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7 protocols using ab134014

1

Immunohistochemical Visualization of Neuronal and Glial Markers

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Immunohistochemistry for the visualization of neuronal nuclear antigen (NeuN), rat endothelial cells antigen 1 (RECA-1), and Iba-1 positive cells expression was performed. To begin the procedure, six sections on average were selected in each brain region, after being blocked with 10% normal goat and rabbit serum for 1 h. In brief, the sections were incubated overnight at 4 °C with a NeuN antibody (1:1000, ab134014, Abcam, Cambridge, UK), RECA-1 antibody (1:1000, ab9774, Abcam, Cambridge, UK), Iba-1 antibody (1:500; ab5079, Abcam, Abcam, Cambridge, UK), and 4HNE (1:200; HNE11-S, Alpha Diagnostic International, San Antonio, TX, USA). The sections were then incubated with the biotinylated rat and mouse secondary antibody (1:200; Vector Laboratories, Burlingame, CA, USA) with 0.3% Triton X-100 in PBS for 2 h at RT and subsequently incubated with antibody–biotin–avidin–peroxidase complex solution (Vector Elite ABC kit®; Vector Laboratories, Burlingame, CA, USA) for 1 h at RT. Finally, the sections were stained with a 3.3′-diaminobenzidine tetrahydrochloride (DAB kit; Vector Laboratories, Burlingame, CA, USA). The sections were finally mounted onto gelatin-coated slides. The slides were air-dried overnight at room temperature, and the coverslips were mounted using Permount® (Vector Laboratories, Burlingame, CA, USA).
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2

Stereotactic Injection of Tau Fractions

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Stereotactic injections of brain extract were performed as described previously with minor modifications37 (link). WT mice (male, 3-months-old, male, C57BL6/J) were injected by using a 30-gauge Hamilton microsyringe in the left frontal cortex (bregma +1.3 mm, 1.5 mm lateral to midline, −1.6 mm relative to bregma) at an infusion rate of 0.2 μl min−1. HMW (2.5 μl) (Frc. 2–3) or LMW (Frc. 13–14) SEC fractions (100 or 500 ng ml−1 human tau) from rTg4510 brain extract (male, 12-months-old, PBS-soluble, 3,000g) were injected. The same volume of PBS was injected as a negative control. Mice were killed 48 h after injection and brain sections from frontal cortex were immunostained with human tau-specific antibody (Tau13, #MMS-520R, Covance, 1:2,000), chicken polyclonal anti-NeuN antibody (#ab134014, Abcam, 1:500), and counterstained with DAPI. Anti-mouse Alexa488 (1:1,000) and CY3-labelled anti-chicken IgG (1:1,000) secondary antibodies were used to detect human tau and NeuN, respectively (see also Immunostaining of brain sections). Images were acquired on an AxioImager Z1 epifluorescence microscope (Carl Zeiss, Oberkochen, Germany). Images were semi-quantitatively evaluated for human tau staining by a rater who was blinded to the experimental conditions, using a score from 0 (no human tau labelling on NeuN positive neurons) to 4 (maximum human tau labelling on NeuN positive neurons).
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3

Antibody Validation for Neuronal and Glial Markers

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Goat anti-IGF-1 antibody (ab106836), rabbit anti-ps198 antibody (ab79540), chicken anti-NeuN antibody (ab134014), and rabbit anti-GFAP (ab33922) were purchased from Abcam (Cambridge, MA, United States). Rabbit Polyclonal GSK3 Beta Antibody (22104-1-AP) was purchased from Proteintech (Cambridge, CA, United Kingdom). Rabbit Anti-phospho-GSK3 Beta (Tyr216) antibody (bs-4079R) was provided by Bioss (Danvers, MA, United States). Donkey anti goat HRP and goat anti rabbit HRP antibody (PAB0012 and PAB0011) were purchased from Bioswamp (Waltham, MA, United States). For secondary antibodies used in immunofluorescence, we used the Alexa Fluor 488 and 594 from Abcam (Cambridge, MA, United States).
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4

Antibody Characterization for Cell Biology

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Anti-Collagen IV antibody (AB756P) was from EMD Millipore (Billerica, MA) and antibodies against GFAP (ab4674), NeuN (ab134014), and Rok-α (71598) were from Abcam (Cambridge, MA). Anti-VE cadherin (H-72, sc28644), Rok-α (D2, sc365275), and ephrinB2 (C18, sc910) antibodies were from Santa Cruz (Dallas, TX) and antibodies against Rok-α (PLA0013) and Von Willebrand Factor (VWF, AB7356) from Sigma. Anti-GAPDH (2118S) and anti-myc (9B11, 2276) antibodies were from Cell Signaling Technologies (Beverly, MA). Recombinant mouse EphB4-Fc and human Fc IgG and antibody against endoglin (CD-105; AF1320-SP) were from R & D Systems (Minneapolis, MN). Anti-Fc (rabbit anti-human IgG, Fcγ fragment specific, 309-005-008) was from Jackson immune research. 1,1′-Dioctadecyl-3,3,3′,3′-tetramethylindocarbocyanine-acetylated low density lipoprotein from human plasma (Dil-Ac-LDL) was purchased from Alfa Aesar Co. γ-Secretase inhibitors IX (DAPT) and X (L685,458) were from Calbiochem (Billerica, MA) and RO4929097 was from Selleck Chemicals.
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5

Immunofluorescence Analysis of Retinal Tissue and Cells

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For immunofluorescence staining, mice were sacrificed, perfused with 4% paraformaldehyde (PFA), and eyeballs fixed overnight in 4% PFA at 4°C. After fixation, they were dehydrated by 25% sucrose, frozen at −80°C, embedded in optimal cutting temperature compound, and sectioned into 5 µm sections with a cryostat. As for cells, they were grown on glass coverslips in 24-well plates, washed 3 times in PBS, and fixed with 4% PFA for 30 min at room temperature. Retinal tissue sections or cells were then blocked in 0.5% goat serum for 1 h and incubated with the following primary antibodies overnight at 4°C: LC3B (1:100; ab18709, Abcam, USA), p62 (1:100; 39749S, Cell Signaling Technology, USA), ionized calcium-binding adaptor molecule-1 (Iba-1, 1:100; ab283319, Abcam, UK), CD16/32 (1:100; ab223200, Abcam, UK), Arg-1 (1:100; sc-271430, Santa Cruz, USA), and NeuN (1:100; ab134014, Abcam, UK). Afterwards, tissue sections or cells were incubated with Alexa Fluor 488- or 594-conjugated secondary antibodies for 1 h at room temperature. Nuclei were stained with 4′,6-diamidino-2-phenylindole (DAPI) for 5 min. Images were obtained with either a fluorescence microscope, or a CLSM, and quantified with ImageJ software.
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6

Stereotactic Injection of Tau Fractions

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Stereotactic injections of brain extract were performed as described previously with minor modifications38 (link). WT mice (male, 3 months old, male, C57BL6/J) were injected by using a 30-gauge Hamilton microsyringe in the left frontal cortex (bregma +1.3 mm, 1.5 mm lateral to midline, −1.6 mm relative to bregma) at an infusion rate of 0.2 μL/min. 2.5 μL of HMW (Frc.2–3) or LMW (Frc.13–14) SEC fractions (100 or 500 ng/ml human tau) from rTg4510 brain extract (male, 12 months old, PBS-soluble, 3,000g) were injected. The same volume of PBS was injected as a negative control. Mice were killed 48 hours after injection and brain sections from frontal cortex were immunostained with human tau specific antibody (Tau13, #MMS-520R, Covance, 1:2000), chicken polyclonal anti-NeuN antibody (#ab134014, Abcam, 1:500), and counterstained with DAPI. Anti-mouse Alexa488 (1:1000) and CY3-labeled anti-chicken IgG (1:1000) secondary antibodies were used to detect human tau and NeuN, respectively (see also Immunostaining of brain sections). Images were acquired on an AxioImager Z1 epifluorescence microscope (Carl Zeiss, Oberkochen, Germany). Images were semi-quantitatively evaluated for human tau staining by a rater who was blinded to the experimental conditions, using a score from 0 (no human tau labeling on NeuN positive neurons) to 4 (maximum human tau labeling on NeuN positive neurons).
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7

Immunohistochemical Characterization of Neuronal and Glial Markers

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Primary antibodies used were rabbit anti-HSV-1 (B0114, Dako), chicken anti-NeuN (ab134014, Abcam), mouse anti-NeuN (clone A60, Millipore), and rabbit anti-beta III Tubulin (ab18207, Abcam), rabbit anti-Iba1 (Wako), rabbit anti-STAT1α91 (M-23, Santa Cruz Biotechnology). The mouse anti-A5 antibody (FE-A5), developed by Bruce A. Fenderson at Thomas Jefferson University, was obtained from the Developmental Studies Hybridoma Bank, created by the NICHD of the NIH and maintained at The University of Iowa, Department of Biology, Iowa City, IA. Secondary antibodies used were goat-anti-mouse/rabbit Alexa 555, goat-anti-mouse/rabbit Alexa 488 (Invitrogen), and donkey-anti-chicken Alexa488 (Jackson ImmunoResearch Laboratories). Isolectin B4 conjugated to FITC (Sigma) was added to cultures at a concentration of 10μg/mL to stain KH10 neurons in chambers [67 ]. Counterstaining was done by incubation with DAPI (Invitrogen). Samples were mounted using FluorSave Reagent (Calbiochem). When indicated, cells were treated with 12.5U/mL (unless noted) IFNβ (PBL Interferon Source), 100ng/mL IFNγ (Miltenyi Biotec) or 100ng/mL IFNλ2 (PeproTech) for 18 hours prior to infection or for the specified amount of time prior to staining.
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