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Sh rxi 5sil ms capillary column

Manufactured by Shimadzu
Sourced in Japan

The SH-Rxi-5Sil MS capillary column is a high-performance gas chromatography (GC) column designed for a wide range of applications. It features a 5% diphenyl and 95% dimethylpolysiloxane stationary phase, which provides excellent separation and inertness for a variety of analytes.

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7 protocols using sh rxi 5sil ms capillary column

1

GC-MS Analysis of Root Exudates

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The root exudates were derived by methoxypyridine and N-methyl-N-(trimethylsilyl)trifluoroacetamide. Then, the gas chromatography-mass spectrometry (GC-MS) fingerprints of the root exudates were obtained on a SHIMADZU GCMS-QP2010 instrument (SHIMADZU, Japan). The root exudates were separated on an SH-Rxi-5Sil MS capillary column (221-75954-30, 30 m × 0.25 mm × 0.25 μm, SHIMADZU). The pressure was maintained at 49.5 kPa, giving a column flow of 1 mL/min. The injection volume was 1 μL in splitless mode, and the injector temperature was 250°C. The initial column temperature was 40°C (hold 2 min), and it was increased at a rate of 3°C/min to 80°C and then increased to 260°C at a rate of 5°C/min, at which it was then held for 30 min. The ion source temperature was 230°C with an interface temperature of 250°C. Helium (99.999% purity) was used as the carrier gas at a flow rate of 1 mL/min. Mass spectra were obtained in electron impact (EI) ionization mode at 70 eV by monitoring the full-scan range (m/z 50-500). The compounds were identified by matching the mass spectra obtained with those of the reference compounds stored in the NIST14 library except for the compounds that appeared in the control. The characteristic fragments of the root exudate phenolic acids with more than 80% similarity were compared with those of the phenolic acid standards.
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2

GCMS Analysis of SDEE Composition

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Profiling of SDEE was performed on a Shimadzu GCMS-QP2020 equipped with a Shimadzu AOC-20i Plus auto-injector (Shimadzu Corp., Kyoto, Japan) under electron impact ionization at 70 eV. Separation of components was carried out in SH-Rxi-5Sil MS capillary column with dimensions of 30 m × 0.25 mm ID × 0.25 μm film thickness (Shimadzu Corp., Kyoto, Japan). The initial oven temperature was held at 190°C for 1 min then raised to 300°C at 15°C/min and kept constant for 10 min. Helium was used as the carrier gas with a constant flow rate of 1 mL/min. The injector, MS ion source, and MS interface temperatures were set at 310, 230, and 280°C, respectively. A sample injection of 1 μL was performed in a split mode of 10 : 1 and peaks were detected in full scan acquisition mode from m/z 50 to 500. Identification of the individual components was performed by NIST mass spectral library on the basis of the mass fragment and e/z values of each component. The relative concentration of each peak was computed based on the total ion count.
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3

GC-MS Analysis of Limonene in LUVs

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A Shimadzu GC-2010 Plus system with an AOC-20i Auto-Injector and a GCMS-QP2010 SE ion trap MS system (Shimadzu, Kyoto, Japan) was used for GC-MS analysis using the electron impact ionization mode. Chromatographic separations were performed on a Shimadzu SH-Rxi-5SiL MS capillary column (30 m × 0.25 mm, 0.25mm film thickness; non-polar phase: Crossbond™ 100% dimethyl polysiloxane as stationary phase). The temperatures of the injector and the GC-MS transfer line were 170 and 280 °C, respectively. The carrier gas was ultrahigh purity helium (Airgas); the flow rate was 1.0 mL/min. The mass spectrometer was operated using the following parameters: the ratio of the split injection was 20:1, ionization voltage was 70 eV; ion source temperature was 200 °C; scan mode, 30.0–500.0 (mass range); scan rate, 5000 amu/s, and 3.68 scans/s; start time was 2 min. Electron multiplier (EM) voltage was obtained from autotune. The oven temperature was programmed to hold at 60 °C for 2 min, increase to 300 °C at 50 °C/min, and hold at 300 °C for 3 min.
To measure the residual limonene in LUVs, a 100 μL aliquot is mixed with 1.9 mL of hexane and 50 mg of CaSO4 (used here to disrupt the LUVs) and stirred for 30 min to extract limonene. The data were averaged from at least three independent measurements.
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4

GC-MS Analysis of Plant Extracts

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The GC-MS analysis was carried out on a Shimadzu (GC 2010) GC-MS equipped with an AOC-5000 auto-injector coupled and an SH-Rxi-5Sil MS capillary column (30 m × 0.25 mm i.d., 0.25 μm). The initial temperature of the column was 40 °C held for 4 min and was programmed to 220 °C at 4 min, then held for 21 min at 220 °C; the sample injection volume was 1 μL in the HPLC-grade dichloromethane. Helium was used as carrier gas at a flow rate of 1.28 mL min−1 on the split mode (1:10). Individual components were identified by matching their mass spectra with literature, NIST database, and Adams’s libraries [49 ,50 ]. GC-MS chromatograms for n-hexane fractions of root and stem are shown in Supplementary Figure S8.
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5

GC-MS Analysis of Volatile Compounds

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A Shimadzu GC-MS 8040 equipped with SH-Rxi-5Sil MS capillary column (30 m, 0.25 mm i.d., 0.25 μm film thickness) and triple quadrupole mass spectrometer was used (Japan). The helium of high purity (99.9999%) was the carrier gas at a flow rate of 1 mL·min−1. Samples were injected in a split mode with a ratio of 10 : 1. The temperature procedure of the column was set at 70°C for 3 min, increased to 80°C at a rate of 10°C·min−1, to 100°C at a rate of 20°C·min−1, to 130°C at a rate of 2°C·min−1, and to 280°C at a rate of 20°C·min−1, and maintained for 2 min. An electron ionization system was used with ionization energy of 70 eV. Injection, interface, and ionization temperature were set at 250°C, 250°C, and 230°C, respectively. We used standard compounds of each volatile under the MRM mode to assay the contents of four target components [20 ].
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6

Phytochemical Profiling of CR Extracts

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Shimadzu (QP2020) instrument integrated with a mass spectrometer was used to perform gas chromatography-mass spectrometry (GC-MS) analysis for different solvent extracts of CR. In brief, 100 µL of the filtrate was suspended in 900 µL of respective solvents (ethanol, methanol, acetone, ethyl acetate, hexane and petroleum ether). To eliminate the impurities, the mixture was filtered by a syringe filter (0.25 μM). Then, the filtered samples were injected into Shimadzu (QP2020) GC-MS instrument equipped with 30 m long SH-Rxi-5Sil-MS capillary column (0.25 µm film thickness and 0.25 mm inner diameter) by auto injector in 1:10 split ratio. The inlet temperature program was at 50 °C initially and it was increased gradually (6 °C /min) up to 280 °C. Injector temperature was maintained at 250 °C, pressure at 68.1 kpa and helium was used as a carrier gas with 1.2 mL/min flow rate (linear velocity of 39.7 cm/s). The ionization energy of 70 eV was used to perform ionization in an electron impact mode at 200 °C. The results obtained for CR extracts were compared with the standard mass spectra (NIST 2005 MS collection) libraries. The relative percentage of each compound was determined by calculating the average peak area to total area ratio.
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7

Phytosterol Content Determination by GC-MS

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Phytosterol content was determined using a gas chromatography-mass spectrum system (Thermo Fisher, USA) equipped with an FID, as described in Jin et al. with some modifications.26 In brief, 1 μL of the prepared sample was injected into the gas chromatograph and separated by an SH-Rxi-5Sil MS capillary column (30 m × 0.25 mm × 0.25 μm, Shimadzu, Japan). The initial column temperature was set at 180 °C for 1.0 min, then increased to 300 °C at a rate of 4 °C min−1 and maintained for 15 min. The injector temperature was 290 °C. Carrier gas (helium) was injected at 0.7 mL min−1 and the split ratio was 1 : 80. In addition, the ion source temperature was 250 °C. The internal standard method is used for quantification.
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