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28 protocols using image plus 2

1

Morphotype Identification of Honeybee Colonies

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The morphotype of the colonies was determined using the Fast Africanized Bee Identification System (FABIS I) [44 ]. The right forewings of 10 workers of each colony were detached, placed over transparent tape and mounted between two 24 × 50 mm coverslips. Each mount containing 10 forewings was scanned to obtain a digital image, which was used to measure the length of each wing using the Motic Image Plus 2.0 software to obtain the mean forewing length of the colony [42 ,45 ].
Honeybee colonies with an average forewing length ≥ 9.095 mm were classified as the European morphotype, colonies with an average length ≤ 8.950 mm were classified as the Africanized morphotype and the colonies with an average forewing length between 8.951 and 9.094 mm were classified as the Intermediate or Hybrid morphotype [44 ].
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2

Morphological Indices of Lily Plant Growth

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The growth indexes of each lily plant were recorded at 10, 15, 20, 25 and 30 days after treatment, and the leaves of the same leaf position were measured. The specific morphological indexes include leaf length, leaf width and leaf area using a centimeter-scale ruler. The thickness of blade, palisade tissue and spongy tissue were measured by Motic Image Plus 2.0 measuring software, and each structural parameter was the average value measured within 20 field of view.
CTR=ThicknessoffencetissueThicknessofleaf×100%
SR=ThicknessofspongytissueThicknessofleaf×100%.
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3

Bead Morphology and Particle Size Analysis

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The morphology of the wet and dried beads and the particle size of the dried beads were analysed using a Motic SMZ168 stereomicroscope and an image analysis software (Motic Image Plus 2.0). For each formulation, the particle size was calculated as the average value of the size of 20 dried particles.
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4

Quantifying Liver Vascularization in Fish

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For histomorphology, liver samples fixed in buffered PFA were dehydrated in ethanol crescent series, embedded in historesin (Leica, Wetzlar, Germany), and the sections (3 μm thickness) were stained with Toluidine blue and basic fuchsin. The slides were analyzed using an Olympus BX51 light microscope (Olympus, Ballerup, Denmark) equipped with a camera connected to a computer using Olympus DP2-BSW software (Version 2.2, Olympus, Ballerup, Denmark, 2008). For the quantification of liver vascularization, the total area occupied by the histological section and the total area occupied by the blood vessels (arteries and veins) were measured with the help of the image analysis software (Motic Image Plus 2.0, Motic China Group Co., Ltd., Hong Kong, China, 2006). The fractional area of the blood vessels was calculated through the ratio between the total area occupied by these vessels and the total area occupied by the histological section (six-eight non-contiguous fields/section/fish), multiplied by 100. The mean values for each fish were calculated and these values were used to determine the average of each experimental condition. The presence of histological alterations was also evaluated by a randomized blind method.
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5

Ileal Histology and Goblet Cells in Poultry

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Four birds per treatment were slaughtered and the medial region of the ileum was sampled for histology analyses. Samples were rinsed with sterile saline, immersed in buffered formalin for 24 hours and rinsed in 70% ethanol. Slides were mounted with 5μm sections and stained with hematoxylin-eosin. Two slides with five to seven sections were mounted per bird. Photomicrographs of the duodenal mucosa were taken using a digital camera with 12.1 megapixels (Sony Inc.) connected to a light microscope, with 1.7 optical zoom and 10X-objective. The images were analyzed with Image J software [19 ]. Villus height, crypt depth and villus:crypt ratio were determined. Villus height was measured from its apex to the basal region, crypt depth was measured from the crypt basis to the region of transition between the villus and crypt. For each animal, 30 measurements were taken, with a total of 120 measures per treatment per parameter. Ratio was calculated between villus height and crypt depth.
Goblet cell counts were performed in sections stained with Periodic Acid-Schiff (PAS) using a analysis software (Motic Image Plus 2.0, Motic, China) in 2000μm-linear segments of 12 repetitions per treatment (three photomicrographs from each of four slides).
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6

Quantifying Inflammation in Diabetic Bone

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Specimens from 4-week treatments were chosen for inflammation analysis since it reflects a period of active bone remodeling in this animal model and the inflammation level at this time affects bone formation more directly.22 In addition, it is well established that the primary inflammatory defect in bone associated with diabetes has prolonged, rather than acute, inflammation and affects bone formation at this time point.23 (link),24 (link) For these reasons, 4-week time point specimens were chosen to evaluate post-injury inflammation in diabetic animals. The presence of PMNs and MNCs reflect the overall level of inflammation and can be distinguished from other cell types based on their unique nuclear structure. PMNs were identified by their horse-shoe shaped nucleus and MNCs identified by their round and evenly dark nucleus. Approximately 4–10 representative fields evenly spaced in the area of new bone formation were examined to quantify PMNs and mononuclear cells expressed as the number per mm. The analysis excluded bone matrix, surrounding muscle, adipose tissue and hematopoietic tissue. Images were taken with 60× objective of a Motic BA120 microscope and analyzed using Motic Image Plus 2.0 (Motic, British Columbia, Canada). N = 5–8 for each treatment group.
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7

Quantifying Bone-Lining Osteoblasts

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A standard method was used to assess the number of bone-lining osteoblasts. Osteoblasts were identified by their cuboid morphology and their location, lining the bone edge (Supporting Information Fig. S2).25 (link) The number of bone-lining osteoblasts within the area of new bone formation were quantified and normalized by the length of bone to calculate osteoblast density. The length of bone covered by osteoblasts was also quantified and normalized by total bone length in area of new bone formation to calculate the percentage of bone that is undergoing bone formation. Images were taken with 60× objective of Motic BA120 microscope and analyzed using Motic Image Plus 2.0 (Motic, British Columbia, Canada). As osteoblasts cannot be clearly distinguished at lower power, only a high power representative image is shown. N = 5–8 for each treatment group.
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8

Histological Analysis of Bone Defect Healing

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Hematoxylin and eosin (H&E) staining (Sigma–Aldrich, Saint Louis, MO) was performed. The defect boundary position was identified based on the differing patterns of old bone and the newly formed bone. Specifically, older bone generally has a laminar pattrn, whereas newer bone is less well organized. A 2.5-mm length rectangle (representing half of the 5 mm defect) was then drawn to define the area of new bone formation (Supporting Information Fig. S1). Images were taken with a Motic BA210 microscope and analyzed using Motic Image Plus 2.0 (Motic, British Columbia, Canada).
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9

Polymer Surface Wettability Analysis

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Contact angle analysis, commonly applied to assess polymers surface energy, provided valuable information on the overall polymer wettability. The data are dependent on surface modifications (i.e., chemical composition, roughness, heterogeneity), which provide an indication of possible abiotic or biotic deterioration activities. Static contact angle measurements were performed by dropping 2 μL of Milli-Q water on the vacuum-dried polymer samples. Images were successively acquired by a home-made system that allowed translating the sample along the vertical and horizontal axis. Static contact angle was calculated by using the Motic Image Plus 2.0 software (Motic China Group Co.). The contact angles are the average of measurements carried out on three replicate analyses (three drops placed on three samples) at all the different immersion periods.
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10

Orthogonal Cutting of Cortical Bone Tissue

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The measuring system presented in Figure 5 was developed to carry out the full scope of the study of the orthogonal cutting process of cortical bone tissue. The tool movement during orthogonal cutting was performed using UMT Bruker tribotester (Billerica, MA, USA) drives equipped with a 3-axis motion system and high-resolution stepper motors drives. The DFM-20 two-axis force sensor measured the force with a range of 0.05 to 235 N. The following features characterize it: measuring resolution of 0.01 N, non-linearity of 0.02% and sampling frequency of 1000 Hz. It provides precise measurement of force, position in three axes and AE generated during cutting.
The Motic optical microscope (Hongkong, China) with a microscope camera ensuring image registration was used to observe the cutting process. A camera with a maximum resolution of 2048 × 1536 pixels was used. Pictures were taken during chip formation. In addition, microscopic measurements of the chips were carried out on dedicated software (Motic Image Plus 2.0, Motic, Hongkong, China).
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