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2 protocols using anti gabarapl1

1

Investigating Autophagy Regulation Mechanisms

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In this study, we utilized MG132 (Z-Leu-Leu-Leu-H (aldehyde), Peptide Institute), bafilomycin A1 (Sigma), and chloroquine (Wako). The antibodies utilized in this study were anti-NRF1 (D5B10; Cell Signaling Technology), anti-p62 (PM045; MBL), anti-S403-P-p62 (4F6; MBL), anti-ULK1 (D8H5; Cell Signaling Technology), anti-TBK1 (ab109735; Abcam), anti-GFP (sc-9996; Santa Cruz), anti-LC3B (L7543; Sigma), anti-GAPDH (6C5; Santa Cruz), anti-α-tubulin (DM1A; Sigma), anti-HA (12CA5; Sigma), and anti-Myc (sc-40; Santa Cruz) for immunoblot analyses; anti-p62 (PM066; MBL), anti-ULK1 (F-4; Santa Cruz), and anti-S172-P-TBK1 (D52C2; Cell Signaling Technology) for immunofluorescence analysis; anti-ubiquitin (clone FK2) (D058-3; MBL), anti-GABARAPL1 (D5R9Y; Cell Signaling Technology) for immunofluorescence and immunoblot analyses, anti-HA (3F10; Sigma) for immunoprecipitation; and normal rabbit anti-IgG antibody (Wako) and rabbit anti-Nrf1 polyclonal antibody (raised against mouse NRF1 residues from 292 to 741)33 (link) for ChIP assay.
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2

Isolation and Characterization of Dip G

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Dip G (>98% purity) was isolated as previously described22 (link). Chloroquine, oil red O, sodium butyrate (NaB), methyl thiazolyl tetrazolium (MTT) and tamoxifen (TAM) were purchased from Sigma-Aldrich (St. Louis, MO). Z-VAD-FMK and necrostatin-2 were from Selleck (Houston, TX). Anti-E-cadherin (14472), anti-vimentin (5741), anti-N-cadherin(13116), anti-p-β-catenin (Ser33/37/Thr41) (9561), anti-p-β-catenin (Thr41/Ser45) (9565), anti-p-β-catenin (Ser552) (5651), anti-p-β-catenin (Ser675) (4176), anti-β-catenin (8480), anti-c-Myc (18583), anti-LC3B (3868) and anti-GABARAPL1 (26632) were purchased from Cell Signaling Technology (Beverly, MA). Polyclonal anti-GABARAPL1 (11010-1-AP) was from Proteintech Group (Chicago, IL). Anti-ERα (sc-8002), anti-ERβ (sc-373853 X) and anti-β-Actin (sc-47778) were from Santa Cruz Biotechnology (Santa Cruz, CA). Anti-SQSTM1/p62 (ab101266) was from Abcam (Cambridge, UK). CD24 monoclonal antibody (FITC) (11-0247-42), CD44 monoclonal antibody (PE-eFluor 610) (61-0441-80), Lipofectamine 3000 and Lipofectamine RNAi MAX were purchased from Thermo Fisher Scientific (Waltham, MA).
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