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25 protocols using ad cre

1

Adenoviral Modulation of Chondrocyte Differentiation

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On day 3 of culture, micromasses were transduced with adenoviruses expressing Cre recombinase (Ad-Cre, Vector Biolabs) or green fluorescent protein (Ad-GFP, Vector Biolabs) at 1000 MOI. For experiments without inhibitors, cells were collected 48 hr following transduction for RNA and protein extraction and matrix staining with Alcian blue. The MEK (Mapk/Erk Kinase) inhibitor, U0126 (1 μM, Millipore 662005), or vehicle (0.01% v/v DMSO) was added to IMC micromass cultures 48 hr after adenoviral transduction. RNA and protein extracts and plates for Alcian blue staining were collected 24 hr later. For Dusp6 overexpression experiments, micromasses were transduced simultaneously with Ad-Cre or Ad-GFP (1000 MOI) and either Ad-GFP or Ad-Dusp6 (Vector Biolabs) (1000 MOI). RNA, protein extracts, and plates for Alcian blue staining were collected 48 hr later.
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2

Isolation and Adenoviral Transduction of Hepatic Stellate Cells

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HSCs isolated from SMO-flox male mice were cultured for 3 days, and then starved in serum-depleted medium for overnight. Adenoviruses harboring either the GFP gene (AdGFP, Vector Biolabs, Malvern, PA, USA) or Cre recombinase gene (AdCre, Vector Biolabs) were added to these pHSCs at a multiplicity of infection (MOI) of 80, as described previously16 (link). After 24 hours, virus-containing medium was aspirated and replaced with fresh medium. Viral efficiency of AdGFP infection was assessed by fluorescent microscope, with >95% of infected cells found to be GFP positive.
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3

VEGF Regulation of Mandibular Ossification

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Mandibles of E15.5 wild-type (WT) embryos were dissected in Hanks Balanced Salt Solution (HBSS, Sigma-Aldrich) and cultured in osteogenic medium containing β-glycerophosphate (8 mM; Sigma-Aldrich) and l-ascorbic acid phosphate (50 μg/ml; Wako), or in osteogenic medium supplemented with 10 ng/ml of VEGF164. Medium was replaced twice during the culture period. The mandibles were harvested on day 7 and subjected to Alizarin Red and Alcian Blue staining. Mandibular ossification was analyzed and quantified as described above. The entire experiment was repeated once and consisted of a total of 10 control and 10 VEGF164 treated mandibles.
Mandibles of E15.5 Vegfafl/fl embryos were dissected in HBSS and infected with either Ad-Cre or Ad-GFP (Vector Biolabs) for 24 h followed by culture in osteogenic medium. Protein was harvested from mandibles after 4 day culture for VEGF ELISA and Western Blotting analysis. Additional mandibles were infected with Ad-Cre and cultured in osteogenic medium (n = 3) or in osteogenic medium supplemented with 10 ng/ml of VEGF164 (n = 3). After 7 days of culture, the mandibles were subjected to Alizarin Red and Alcian Blue staining, and mandibular ossification was analyzed.
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4

Adenoviral Cre-mediated Nampt Knockout

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Bone marrow stromal cells from Namptf/f mice or wild-type littermates were incubated with α-MEM complete media containing recombinant adenoviruses encoding Cre recombinase (Ad-Cre;Vector Biolabs) at a multiplicity of infection of 100 for 24 h. Cells were then washed twice with α-MEM and re-plated for NAD+, mRNA, western blot, and mineralization assays.
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5

Adenoviral Cre Recombinase Delivery

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Adenovirus carrying Cre recombinase (Ad-Cre) was purchased from Vector Biolabs (USA). Each mouse was treated with 2.5 × 107Ad-cre viral genome copies diluted in warm 50 µl sterile MEM. After treatment, mice were placed on a warm pad until they woke up .
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6

Osteoblast Culture and Vhl Knockout

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The preparation of CM was generated as previously described (11 (link)). The calvariae of newborn Vhlflox/flox transgenic mice was used for primary osteoblasts isolation by serial round of digestion with 1.8 mg/ml type I collagenase (Sigma). To disrupt Vhl in vitro, the osteoblasts after three passages were infected with control adenovirus (Ad-GFP) or adenovirus expressing Cre recombinase (Ad-CRE, Vector Biolabs) at an MOI of 100. After incubation for 48 h, real-time RT-hypoxia response element (PCR) and western blot were conducted to detect the knock down efficiency of Vhl in osteoblasts.
Before the collection of culture medium of osteoblasts infected with Ad-GFP (CM-GFP) or culture medium of osteoblasts infected with Ad-CRE (CM-CRE), the cells were changed to incubate with α-MEM without serum or penicillin/streptomycin. In this study, the CM-GFP and CM-CRE were harvested after 24, 72, and 120 h and centrifuged at 3,000 rpm for 15 min, respectively, and then stored at −80°C. Additionally, 50% CM-GFP or CM-CRE was used in the following experiment and was not given special labeling in the figures.
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7

Isolation and Genetic Manipulation of Primary Osteoblasts

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Primary osteoblastic cells (POBs) were isolated from calvaria bones from Foxo1f/f mouse (postnatal day 3–5) by serial digestion as described previously [8 (link), 9 (link)]. Cells at passage 2 were used for adenovirus transduction using Ad-Cre (#1405, Vector Biolabs) to delete Foxo1 or Ad-Null (#1300, Vector Biolabs) as control as described previously [9 (link), 36 ]. Cells infected with Ad-Cre were labeled as Foxo1d/d and cells infected with Ad-Null were named as Foxo1f/f (control).
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8

Osteoclastogenesis from SIRT1-deficient Macrophages

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Macrophages were developed from bone marrow cells flushed from the femurs of three wild-type or SIRT1f/f mice (Jackson Laboratories) cultured in α-MEM supplemented with 10% FBS and 1% PSG (Invitrogen) in the presence of 30 ng/ml M-CSF (R&D Systems, Minneapolis, MN). Four days later cells were infected with adenovirus encoding Cre recombinase (Ad-Cre) (Vector Biolabs, Philadelphia, PA) at a MOI of 30 for 6 hours. Seventy-two hours later cells were trypsinized and re-plated in 48-well plates and cultured for 4 days with 30 ng/ml M-CSF and 30 ng/ml RANKL (R&D Systems) to obtain osteoclasts, in the presence of vehicle or SRT2104. At the end of the experiment, osteoclasts were fixed with 10% neutral buffered formalin for 15 minutes and stained for tartrate-resistant acid phosphatase (TRAP). Multinuclear TRAP+ cells were quantified.
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9

Adenoviral Transduction and Quantification

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Adenoviruses for red fluorescent protein (Ad-RFP) and Cre recombinase (Ad-Cre) (Vector Biolabs, Malvern, PA, USA) were applied at a multiplicity of infection (MOI) 0, 10, 100 and, 200. After three days, TPCs were fixed in 4% paraformaldehyde and stained with DAPI. RFP+ or RosaT+ cells and DAPI+ nuclei were quantified in 3 representative images per well, and the number of RFP+/DAPI+ and RosaT+/DAPI+ cells was determined.
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10

Adenovirus-Mediated Transduction of Mouse Islet Cells

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The following adenoviruses were purchased: Ad-GFP-m-SIK1 (ADV-271991, Vector Biolabs) and Ad-CMV-GFP (1060, Vector Biolabs) as a control. Dissociated mouse islets were transduced with adenoviruses for 2 h in RPMI 1640 medium (21875034, Thermo Fisher Scientific) without FBS at an MOI of 50. The wells were then washed, and RPMI 1640 (21875034, Thermo Fisher Scientific) containing 10% FBS and 15 mM glucose was added to the wells. After 4 h, cells were treated with HG (0.1, 0.05 or 0.025 μM) or with DMSO (1%) in the presence of EdU (10 μM). After 4 d, cells were either fixed for immunofluorescence studies or lysed to assess mRNA expression. Sik1 and Hprt (control) primer sequences are shown in Supplementary Table 8. For experiments with MIN6, cells were transduced with adenoviruses for 4 h in DMEM-based medium (C0003–04, AddexBio) without FBS at an MOI of 50. The wells were then washed, and DMEM-based medium (C0003–04, Addexbio) containing 15% FBS and 0.055 mM β-mercaptoethanol was added to the wells. After 4 d, cells were treated with HG (1 μM) or DMSO (1%) for 6 h. For the experiments presented in Fig. 7, islet cells from Atf6 floxed mice were transduced with Ad-LacZ (1080, Vector Biolabs) or Ad-Cre (1045, Vector Biolabs) at an MOI of 10 for 72 h in RPMI 1640 medium containing 10% FBS and 15 mM glucose.
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