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7 protocols using chemiscope 3000

1

Immunoblotting Protocol for Protein Analysis

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Electrophoresis conditions: the stacking gel was set at 80 V and the separating gel at 100 V. Following electrophoresis, proteins from the gel were transferred onto PVDF membranes (ISEQ00010/IPVH00010, Millipore, United States). Then the membrane was blocked with 5% bovine serum albumin (BSA) in TBST at room temperature for 2 h. It was then incubated with primary antibodies overnight at 4°C (Table 1). After washing thrice with TBST for 10 min each, the membrane was incubated with corresponding secondary antibodies (diluted 1:5,000) at room temperature for 2 h. Another three 10-min TBST washes were done, followed by an application of chemiluminescent reagent (mixed 1:1 of Solution A and B, 2 mL each) on the membrane. Protein bands were detected and captured using a chemiluminescence imaging system (Chemiscope 3000, Clinx, China). The relative expression level was calculated based on the absorbance ratio of the target gene band to the β-actin band.
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2

Protein Extraction and Detection in Rice Leaves

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Total proteins were extracted from 0.1 g of rice leaf tissue by grinding the tissue in a mortar with liquid nitrogen until a fine powder was created. The leaf powder was then homogenized in 700 μl of extraction buffer (125 mM Tris–HCl, pH 6.8, 5% [w/v] sodium dodecyl sulfate, 10% [v/v] glycerol, and 2% [v/v] 2-mercaptoethanol). Total proteins were separated by 12% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and transferred to a PVDF membrane (Merck Millipore). OsJMT1-HA protein was detected by immunoblotting with an HRP-conjugated anti-HA monoclonal antibody diluted 1:2000 (Roche). OsActin was used as a loading control and was detected using an anti-actin monoclonal antibody diluted 1:5000 (CWBIO). The chemiluminescent signal was visualized using a Western Lightning Plus-ECL (Edo Biotech) and imaged using the ChemiScope 3000 mini instrument (CLiNX).
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3

Evaluating p10/OA Complex Effects on Cell Markers

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HSC-T6 cells were plated in a six-well plate at a density of 5.0 × 10 5 cells per well and cultured overnight in an incubator. For 24 h, cells were treated with various molar ratios (8:16 and 8:20) of preformed p10/OA complex. After three times washing with cold PBS, cells were lysed using RIPA lysis buffer containing the protease inhibitor phenylmethylsulfonyl fluoride (PMSF). Equal quantities of protein (approximately 10-20 μg) were separated by 10% sodium dodecyl sulfate polyacrylamide gel (SDS-PAGE) and transferred to a polyvinylidene fluoride (PVDF) membrane. After blocking with 5% nonfat milk in TBST for 1 h, the PVDF membrane was incubated overnight at 4 °C with rabbit polyclonal α-SMA (Wanleibio; 1:1000) and mouse monoclonal COL1α2 primary antibody (Servicebio; 1:1000). Following TBST washes 3 times, the PVDF membrane was incubated for 1 h at room temperature with horseradish peroxidase conjugate secondary antibody (Santa Cruz biotechnology; 1:3000). The Clinx ChemiScope 3000 mini enhanced chemiluminescence (ECL) detection reagent was used to detect a chemical reaction light signal.
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4

Protein Expression Analysis in Rat Liver

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The concentration of protein extracted from rat liver using RIPA buffer was then determined using the BCA assay. SDSPAGE was employed to separate the proteins, followed by transfer onto a PVDF membranes. The membrane was then incubated with a blocking buffer containing 5% skimmed milk for 1 h, washed with TBST three times, and subsequently incubated overnight with primary antibodies including βactin (Sino Biological), Desmin (Boster), Tagln (Boster), Tpm2 (Sangon Biotech), Csrp1 (Sangon Biotech), and Myh11(Cusabio) at dilutions of 1:1000, 1:400, 1:500, 1:300, 1:500, and 1:300, respectively, at 4 °C. After washing three times with TBST, the membrane was incubated with secondary antibodies for 1 h, followed by staining. Results were visualized using a Chemiscope 3000 (Clinx Science Instruments Co., Ltd).
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5

Western Blot Analysis of UPR Proteins

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Cardiomyocytes in each group were collected and total proteins were extracted using RIPA RIPA Lysis and Extraction Buffer (AR0105, Boster Biological Technology, Wuhan, China), and the protein concentration was determined using Easy II Protein Quantitative BCA kit (DQ111-01, TransGen Biotech, Beijing, China). The OD values were measured at 562 nm, and the concentration of proteins were calculated with the standard curve. The protein samples were pre-processed using 5×SDS-PAGE loading buffer (with β-Mercaptoethanol) (C05-03001, Bioss, Beijing, China), isolated with electrophoresis (10% gel for eIF2α and GRP78; 12% gel for ATF4 and β-actin; 15% gel for CHOP, BCL-2 and BAX), and transferred to ploy membrane (0.45 um polyvinylidene fluoride PVDF membrane [IPVH00010, Millipore, the USA] for eIF2α, ATF4, GRP78 and β-actin; 0.22 um PVDF membrane [ISEQ00010, Millipore, the USA] for CHOP, BCL-2 and BAX). The membrane was blocked using blocking solution containing 5% skim milk for 1 h, and incubated with primary and secondary antibodies (Table S1). Mouse β-actin was used as the internal reference for other proteins. The protein bands were visualized using chemiluminescence kit (Chemiscope 3000, Clinx Science Instruments, Shanghai, China) to assess the expression levels of eIF2α, ATF4, CHOP, GRP78, BCL-2 and BAX in each group.
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6

Western Blot Analysis of Protein Expression

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After treatment shown above was over, cells were washed with PBS three times and were lysed with RIPA lysis buffer supplemented with the protease inhibitor (PMSF) and incubated on ice for 30 minutes. Supernatant was collected after centrifugation (12,000 rpm, 15 min), and protein concentration was determined by using the BCA protein assay kit according to the manufacturer's recommendations. The lysate was boiled with loading buffer and separated with 10% sodium dodecyl sulfate polyacrylamide gels (SDS-PAGE) and transferred to polyvinylidene fluoride (PVDF) membranes. After blocking with blocking buffer (5% skim milk powder in TBST (0.1% Tween 20 in Tris-buffered saline (TBST)) for 1 h, primary antibody 6 × HisTag (mouse polyclonal, Cell Signaling Technology, Boston, MA; 1:1000) was incubated overnight at 4 °C. After washing PVDF membrane three times with TBST, goat anti-mouse secondary antibody (Santa Cruz Biotechnology, Dallas, TX; 1:1000) coupled with horseradish peroxidase (HRP) was incubated for another 1 h at room temperature. Anti-β-actin-HRP (Santa Cruz Biotechnology, Dallas, TX; 1:1000) was used as a loading control. Chemical reaction light signal detection was performed using the Clinx ChemiScope 3000 mini enhanced chemiluminescence (ECL) detection reagent.
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7

Measuring Protein Expression in PI3K/Akt Pathway

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Western blotting was performed to measure the expression levels of critical proteins in PI3K/Akt signaling pathway in lung, liver and renal tissues. The total protein was extracted from the above tissues with radio immunoprecipitation assay (RIPA) lysis buffer (Boster Biological Technology Co. Ltd, China) and protein concentration was measured using BCA Protein Assay Kit (TransGen Biotech, China). The total protein was firstly isolated through sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred onto Immobilon-P membranes (Millipore co, USA). Blocking was conducted in Tris-buffered saline containing 0.1% Tween-20 and 5% skimmed-milk powder. Anti-mouse Bax (1:400), Bcl-2 (1:400), Caspase-3 (1:400), PI3K (1:400), AKT (1:500) and p-AKT (1:300) were purchased from Boster Biological Technology Co. Ltd and utilized as primary antibodies, and anti-mouse antibodies conjugated to HRP were utilized as secondary antibodies. The intrinsic quality control selected β-actin (Abmart, Shanghai, China, 1:1000). The bands were detected with the Chemiluminescence Imaging System (Chemiscope 3000, Clinx, Shanghai, China). The software of Image J was employed to evaluate the relative expression levels of proteins.
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