

Quantitative Analysis of MuSC Transcriptome

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Total RNA from the MuSCs, iMuSCs, and the neuronal differentiating iMuSCs were isolated using the RNeasy Plus Mini Kit (Qiagen, USA). Total RNA from the biopsied TA tissues was isolated using the RNeasy Microarray Tissue Mini Kit (Qiagen, USA). cDNA was synthesized from 1 µg of RNA via iScriptTM cDNA Synthesis Kit (Bio-Rad, USA) following manufacturer’s instructions. Gene expression was analyzed by quantitative real-time PCR (qPCR) using MyiQ real-time PCR (Bio-Rad, USA). The applied primers were designed by Oligo software (Suppl. Table 2) (Oligo Perfect Designer, Invitrogen, USA). Reactions were measured in duplicate using custom 2x Syber Green Master Mix based on the hot-start Jumpstart Taq DNA Polymerase enzyme (Sigma). The amplification was done for 40 cycles (95 °C 20 sec, 60 °C 20 sec, 72 °C 40 sec). To verify the PCR product, melting curves were carried out in each reaction. Relative quantification of mRNA was determined by the ΔΔCt method (2−ΔΔCt formula)24 (link) using the expression profile of the corresponding control samples as reference.
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3

Gamma Irradiation Effects on ABCA1 Expression

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To find the effects of gamma irradiation on ABCA1, qRT-PCR method (Bio-Rad, USA) was done. Briefly, ASCs were washed with PBS and RNA was extracted using 1 ml of cold
RNX-Plus (Invitrogen, Germany). In order to investigate the precision of the RNA, optical densities of extracted RNA were read at 260 and 280 nm using a NanoDrop
spectrophotometer (Wilmington, DE, USA). Then, cDNA was made by the cDNA synthesis kit according to the manufacturer’s instruction (Fermentas, Canada).
All reactions were measured by 2x SYBR Green Master Mix (Applied Biosystems, USA) according to the hot-start Jumpstart Taq DNA Polymerase enzyme (Sigma, USA).
The β-actin gene was considered as the housekeeping gene and all qPCR reactions were repeated twice. The primers were designed by AllelID software (Oligo Perfect Designer, Invitrogen, USA).
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