The largest database of trusted experimental protocols

Sybr rapid quantitative pcr kit

Manufactured by Roche
Sourced in United States

The SYBR® rapid quantitative PCR Kit is a laboratory equipment product designed for the rapid and accurate quantification of DNA or RNA samples using real-time PCR technology. It utilizes the SYBR® Green chemistry to detect and measure the amplification of target sequences during the PCR process.

Automatically generated - may contain errors

5 protocols using sybr rapid quantitative pcr kit

1

Transcriptomic Analysis of m6A Pathway in Poplar

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA of leaves, roots, xylem and phloem from Poplar 84K and LBD15-oe plants were isolated by RNA Easy Fast Plant Tissue Kit (TIANGEN, Beijing, China). The cDNA was generated by reverse transcription using FastKing RT Kit (TIANGEN, Beijing, China). The qRT-PCR analysis of m6A pathway genes were performed with SYBR® rapid quantitative PCR Kit (KAPA KK4601, Pleasanton, CA, USA) using the methods described previously [35 ]. Pagactin was used as a reference [24 (link)]. The primers of all the genes were listed in Table S5, and the results were analyzed using the 2−ΔΔCt method [24 (link)].
+ Open protocol
+ Expand
2

Isolation and Quantification of Total RNA from Taxus chinensis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from the tissues of T. chinensis using the EASYspin plant total RNA isolation kit (Aidlab RN38, Beijing, China). RNA integrity and quantity were determined by 1.2% agarose gel electrophoresis and NanoDrop 1000C spectro-photometer (Thermo Scientific, Waltham, MA, USA). Reverse transcription was performed using the FastKing RT Kit (with gDNase) (TIANGEN, Beijing, China). The qRT-PCR are performed with SYBR® rapid quantitative PCR Kit (KAPA KK4601, Pleasanton, CA, USA). Primers used for qRT-PCR are listed in Table S1. Tcactin was used as a reference gene as described previously [16 ]. Gene expression levels were calculated according to the 2-∆∆Ct method for the different tissues and aged xylem samples [17 (link),18 (link)].
+ Open protocol
+ Expand
3

Transcriptomic Analysis of TcMYB Genes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from the tissues preserved in liquid nitrogen using the RNA extraction kit RN38 (Aidlab Biotech, China). RNA integrity was identifed with a 1.2% agarose gel, and RNA quantity and quality were determined by NanoDrop 1000C Spectro-photometer (Thermo Scientific, USA). The cDNA was obtained by reverse transcription of total RNA using the FastKing RT Kit (With gDNase) KR116 (TIANGEN, China) and used for qRT-PCR by SYBR® rapid quantitative PCR Kit (KAPA KK4601, USA). Gene-specific primers are listed in Table S2 with products lengths between 100 bp and 300 bp. Tcactin was used as a reference gene. Relative abundance of TcMYBs were calculated according to the comparative Cq method described in previous study (Li & Lu, 2014 (link); Ma et al., 2012 (link)). The expression levels of miR159, miR828 and miR858 were analyzed using the method as described previously (Shi & Chiang, 2005 (link)). One-way ANOVA was calculated using IBM SPSS 19 software. P < 0.01 was considered statistically significant and was represented by asterisks. The heat maps of differential expression of TcMYB genes were performed using HemI 1.0 with gradient bar (Clustering Method is Average linkage and Similarity Metric is Pearson distance (default)) (Deng et al., 2014 (link)).
+ Open protocol
+ Expand
4

Quantifying Mitochondrial Biogenesis in Heart Cells

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA was isolated from heart tissues and H9c2 cells with Trizol reagent, and was reverse-transcribed into cDNA using RevertAid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific, Waltham, MA). Real-time PCR assays were performed using SYBR rapid quantitative PCR Kit (Kapa Biosystems, Woburn, MA) [33 (link)]. The relative miRNA levels were determined by normalizing to U6 level.
To assess the mitochondrial biogenesis, the ratio of mitochondrial to genomic DNA was used. Real-time PCR was carried out with different primers (Additional file 1: Table S4). 18S ribosomal DNA was used to represent genomic DNA; 18S ribosomal DNA and COI was used to represent mitochondrial DNA.
+ Open protocol
+ Expand
5

Quantitative PCR Analysis of miRNA

Check if the same lab product or an alternative is used in the 5 most similar protocols
RNA was isolated from pancreatic islet or INS1 cells with TRIzol reagent (Invitrogen, Carlsbad, CA), and then was reverse-transcribed into cDNA using RevertAid First Strand cDNA Synthesis Kit (Thermo Fisher Scientific, Waltham, MA). Real-time PCR assays were performed using SYBR rapid quantitative PCR Kit (Kapa Biosystems, Woburn, MA)13 (link). The relative miRNA levels were determined by normalizing to U6 level using 2-ΔΔCT method. Primers were list in Table S2.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!