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Lc3b antibody

Manufactured by Merck Group
Sourced in United States

The LC3B antibody is a protein-specific antibody that recognizes the light chain 3B (LC3B) protein. LC3B is a widely used marker for the process of autophagy, a cellular mechanism involved in the degradation and recycling of cellular components. The LC3B antibody can be used in various research applications, such as Western blotting, immunohistochemistry, and immunocytochemistry, to detect and analyze the expression and localization of the LC3B protein.

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9 protocols using lc3b antibody

1

Immunopurification of Autophagic Vesicles

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Biochemically-purified autophagic vesicles (AV fraction) were further immunopurified using the DynabeadsTM Protein G immunoprecipitation kit (Life Technologies Europe BV, #10007D). Two hundred fifty micrograms of the AV fraction was immunopurified using the LC3b antibody (Sigma, L7543) or the IgG antibody (Milipore, #12-370) as control. Dynabeads were pre-incubated with the aforementioned antibodies for 30 min at room temperature with rotation. The purified AV fraction was added to the Ab-beads and was further incubated for 1 h incubation at room temperature with rotation. Elution of the immuno-precipitated structures was performed based on the manufacturer’s instructions. Immunopurified material was then used for western blot.
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2

Regulation of Intestinal Barrier Integrity

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Caco-2 cells and IEC-6 cells were obtained from the Cell Bank of the Chinese Academy of Sciences (analog no. TCHu146, Shanghai, China) and Shanghai Fuxiang Biotechnology (catalog no. CRL-1592, Shanghai, China) respectively. Cells were cultured in DMEM supplemented with 10% fetal bovine serum and 1% penicillin/streptomycin. Cells were maintained in a 5% CO2/95% air atmosphere at 37 °C. Recombinant TNF-α was obtained from R&D Systems (catalog no. 510-RT-010, Minneapolis, MN, USA). Bafilomycin A1 (catalog no. 189490) and 3-methyladenine (catalog no. 19-148) were purchased from EMD Millipore (Temecula, CA, USA). PP242 was purchased from Santa Cruz Biotechnology (catalog no. sc-301606, Santa Cruz, CA, USA). Claudin-2 antibody (catalog no. 51-6100, Invitrogen, Carlsbad, CA, USA), LC3B antibody (catalog no. L7543, Sigma, St. Louis, MO, USA), P62 antibody (catalog no. sc-25575, Sancta Cruz Biotechnology, Santa Cruz, CA, USA), and β-actin antibody (catalog no. 4970, Cell Signaling Technology, Danvers, MA, USA) were purchased from relevant manufacturers. Ad-mCherry-GFP-LC3B was purchased from Beyotime Biotechnology (catalog no. C3011, Shanghai, China).
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3

Molecular Mechanisms of Doxorubicin-Induced Cell Death

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Doxorubicin was purchased from Cell Signaling Technology (Danvers, MA, USA). LC3B antibody was purchased from Sigma-Aldrich (St. Louis, MO, USA); caspase-3 antibodies were purchased from Santa Cruz (Dallas, TX, USA) and Cell Signaling Technology (Danvers, MA, USA); p62 antibody and horseradish peroxidase- (HRP-) conjugated secondary antibody were purchased from Cell Signaling Technology (Danvers, MA, USA); CyclinG1 antibody was purchased from Proteintech Group (Chicago, IL, USA). Unless otherwise specified, all other chemicals were purchased from Sigma (St. Louis, MO, USA) or Solarbio (Beijing, China).
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4

Reagents for Protein Detection

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L-Arginine monohydrochloride was purchased from Nacalai Tesque (Kyoto, Japan). LC3B
antibody and SEA0400 were purchased from Sigma-Aldrich (St. Louis, MO, USA).
Myeloperoxidase (MPO) antibody was purchased from Abcam (Cambridge, UK). p62 antibody was
purchased from Cell Signaling Technology (Danvers, MA, USA).
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5

Immunoblotting Analysis of Autophagy and Apoptosis Markers

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Antibodies against p62, Beclin1, ERK1/2, phosphorylated-ERK1/2, AMPK, phosphorylated-AMPK, mTOR, phosphorylated-mTOR, Bcl-2 and caspase-3 were purchased from Cell Signaling Technology (Danvers, MA, USA); GAPDH antibody was purchased from Santa Cruz Biotechnology (Santa Cruz, CA, USA); LC3B antibody was purchased from Sigma (St. Louis, MO, USA). Secondary antibodies directed against rabbit or goat were purchased from Cell Signaling Technology. Unless otherwise indicated, all chemicals were purchased from Sigma or Amresco.
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6

Immunohistochemistry for Dermal Markers

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Sections (5 mm) were stained with H&E to assess the general morphology. Paraffin sections were immunostained with lineage-specific antibodies to identify eosinophils and dermal fibroblasts by immunohistofluorescence. Samples were incubated with rat anti-mouse major basic protein (MBP) antibody (specific for eosinophils, a gift from James J. Lee, Ph.D., Mayo Clinic, Scottsdale, AZ, United States), rabbit anti-Vimentin antibody (specific for dermal fibroblasts, Cell Signaling Technology, Beverly, MA, United States), AMPK alpha-1 monoclonal antibody, mTOR monoclonal antibody, and IL-37 polyclonal antibody (Thermo Fisher Scientific, Rockford, IL, United States), and LC3B antibody (Sigma-Aldrich, St. Louis, MO, United States). Cy3-conjugated goat anti-rat immunoglobulin G (IgG) antibody (Beyotime Co., Shanghai, China) and Alexa Fluor 488-conjugated goat anti-rabbit and goat anti-mouse IgG antibody (ABclonal, MA, United States) were used as secondary antibodies. All images were acquired with a Leica DM6000B microscope (Leica Microsystems GmbH, Wetzlar, Germany) and processed using the Leica Application Suite software (Leica Microsystems GmbH).
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7

Antibody and Reagent Selection Guide

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The following antibodies and reagents were used: VCP antibody was purchased from Cell signaling Technology (Danvers, MA, USA) or Abcam (Cambridge, United Kingdom). β-actin, calpain2, GSK-3β (S9), mTOR (S2448) and cleaved caspase-3 antibodies were purchased from Cell Signaling Technology; LC3B antibody from Sigma-Aldrich (St. Louis, MO, USA); MAP2 antibody from Abcam; GFAP and Vimentin antibodies from Millipore (Billerica, MA, USA). DBeQ, staurosporine, lactacystin and BafA1 were purchased from Sigma-Aldrich, Z-VAD-FMK from R&D Systems (Minneapolis, MN, USA), necrostatin-1 from Enzo Life Sciences (Farmingdale, NY, USA). They were diluted in dimethyl sulfoxide at appropriate concentrations.
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8

Western Blot Analysis of Autophagy Markers

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BCA was purchased from Wako Pure Chemicals, Industries, Ltd. (Chuo-ku, Osaka, Japan). The following antibodies used for western blotting were purchased from Cell Signaling Technology (Massachusetts, USA): Beclin-1 antibody (3495S), p62/SQSTM1 antibody (5114S), p-ULK1ser317 antibody (6887S), p-ULK1ser757 antibody (6888S), p-p70S6K antibody (9234P), p-4E-BP1 antibody (9451P), p-mTOR antibody (5536P), p-AMPKβ antibody (4181P), β-actin antibody (4970S) and anti-rabbit horseradish peroxidase-labeled antibody (7054S). The LC3B antibody was purchased from Sigma Chemical Company (042M4774V). All other reagents were purchased from Sigma Chemical Co. (St. Louis, MO, U.S.A.) unless otherwise stated. Salmonella ATCC14028 was stored at −80°C.
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9

Quantitative Western Blot Analysis of Autophagy and Signaling Proteins

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Western Blotting was performed using standard methods. After treatment with the indicated drugs, cells were washed with cold PBS and lysed in RIPA buffer (Thermo Fisher Scientific, 87787) supplemented with protease inhibitors cocktail and phosphatase inhibitor cocktail (Thermo Fisher Scientific, 78420). Lysates were centrifuged at 12,000 ×g for 15 min at 4 °C, and protein concentrations were determined by BCA assay (Beyotime, P0010). Proteins (30 μg) were electrophoresed on 10–12% SDS-PAGE and transferred onto a polyvinylidene difluoride membranes (Merck Millipore, ISEQ00010). After blocking with 5% skim milk in Tris-buffered saline for 2 h, the membrane was incubated with the primary antibodies for overnight at 4 °C. The following primary antibodies were used: LC3B antibody (1:1000; Sigma-Aldrich, L7543), BECN1 antibody (1:1000; MBL, PD017), ATG5 antibody (1:1000; Sigma-Aldrich, A0856), SQSTM1 antibody (1:1000; MBL, PM045), Smad2 antibody (1:800; CST, 5339S), phospho-Smad2 antibody (1:800; CST, 3108S), Smad3 antibody (1:1000; Abcam, ab28379), phospho-Smad3 antibody (1:800; Abcam, ab52903), c-Jun antibody (1:800; CST, 9165S), phospho-c-Jun antibody (1:800; CST, 3270S), GAPDH antibody (1:1000; CST, 97166S). Secondary antibodies were labeled with HRP and the signals were detected using ECL Kit (Biorad, 170-5061).
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