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2 protocols using rabbit antibodies

1

Antibody Sourcing for Mitophagy Pathway

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Rabbit antibodies against embryonic stem cell-expressed Ras (ERAS) and phospho-parkin (Ser65) were obtained from Biorbyt (St. Louis, MO, USA). Rabbit antibodies against PHB1, optic atrophy 1 (OPA1), LC3, p62, total transcription factor EB (TFEB), phospho-TFEB (Ser211), optineurin (OPTN), PHB1, Tom 20, Calnexin, and HSP90 were obtained from Cell Signaling (Leiden, Netherlands). Rabbit anti-PINK1, goat anti- parkin, and mouse anti-PHB2, c-Myc and β-actin were from Santa Cruz Biotechnology (Dallas, TX, USA). Sheep anti-phospho-PINK1 (Thr257) was purchased from Ubiquigent (Dundee, SC, UK).
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2

Western Blot Analysis of KNL1 and GAPDH

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Cells and tissues were lysed using RIPA buffer (Thermo Fisher Scientific, Inc.). Lysates were electrophoresed by 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis (Thermo Fisher Scientific, Inc.) and transferred onto polyvinylidene difluoride membranes (Thermo Fisher Scientific, Inc.). After blocking for 1 hour in 5% skimmed milk, the membranes were incubated overnight at 4°C with rabbit antibodies against KNL1 (dilution, 1:500; Biorbyt Ltd.) and GAPDH (dilution, 1:800; Santa Cruz Biotechnology, Inc., Dallas, TX, USA), washed four times in TBST, and then incubated at room temperature for 1 hour with a horseradish peroxidase-conjugated secondary antibody (dilution, 1:10,000; catalog no., 323-065-021; Jackson ImmunoResearch, Inc., West Grove, PA, USA). Protein bands were visualized using a chemiluminescence system (Thermo Fisher Scientific, Inc.) according to the manufacturer’s protocol. The band intensities were quantified using Image-Quant Software v3.0 (LI-COR Biosciences, Lincoln, NE, USA). This experiment was repeated in triplicate.
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