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C-Cbl is a protein that functions as an E3 ubiquitin-protein ligase, which is responsible for the ubiquitination and subsequent degradation of target proteins. It plays a role in the regulation of various cellular processes, such as receptor tyrosine kinase signaling and endocytosis.

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7 protocols using c cbl

1

Western Blot Protein Analysis Protocol

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Cells were harvested by centrifugation at 120 g for 5 minutes in a microfuge. The pellets were washed with PBS and lysed with mammalian protein extraction reagent (Pierce) with protease and phosphatase inhibitors (Sigma). The lysates were frozen at −80°C overnight and defrosted on ice, then cleared by centrifugation at 16 060 g for 10 minutes at 4°C. The supernatants were collected, and protein concentrations were determined with the Pierce BCA Protein Assay (Thermo Fisher Scientific). Equal amounts of total protein lysates (30 μg) were resolved by SDS‐PAGE, electrotransferred onto PVDF membranes, probed with antibodies, and detected with ECL reagent (GE Healthcare). The antibodies used for western blots are as follows: IRF‐1 was from BD Biosciences (San Jose, CA); GAPDH, c‐Raf, Lyn, Fgr, p47phox, Slp‐76, Vav1, PU.1, horseradish peroxidase anti‐mouse, and anti‐rabbit antibodies were from Cell Signaling (Danvers, MA); and c‐Cbl was from Santa Cruz Biotechnology (Santa Cruz, CA). The relative intensity of specific band was calculated against GAPDH using ImageJ software.
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2

Osteoclastogenesis Regulatory Proteins

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Antibodies against the following proteins were used in this study: DOK3, C-Cbl, and Grb2 were from Santa Cruz Biotechnology (Santa Cruz, CA, USA); Phospho-ERK (pThr202/pTry204), ERK (pan ERK), Phospho-p38 MAPK (Thr180/Tyr182), p38 MAPK (pan p38 MAPK), Phospho-Syk (Tyr525/526), Syk (panSyk), IκBα, cyclin D1 antibody were from Cell Signaling Technology (Danvers, MA, USA) ; Anti-phosphotyrosine monoclonal antibody G410 was purchased from EMD Millipore (Billerica, MA, USA). TRAP staining kit was purchased from Sigma (St. Louis, MO, USA). Phospho-Dap12 rabbit antibody was previously described (6 (link)). Murine M-CSF and RANKL were obtained from Peprotech (Rocky Hill, NJ, USA). The enhanced chemiluminescence (ECL) was purchased from Thermo Scientific (Rockford, IL, USA). Tissue culture media and fetal bovine serum (FBS) were obtained from Life Technologies (Grand Island, NY, USA). MTT (3-(4, 5-dimethylthiazole-2-yl)-2, 5-dipenyltetrazolium bromide) cell proliferation assay kit was obtained from ATCC (Manassas, VA, USA).
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3

Western Blot Analysis of Cell Signaling

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The western blots were performed as previously described [35 (link)]. The antibodies used for western blots: anti- CD38 was from BD Biosciences (San Jose, CA), GAPDH, c-Raf, Phospho-c-Raf (S259), Mek, p-Mek, Erk, p-Erk, FAK, Lyn, Fgr, p47phox, Slp-76, Vav1, pY416-c-Src, horseradish peroxidase anti-mouse, and anti-rabbit antibodies, were from Cell Signaling (Danvers, MA), p-Tyr and c-Cbl antibodies were from Santa Cruz Biotechnology (Santa Cruz, CA), Phospho-c-Raf (S621) was from Thermo Fisher Scientific (Waltham, MA).
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4

Western Blot Analysis of Signaling Proteins

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Total cell lysate (25 µg protein) was resolved by SDS-PAGE analysis [30 (link)] using 12% acrylamide gels. Antibodies for western blotting were anti-: c-Raf pS259 (polyclonal), c-Raf pS289/296/301 (polyclonal), VAV1 (polyclonal), Lyn (clone C13F9), SFK pY416 (polyclonal), LCN2 (clone D4M8L), MMP9 (clone D6O3H), Smad2 pS245/250/255 (polyclonal), GAPDH (clone D16H11), HRP anti-mouse, and HRP anti-rabbit (Cell Signaling, MA, USA), c-Raf pS621 (polyclonal) (Thermo Fisher), c-Raf (clone 53) and CD38 (clone 22) (BD Pharmingen, San Jose, CA, USA), c-Cbl pY674 (clone EPR2227) (Abcam, MA, USA) and c-Cbl (polyclonal) (Santa Cruz, CA, USA). All antibodies were diluted 1:1000.
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5

Integrin Signaling and Fatty Acid Modulation

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Primary antibodies against integrin β1 was from Cell signaling. Antibodies against integrin α4, iNOS, c-Cbl, ubiquitin, and β-actin were from Santa Cruz Biotechnology. 1400W, MG132, NAC, bovine serum albumin, PTIO, oleic acid, palmitic acid, and SNP were from Sigma-Aldrich. Granulocyte-macrophage colony-stimulating factor was from MedChemExpress. CHX was purchased from Selleck Chemicals. GSNO was synthesized from glutathione. To prepare the FFA mixture, oleic acid, and palmitic acid (2:1) were emulsified in PBS containing 1% bovine serum albumin.
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6

Molecular Pathways in Cholangiocarcinoma and Pancreatic Cancer

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SCK human cholangiocarcinoma cells and PANC-1 human pancreatic cancer cells were cultured in Roswell Park Memorial Institute (RPMI)-1640 medium. The SCK cells were procured from Dr. Dae-Ghon Kim of Chonbuk National University Medical School and Hospital (Jeonju, South Korea). The PANC-1 cells were purchased from the American Type Culture Collection (Manassas, VA, USA). The cells were maintained in a humidified incubator at 37 °C in an atmosphere containing 5% CO2. Antibodies against EGFR, phospho-EGFR, PI3K, PDK, phospho-PDK, AKT, phospho-AKT, GSK3β, phospho-GSK3β, ERK, phospho-ERK, cyclin B1, vimentin, and GAPDH were obtained from Cell Signaling Technology (Danvers, MA, USA). CD-31 and VEGF were purchased from Abcam (Cambridge, MA, USA). HIF-1α, VEGFR2/FLK-1, p53, p21, cyclin D1, E-cadherin, N-cadherin, snail, c-CBL, and RAS were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA).
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7

Plasmid Construction and Antibody Usage

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cDNAs for c-Cbl and its isoforms were inserted into pFlag-CMV2 or pcDNA-HisMax. A c-Cbl mini-gene construct was generated by inserting a fragment (6868 bp) of the c-Cbl gene in C6 cells (i.e., the region from exon-7 to exon-11 including introns) into pFlag-CMV2 and then by fusing green fluorescent protein (GFP) cDNA to the 3′-end of exon-11. All primers were purchased from Bioneer (Daejeon, Korea).
Antibodies against Flag (Sigma, St Louis, MO), Xpress (Invitrogen, Grand Island, NY), hemagglutinin (HA) (Roche, Pleasanton, CA), c-Cbl (Santa Cruz Biotechnology, Dallas, TX), extracellular signal-related kinase (ERK) (Cell Signaling Technology, Boston, MA), and phospho-ERK (pERK; Cell Signaling Technology) were used. Peroxidase-conjugated goat anti-rabbit and anti-mouse IgGs were purchased from Jackson ImmunoResearch Laboratories (West Grove, PA). An anti-αPix antibody was generated as previously described [8] (link).
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