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0.2 μm pore size nitrocellulose membrane

Manufactured by Bio-Rad
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The 0.2 μm pore-size nitrocellulose membranes are a type of lab equipment used for various applications. The membranes have a pore size of 0.2 micrometers, which allows for the effective separation and retention of small particles and molecules during filtration and blotting processes.

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9 protocols using 0.2 μm pore size nitrocellulose membrane

1

Western Blot Analysis of Extracellular Vesicle Markers

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Protein samples were separated by 4–12% Bis-Tris Gels (Invitrogen) and transferred to a 0.2 μm pore-size nitrocellulose membrane (Bio-Rad). The primary antibodies used were: rabbit polyclonal anti-TSG101 (1:1000, Bethyl Laboratories Inc., Cat# A303–507A, RRID:AB_10971167), rabbit polyclonal anti-CD63 (1:1000, Invitrogen, Cat# PA5–78995, RRID:AB_2746111), mouse monoclonal anti-human ALIX (1:2000, Bio-Rad PrecisionAb western blot validated, clone OTI1A4, VMA00273), sheep polyclonal anti-GM130/GOLGA2 (1:1000, R&D Systems Cat# AF8199-SP), rabbit anti-calnexin (1:2000, Sigma-Aldrich, Cat# C4731, RRID:AB_476845). The secondary antibodies conjugated with horseradish peroxidase were: donkey anti-rabbit IgG (1:10,000, GE Healthcare Cat# NA934, RRID:AB- 772206), sheep anti-mouse (1:10,000, GE Healthcare Cat# NA931, RRID:AB_772210), donkey anti-sheep (1:10,000, Jackson ImmunoResearch Laboratories, Inc., Cat# 713-035-003, RRID:AB_2340709), donkey anti-goat (1:10,000, Thermo Fisher Scientific Cat# A15999, RRID: AB_2534673). The pre-stained protein ladder was from Abcam (ab234592).
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2

Rubisco Protein Analysis by SDS-PAGE

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SDS-PAGE
was performed in duplicate under reducing conditions (10 mM β-mercapthoethanol)
on a Mini-Protean II system (Bio-Rad Laboratories, Hercules, CA, USA)
according to the manufacturer’s protocol. The PageRuler Plus
Prestained Protein Ladder (Thermo Fisher Scientific, Waltham, MA,
USA) was used as a molecular weight marker. Gels (Mini-Protean TGX)
were either stained with Instant Blue coomassie stain (Expedeon, San
Diego, CA, USA) or transferred to a 0.2 μm pore-size nitrocellulose
membrane (Bio-Rad Laboratories) for immunoblotting. Immunoblot assays
were carried out with standard reagents according to the protocol.
Rabbit polyclonal antibodies against the large subunit of Rubisco
(MBS715138, MyBioSource, San Diego, CA, USA) were detected with polyclonal
goat antirabbit immunoglobulins conjugated with horseradish peroxidase
(P0448, Dako, Carpinteria, CA, USA) using Clarity Western ECL (Bio-Rad
Laboratories) as a substrate. To reduce the influence of coprecipitated
soluble proteins in the insoluble fractions of the biomass, freeze-dried
aliquots of the pellet fractions were washed with a potassium phosphate
buffer (50 mM, pH 8.0) prior to analyzing them with SDS-PAGE.
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3

Immunodetection of Apolipoproteins via 1D-NDGGE

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The 1D-NDGGE was performed by a modification of the protocol described by Asztalos et al. (32 (link)). Briefly, samples were electrophoresed on a 4–30% polyacrylamide gradient gel and run at 150 V for 24 h at 4°C in a buffer containing 90 mM Tris, 80 mM boric acid, and 2.5 mM EDTA (pH 8.3). After electrophoresis, lipoproteins were transferred to a 0.2 μm pore size nitrocellulose membrane (BioRad, Mississauga, Ontario, Canada) at 12 V for 20 h at 4°C in a Tris-glycine buffer without methanol. After transfer, the membrane was blocked and immunodetection was performed with anti-apoA-I-HRP (monoclonal antibody 1/40, provided by F. Hoffmann-La Roche Ltd.) followed by enhanced chemiluminescence detection on Kodak Biomax film.
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4

Western Blot Analysis of Signaling Proteins

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Ending the culture, cells were harvested, washed in PBS, and lysed in RIPA buffer containing protease inhibitor (Complete Mini Protease Inhibitor Cocktail Tablet, Roche). Cellular protein extracts were separated by SDS-PAGE and transferred to 0.2 μm pore-size nitrocellulose membranes (Bio-Rad Laboratories, Hercules, CA, USA) with 25 mm Tris-base (pH 8.0) containing 150 mm glycine and 20% (volume/volume) methanol as previously described [28 (link)]. Membranes were incubated with antibodies to phospho-p44/42 MAPK (ERK1/2), phospho-nuclear factor kappa-light-chain-enhancer of activated B cells (NFκB p65), phospho-apoptosis signal-regulating kinase 1 (ASK1) (Ser967) (from Cell Signaling Technology), rabbit polyclonal anti-iNOS (Calbiochem Merck), and anti-caspase-1 (clone 5B10) (BioLegend). Protein bands were detected by incubating with horseradish peroxidase-labeled antibodies and visualized with enhanced chemiluminescence reagent (Advantas) using an ImageQuant Las-4000 mini (GE Healthcare Life Science). Band densities were analyzed by densitometry using the online IMAGEJ 1.39c software (National Institutes of Health) (http://rsb.info.nih.gov/ij/index.html) as described by Luke Miller (http://www.lukemiller.org/journal/2007/08/quantifying-western-blots-without.html). Samples were normalized using tubulin as loading control.
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5

Protein Immunoblot Transfer and Detection

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After SDS‐PAGE, the gels were processed for immunoblotting using Trans‐Blot Turbo Transfer System (BioRad, Hercules, California, USA) and 0.2 μm pore‐size nitrocellulose membranes (BioRad). Immunoblot detection was done with Western Lightning ECL Pro (Perkin Elmer, Winter St. Waltham, Massachusetts, USA), and a ChemiDoc XRS + system (BioRad) or exposure to Amersham Hyperfilm ECL (GE Healthcare).
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6

Western Blot Analysis of Liver Proteins

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Liver homogenates not used for the liver triglyceride analyses were spun at 17,000 rpm for 15 minutes at 4°C and the supernatant was collected. Total protein was quantified using a Pierce BCA kit (ThermoFisher Scientific, Waltham, MA, USA). Proteins were separated on Any kD Criterion TGX Stain-Free gels (Bio-Rad, Hercules, CA, USA) at 75V for 150 minutes in running buffer (Cell Signaling). Protein was then transferred to 0.2 μm pore-size nitrocellulose membranes (Bio-Rad) at 75V for 90 minutes on ice. Both primary antibodies utilized have been commercially validated and include SCD1 (Cell Signaling; 1:1000) and GAPDH (Abcam, Waltham, MA, USA; 1:2500). Primary antibody detection was performed with IRDye 800CW Infrared Rabbit antibody (LI-COR Biotechnology, Lincoln, NE, USA) at a concentration of 1:15000. Imaging was done on an Odyssey Fc Imaging System (LI-COR Biotechnology) protein quantification was performed using Image Studio Software (LI-COR Biotechnology).
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7

Quantitative Western Blotting of Amyloid Precursor Protein

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Western blots were performed as previously described (Kim et al. 2012 (link)). Protein concentration of cell lysates was determined by BCA protein assay (Thermo Fisher). Equal amounts of total protein for each lysate were separated on 4–20 % TGX (Tris-Glycine eXtended) gels (Bio-Rad) and transferred to 0.2 μm pore size nitrocellulose membranes (Bio-Rad). For Aβ detection, same volumes of media were run on 16.5% Tris-Tricine gel (Bio-Rad). After transferring, membranes were boiled for 10 minutes in PBS, as previously reported (McGowan et al. 2005 (link)). All membranes were blocked with 4% non-fat dry milk in TBS/T (Tris buffered saline with 0.125% Tween-20). Blots were probed with rabbit anti-APP antibody (Invitrogen), rabbit anti-BACE1 antibody (D10E5, Cell Signaling Technology), mouse anti-Aβ antibody (82E1, IBL International), rabbit anti-sAPPβ antibody (IBL International), rabbit anti-GAPDH antibody (FL-335, Santa Cruz Biotechnology), or mouse anti-actin antibody (Sigma) at room temperature for 1 h. Anti-APP antibody (Invitrogen) was used for CTFα and CTFβ detection. 6E10 (Covance) antibody was used for sAPPα detection. After secondary antibody incubation, membranes were developed using Lumigen TMA-6 ECL detection kit (Lumigen).
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8

Enzyme-Linked Immunosorbent Assay Development

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SO and CHA powders were purchased from Sigma-Aldrich Co., LLC (Tokyo, Japan). Horseradish peroxidase (HRP)-labeled goat anti-rabbit polyclonal IgG (H + L) antibodies were obtained from Funakoshi Co., Ltd. (Tokyo, Japan). Commercial serum and urine samples of healthy volunteers were obtained from Cosmo Bio Co., Ltd. (Tokyo, Japan). Bio-Safe Coomassie stain, Clarity Western ECL substrate kits, Precision Plus Protein Dual Color Standards, Trans-Blot Transfer Packs, and 0.2 μm pore-size nitrocellulose membranes were obtained from Bio-Rad Laboratories, Inc. (Hercules, CA, USA). A 96-well ELISA plate H was purchased from Sumitomo Bakelite Co., Ltd. (Tokyo, Japan). An HRP labeling kit was obtained from Dojindo Laboratories (Kumamoto, Japan). Blocking One and dimethyl sulfoxide (DMSO) were purchased from Nacalai Tesque, Inc (Kyoto, Japan). The Prominence LC-2010 HPLC system and the reversed-phase chromatography (RPC) column Shim-pack GIST C18-AQ were purchased from Shimadzu Corporation (Kyoto, Japan). Freund’s complete adjuvant (FCA), Freund’s incomplete adjuvant (FIA), o-phenylenediamine dihydrochloride (OPD) tablets, 2-mercaptoethanol (2-ME), and all other reagents were obtained from Wako Pure Chemical Industries, Ltd. (Tokyo, Japan) and Wakenyaku Co., Ltd. (Kyoto, Japan).
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9

Protein Extraction and Western Blot Analysis

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Total proteins were extracted from 50mg of frozen shoots using 200 μl of solution [50mM TRIS, 2mM EDTA, 10% (v/v) glycerol, and 10mM 2-merceptoethonal, pH 8.0]. The homogenates were centrifuged at 16 099 g for 3min at 4 °C. The supernatant was analysed by western blot analysis. The total protein concentration was determined by a nanodrop 2000 spectrophotometer (Thermo Scientific). A 10 μg aliquot of crude proteins was separated on 12% Criterion XT Bis-Tris gels (Bio-Rad), electrophoretically transferred to 0.2 μm pore-size nitrocellulose membranes (Bio-Rad), and blocked with PBST [8mM K2HPO4, 3.9mM KH2PO4, 150mM NaCl, and 0.05% (v/v) Tween-20, pH 7.2] containing 5% skim milk. The blocked membrane was then incubated with 20 μg of anti-GS serum (rabbit IgG) in 20ml of PBST at 4 ºC overnight. After several washes with PBST, the membrane was incubated at room temperature for 2h with horseradish peroxidase-conjugated goat anti-rabbit IgG (1:10 000) (Thermo Scientific), and the immune complexes were detected using chemiluminescence reagents.
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