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5 protocols using anti e2f1 sc 251

1

ChIP Analysis of MA-linc1 Promoter

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DNA–protein complexes were immunoprecipitated from U2OS cells using the ChIP (chromatin immunoprecipitation) assay kit (Upstate Biotechnology) according to the manufacturer’s protocol with the following antibodies: anti-E2F1 (sc-251; Santa Cruz Biotechnology) and anti-IgG (111-035-144, Jackson Immunoresearch). anti-IgG served as a control for nonspecific DNA binding. The precipitated DNA was subjected to RT- PCR analysis using specific primers corresponding to the estimated human MA-linc1 promoter (5′-GGGCTGAGGAGGAAGGAG-3′ and 5′- GACGTCGCCTGGAGTCAC -3′) as well as primers for β-actin, which served as a negative control (5′-ACGCCAAAACTCTCCCTCCTCCTC-3′ and 5′-CATAAAAGGCAACTTTCGGAACGGC-3′).
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2

Protein Extraction and Western Blot Analysis

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Protein extraction and western blots were performed as previously described [47 (link)]. Protein concentration was detected with Bradford method. The antibodies used were: anti-E2F1 (sc-251, Santa Cruz Inc), anti-ATM (sc-23921, Santa Cruz Inc), anti-PARP (9532, Cell Signaling), anti-Caspase-3 (9662, Cell Signaling) anti-β actin (sc-47778, Santa Cruz Inc), anti-vinculin (sc-73614, Santa Cruz Inc).
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3

Western Blot Analysis of E2F1, Actin, and SPNS2

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Cell pellet preparation and western Blot analysis were performed as previously described [27 (link)]. The membrane was incubated with one of the following primary antibodies: anti-E2F1 (sc-251, Santa Cruz Biotechnology); anti-Actin (sc-1616r; Santa Cruz Biotechnology); anti-SPNS2 (catalog no. SAB1304232).
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4

Western Blot Analysis of Protein Expression

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Cell lysates (50 μg) were separated by 10% SDS/PAGE. The proteins were transferred to nitrocellulose membrane. After being blocked in 5% milk (w/v) at room temperature for 1 h, the membranes were incubated at 4 °C overnight with primary antibodies (1:1000). Following 1 × PBST washing, the membranes were incubated with secondary antibodies (1:3000) at room temperature for 1 h followed by ECL staining. The following antibodies were applied: anti-p27 (sc-776, Santa Cruz), anti-Cyclin D1 (sc-20,044, Santa Cruz), anti-E2F1 (sc-251, Santa Cruz), anti-Ago2 (04–642, Millipore), anti-Socs1 (ab62584, Abcam) and anti-β-actin (sc-47778, Santa Cruz).
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5

Transcriptional Regulation via E2F and RRM2

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HCT116 cells were cultured in DMEM supplemented with 10% FBS. H460 cells were cultured in RPMI 1640 supplemented with 10% FBS. U2OS cells were cultured in McCoys 5A media supplemented with 10% FBS. HEK293T cells were cultured in DMEM supplemented with 10% heat inactivated FBS. For HG treatments, cells were exposed to 25mM glucose (Boston BioProducts) for 6 h or as indicated. To inhibit E2F activity, cells were treated with 40 μM pan-E2F inhibitor HLM006474 (Sigma-Aldrich) for 9 h (Y. Ma et al., 2008 (link)). To inhibit RRM2 activity, HCT116 cells were treated with 250 or 500 nM Triapine (Selleck Chemicals) as described (Lin et al., 2011 (link)). To inhibit pRB S807/811 phosphorylation, HCT116 cells were treated with 1μM PF-3600 (PF-06873600, Cayman Chemical) as indicated (Freeman-Cook et al., 2021 (link)).
The following antibodies were used for IB: anti-Vinculin (V9131, Sigma-Aldrich), anti-RRM2 (sc-398294, Santa Cruz), anti-E2F1 (sc-251, Santa Cruz), anti-CHAF1A (sc-133105, Santa Cruz), anti-Rb1 (#9309, Cell Signaling Technology), anti-phospho Rb1 (S807/811) (#8516, Cell Signaling Technology) and anti-b-actin (A3854, Millipore Sigma).
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