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156 protocols using calcein am

1

Antibody-dependent Cellular Cytotoxicity Assay

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Antibody‐dependent cellular cytotoxicity was measured with a calcein AM release assay as described previously.14 Briefly, for ADCC activity, target cells were labeled with 10 μg/mL calcein AM (Dojindo) for 30 minutes at 37°C, washed three times with complete medium, and further incubated for 1 hour at 37°C. Labeled target cells (5 × 104 cells) and effector cells were then cocultured in 96‐well plates and incubated for 4 hour at 37°C. After centrifugation, fluorescence intensity (F) of cell‐free supernatants was measured (excitation 485 nm, emission 538 nm). Cytolytic activity was calculated using the following formula:
%of specific lysis=(F experiment-F spontaneous)/(F maximal-F spontaneous)×100.
Assays were carried out in triplicate at least.
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2

Fluorescent Staining of Cell Cultures

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Primary cSCs 4 or 7 days after isolation were treated with 50 nM calcein-AM (Dojindo) in DMEM (high glucose, sodium pyruvate, and GlutaMAX supplement) supplemented with 20% FBS, 1% CEE, and 1% PS at 37 °C with 5% CO2 for 30 min. C2C12 myoblasts were treated with 50 nM calcein-AM in DMEM (high glucose) supplemented with 10% FBS and 1% PS at 37 °C with 5% CO2 for 30 min. C2C12 myotubes 4 days after induction of differentiation were treated with 1 μM BCECF-AM (DOJINDO), 1 μM CFSE (DOJINDO), 1 μM FDA (DOJINDO) or 1 μM calcein-AM in DMEM (high glucose) supplemented with 2% horse serum and 1% PS at 37 °C with 5% CO2 for 30 minutes.
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3

Cytotoxicity Assay for CAR T-cells

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Cell lytic activity was examined using calcein acetoxymethyl ester (Calcein-AM) (Dojindo, Kumamoto, Japan) cytotoxicity assays.33 (link) Calcein-AM-labeled Raji cells and K562 target cells (104 each) were co-cultured with increasing numbers of effector CD19-CAR T-cells. After 4-h incubation, supernatants were harvested and transferred into 96-well plates. Sample fluorescence was read by Fluoroskan Ascent FL (Thermo Fisher Scientific, Waltham, MA, USA). The percentage of lysed cells was calculated with the same formula used for 51Cr release assays.34 (link)
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4

Multimodal Cell Viability Assay

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Propidium iodide (PI, Dojindo, Japan), calcein-acetoxymethyl (calcein-AM, Dojindo) and Hoechst 33342 (Dojindo) were incubated with the cells at 37 °C and 5% CO2 for 15 min at a final concentration of 1, 1.5, and 3.6 μM, respectively, and then were washed once for Inverted Fluorescence Microscope analysis or photographed by a high-throughput cell imaging system at the following fluorescent wavelengths: PI, λex = 530 nm and λem = 580 nm; calcein-AM, λex = 490 nm and λem = 515 nm; and Hoechst33342, λex = 350 nm and λem = 460 nm. Trypan Blue (Sigma, USA) staining was performed at a final concentration of 0.01% in cell medium and then observed under optical light using an inverted microscope.
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5

Quantifying Viability of PC12 Cells

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PC12 cells were seeded on the 24-well plate at 1 × 104 cells. One to two days after seeding, the cells were treated with Pd(bpy) or Pd(sulfo-bpy) for 3-4 days. To visualize the live cells, the cells were loaded with 2 µM calcein-AM (dojindo) for 15 min in HBS, and then washed with HBS. The fluorescent images of the cells were obtained with fluorescent microscopy (Axio Observer7, Carl Zeiss) equipped with CMOS camera (Axiocam712mono, Carl Zeiss), and the cell numbers were automatically counted with ZEN blue software (Carl Zeiss).
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6

Fluorescent Labeling and Inhibition Assay

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AF488 N-hydroxysuccinimide (NHS) ester and AF647 NHS ester were purchased from Thermo Fisher Scientific (Waltham, MA, USA). Rhodamine 6G (Rh6G) was obtained from Sigma-Aldrich (St. Louis, MO, USA). Calcein AM was obtained from Dojindo (Osaka, Japan). SiR-Actin and the calcium channel inhibitor verapamil were obtained from Cytoskeleton (Denver, CO). The TGF-β receptor I inhibitor LY364947, PI, DX, and phenylmethylsulfonyl fluoride (PMSF) were obtained from Fujifilm (Tokyo, Japan). Rabbit polyclonal anti-fibronectin 1 antibody was purchased from Abcam (ab2413) (Cambridge, UK). pAcGFP1-Mem was purchased from Clontech (Takara Bio, Shiga, Japan). Smear Gell (product number: SG-01) for spheroid immunofluorescence was obtained from GenoStaff (Tokyo, Japan). The SlowFade mountant as a microscope was obtained from Thermo Fisher Scientific. The protease inhibitor cocktail (P8340) was purchased from Sigma-Aldrich.
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7

Cell Wound Closure Assay Protocol

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Cell wound scratch assay was performed as manufacturer’s instruction. Firstly, marker pen was used to draw a line at an interval of 1 cm behind the 6-well plate. Then, about 5 × 105 cells were plated into 6-well plate. Then, a scratch wound was generated using a pipette tip and washed three times with PBS to remove the scratched cells. Subsequently, serum-free medium was added and cells were further cultured in a humidified incubator at 37 °C. Cells were stained with Calcein-AM (Dojindo, China) and imaged at 0, 6, 12, 24, and 48 h. Numbers of fluorescent cell corresponding to wound closure rate were calculated by Image-J software (NIH, Bethesda, MD, USA).
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8

Cell Proliferation and Viability Assay

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Proliferation data were determined using Cell Count Reagent SF (Nacalai Tesque). The data were analyzed using SoftMax® Pro Microplate Data Acquisition and Analysis software (Version 7.0, Molecular Devices, Sunnyvale, CA, USA).
For live and dead staining, HGnFs were stained with calcein-acetoxymethylester (calcein-AM) and propidium iodide (PI) solutions, respectively (Dojindo, Kumamoto, Japan). The stained cells were photographed using a BZ-II all-in-one fluorescence microscope (Keyence Corporation, Osaka, Japan).
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9

Time-lapse Microscopy of NHEK Cultures

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NHEKs were seeded confluently in two-well culture inserts (ibidi) on glass-bottom dishes (Matsunami). Culture inserts were removed after overnight incubation, followed by washing with PBS. Cells were then cultured in Humedia-KG2, MCDB153 medium, or low chloride MCDB153 medium. After 12 or 24 h of cultivation, calcein-AM (Dojindo) was added to the culture medium to visualize the cells. ImageJ software was used for data analysis. For time-lapse analysis, cells were cultured in a Stage Top Incubator (TOKAI HIT) on a confocal laser scanning microscope (IX83 Olympus) and images were captured every 10 min.
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10

Quantifying Viability of DPSCs with SCF

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DPSCs were inoculated on the cell
slides (1 × 105 cells/well). SCF was added to the
culture medium in the SCF + DPSCs group. After being washed with PBS,
DPSCs were separately dyed for 30 min with calcein AM (Dojindo). Furthermore,
the images were photographed using the same microscope equipment described
above and were analyzed using the Image J software to count the number
of living cells.
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