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7 protocols using zf 0313

1

Comprehensive Antibody Validation Workflow

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Antibodies used and the sources are as follows: NFIB (ab186738, 1:1000 for WB), ORC1 (ab85830, 1:1000 for WB), CDC6 (ab188423, 1:1000 for WB), CDT1 (ab70829, 1:1000 for WB), MCM5 (ab76023, 1:1000 for WB), MCM6 (ab201683, 1:1000 for WB), MCM7 (ab52489, 1:1000 for WB), PCNA (ab29, 1:2000 for WB), H3 (ab1791, 1:2000 for WB) and BrdU (anti-CldU, ab6326) from Abcam; MCM2 (3619, 1:1000 for WB) from Cell Signaling Technology; ΟRC2 (sc-32734, 1:500 for WB), Geminin (sc-74456, 1:1000 for WB), POLD1 (sc-17776, 1:1000 for WB) and β-actin (sc-47778, 1:2000 for WB) from Santa Cruz Biotechnology; MCM4 (13043-1-AP, 1:1000 for WB), Cyclin E1 (11554-1-AP, 1:1000 for WB) and MCM3 (A1060, 1:1000 for WB) from Abclonal; NFIB (A303-566A, for CUT&Tag) and ORC1 (A301-892A, for CUT&Tag) from Bethyl Laboratories; c-myc-Tag (B1022, 1:2000 for WB), HA-Tag (B1021, 1:2000 for WB) and GAPDH (B1034, 1:2000 for WB) from Biodragon. FITC or TRITC-conjugated secondary antibodies (ZF-0311, ZF-0312, ZF-0316, ZF-0313, 1:100 for IF) from ZSGB-BIO.
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2

Mapping Piezo1 and c-Fos in Hippocampus

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Mice were transcardially perfused with PBS and then 4% paraformaldehyde after deep anesthesia. Brains were removed and fixed in 4% paraformaldehyde at 4 °C for 24 h. Then the brain slices were made from coronal sections at 30 μm using a cryostat microtome (CM3050S, Leica, Weztlar, Germany). After blocking with normal goat serum (including 0.3% Triton X-100 in PBS) for 1 h at room temperature, the slices were incubated with mouse anti-c-Fos (1:100, ab208942, Abcam, Cambridge, UK) and rabbit anti-Piezo1 (1:100, DF12083, Affinity Biosciences, Zhenjiang Shi, China) at 4 °C overnight. Then the slices were incubated with TRITC-labeled goat anti-mouse (1:200, ZF-0313, ZSGB-Bio, Beijing, China) and FITC-labeled goat anti-rabbit (1:200, ZF-0311, ZSGB-Bio, Beijing, China) secondary antibodies for 1 h at room temperature, stained with DAPI for 10 min at room temperature, and mounted in 70% glycerol. Finally, the slices were imaged using a virtual microscopy slide-scanning system (VS 120, Olympus, Tokyo, Japan). Images of sections containing the dorsal hippocampus were cropped and analyzed using Image J software (V1.48, NIH, Bethesda, MD, USA, 2014).
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3

Protein Expression Analysis by Western Blot

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Western blot was performed as previously described (Wang et al., 2020 (link)). Shortly, proteins were separated by SDS-PAGE and were electrically transferred to PVDF membrane (Millipore, Billerica, United States). The membranes were blocked for 4 hour with 5% (w/v) skim milk, then incubated with primary antibodies against human CD9 (#AF5139, affinity, United States), CD63 (#AF5117, affinity, United States), ICAM-1 (10831-1-AP, Proteintech, China) and anti-β-actin (#ZF-0313, ZS Bio, China) overnight, and incubated with second antibodies goat anti-mouse or anti-rabbit IgG. Membranes were visualized with enhanced chemiluminescence detection.
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4

EMT Markers and STC2 Expression

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The expression of STC2 and EMT markers was observed in cultured EMT cells by an immunofluorescence microscopy. Cells grown on coverslips, which were performed in a 96-well plate, were fixed with paraformaldehyde for 30 min. After fixation, cells were washed with TBST twice and blocked in 1.5% BSA/TBST for 1 h at room temperature. Cells were respectively incubated with primary antibodies against STC2 (1:500, sc-14350, Santa Cruz), vimentin (1:500, sc373717, Santa Cruz), E-cadherin (1:500, sc-31021, Santa Cruz), N-cadherin (1:500, sc-31031, Santa Cruz) and twist (1:500, sc-81417, Santa Cruz) overnight at 4°C. Then cells were incubated with TRITC-conjugated secondary antibodies (ZF-0313, ZSGB-BIO) and FITC-conjugated ones (ZF-0314, ZSGB-BIO) for 1 h and stained with DAPI for 5 min. The images were viewed and recorded by Olympus BX40 and SPOT Flex (Diagnostic Instruments, Version 4.5).
To block ERK, PI3K signaling, 10 μM ERK inhibitor U0126 (#S1901, Beyotime) or 10 μM PI3K inhibitor LY294002 (#9901, Cell Signaling Technology) was respectively incubated with NCM460, EMT cells for 24 h to directly observe expression strength of STC2 and EMT markers. Other procedures were same as the above.
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5

Immunofluorescence Staining of LIN41 and Flag

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The cells were cultured on glass coverslips in 24-well plates, fixed with 4% paraformaldehyde for 15 min, and then permeabilized with 0.1% Triton X-100 for 10 min. After washing with PBS, cells were blocked with nonimmune goat serum for 30 min at 25°C and then incubated with LIN41 antibody (SC-134793; 1:100 dilution; Santa Cruz Biotechnology) or anti-Flag antibodies (HT201; 1:100 dilution; Transgen BioTech) overnight at 4°C. Cells were then incubated with rhodamine (TRITC)-conjugated goat anti-mouse antibodies (ZF-0313; 1:100 dilution; ZSGB-BIO), counterstained with DAPI, and mounted.
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6

BHK-21 Cells Infection Evaluation

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BHK-21 cells were grown on coverslips in 35 mm diameter dishes and infected with rL, rL-RVG, or rL-RVGTM at a multiplicity of infection (MOI) of 0.1. At 24 h post-infection, productive infection levels were evaluated by using a 1:100 dilution of dog serum against RV or a 1:3,000 dilution of mouse monoclonal IgG1 against NDV HN antibody (sc53563; Santa Cruz Biotechnology, USA) along with a 1:200 dilution of fluorescein isothiocyanate (FITC)-conjugated rabbit anti-dog antibody (F7884; Sigma, USA) or a tetramethyl rhodamine isocyanate (TRITC)-conjugated goat anti-mouse antibody (ZF-0313; ZSGB-BIO, China), as described previously [26 (link)].
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7

Immunohistochemical Analysis of TRAIL-MSCs

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After the imaging procedures, the solitary xenograft tumors were fixed in 4% buffered formalin. Hematoxylin and eosin (H&E) staining was performed on serial sections of 4 μm intervals for histological examination. The surface and inner samples from these samples were frozen and sectioned to detect TRAIL and EGFP expression, as previously described [28 (link)]. The sections were blocked with normal goat serum for 30 minutes (Zli-9021, ZSGB-BIO, Beijing) and then incubated simultaneously with a 1:100-diluted polyclonal rabbit anti-TRAIL primary antibody (AB2435, Abcam, U.S.A.) and a 1:20-diluted polyclonal mouse anti-EGFP primary antibody (AB16278, Abcam, U.S.A.). Our detection of TRAIL-MSCs was based on incubation with a FITC-conjugated goat anti-rabbit secondary antibody (ZF0311, ZSGB-BIO, Beijing) and a rhodamine-conjugated goat anti-mouse secondary antibody (ZF0313, ZSGB-BIO, Beijing).
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