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51 protocols using kt5720

1

Nebulized Imatinib and Cellular Signaling

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Imatinib was provided by Novartis (Basel, Switzerland); nebulized Imatinib was solved in aqua at a concentration of 10 mM. SQ22536, KT5720, KT5823, glibenclamide, iberiotoxin, 4-aminopyridine and DMPQ were purchased from Tocris Bioscience (Ellisville, Missouri, USA). ET-1 was acquired from BIOTRENDS (Wangen, Switzerland) and SU6668 and ponatinib were acquired from Biomol (Hamburg, Germany). L-Name or standard laboratory chemicals were obtained from Sigma-Aldrich (Steinheim, Germany). The ELISA-kits were acquired from Enzo (Lörrach, Germany). Human PDGF-BB was delivered by Peprotech (Hamburg, Germany).
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2

Isolation and treatment of primary microglia

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Primary microglia cultures were prepared from P0 mouse pups following a published protocol (Lian et al, 2016). Briefly, the cortices of the brains were harvested and digested by trypsin. The cells were plated in poly‐d‐lysine (PDL)‐coated T‐75 flasks as mixed glial cultures and let grow till confluent astrocyte layers form. The microglia were isolated by tapping the flasks vigorously. Purified microglia were seeded into PDL‐coated 96‐well plates at 20,000 cells/well density and let recover overnight. The cells were treated with 10 pg of SEC‐purified oAβ, 100 μM isoproterenol, 50 μM cAMP‐Rp (Tocris 1337), 100 nM KT5720 (Tocris 1288), and 100 nM PKA inhibitor fragment (6‐22) amide (Tocris 1904). Cells were harvested after 4 h of incubation at 37°C and lysed for RNA analysis.
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3

Pharmacological Manipulation of CRF2 Signaling

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Sprague-Dawley rats were purchased from Harlan Laboratories. CRF2 homozygous KO mice (Stock number: 010842; Strain name: B6; 129-crhr2tm1jsp/J) and WT mice (from the same colony) were bought from Jackson Laboratories. This study was carried out in strict accordance with the recommendations in the Guide for the Care and Use of Laboratory Animals of the National Institutes of Health. The protocol was approved by the Committee on the Ethics of Animal Experiments of the University of North Dakota (0702-2). All efforts were made to minimize suffering. CRF was purchased from American Peptide Company (Sunnyvale, CA). The following reagents were products of TOCRIS (Ellisville, MO): K41498, astressin 2B, NBI 27914, CP 154526, MDL 12330A, SQ 22536, forskolin, 3,7-dihydro-1-methyl-3-(2-methylpropyl)-1H-purine-2,6-dione (IBMX), KT 5720, Rp-cAMPS. The other chemicals were purchased from Sigma-Aldrich (St. Louis, MO).
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4

Peptide Synthesis and Characterization

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l-Glutamine, fetal bovine serum, penicillin, streptomycin, amphotericin B, Hanks’ salts, trypsin, DMEM, and (4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were from PanEco, Moscow, Russia. 2′,7′-Dichlorodihydrofluorescein diacetate (DCFH-DA), HEPES, DMSO, d-glucose, MPP+, KCN, MPP+, l-NAME, tert-butyl hydroperoxide, and bovine serum albumin were from Sigma-Aldrich, St. Louis, MO, USA. 666-11, SB 202190, SP 600125, salirasib, FIPI, KN-93, ML-193, PSB C5, HA-1004, U-0126, KT-5720, and U-73 were from Tocris Bioscience, Bristol, UK. Total RNA Purification kit was from Jena Biosciences, Jena, Germany. MMLV reverse transcription kit and qPCR master mix qPCRmix-HS SYBR were from Evrogen, Moscow, Russia. cAMP determination kit and BrdU cell proliferation assay kit were from Abcam, Cambridge, MA, USA. DNase I was from Thermo Fisher Scientific, Waltham, MA, USA.
The peptide was synthesized by methods of classical peptide chemistry in solution using both protected and free L-amino acids, as described earlier [49 (link)]. Purity of the final compound was not less 98% (HPLC analysis, Supplementary S2).
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5

CGRP and Inhibitor Preparation Protocol

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Stock solutions of CGRP or CGRP8-37 (American Peptide Company, Sunnyvale, CA) were prepared at a concentration of 1 mM in 0.9% saline solution (Fisher-Scientific, Fair Lawn, NJ). The PKA inhibitor KT 5720 (Tocris, Bristol, UK) was prepared at a stock concentration of 1 mM in DMSO (Sigma-Aldrich, St. Louis, MO). On the day of the experiment, an aliquot of 1 mM CGRP was thawed and diluted in 0.9% sterile saline to a concentration of 1 μM either alone or in solution with one of the two inhibitors. The inhibitors CGRP8-37 and KT 5720 were prepared in 0.9% saline solution with CGRP at concentrations of 5 μM and 500 nM, respectively. The retrograde labeling dye Fast Blue (Polysciences Inc., Warrington, PA) was diluted to a concentration of 4% in sterile phosphate buffered saline (PBS) containing 1 μM CGRP.
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6

Monitoring EPAC1 Signaling Dynamics

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Wild type HEK293T-vector and HEK293T–EPAC1 cells were plated at 10,000 cells/well in 30 μl growth media on a corning Epic 384 well cell assay microplate (PerkinElmer), and then incubated overnight at 37 °C. Cells were then equilibrated for 2 h at room temperature and then a baseline measurement was recorded using an Enspire plate reader. The cells were then treated with varying concentrations of the EPAC1 antagonist, ESI-09 (Sigma Aldrich) or the PKA inhibitors, H-89 (Tocris) or KT5720 (Tocris), in the presence or absence of forskolin (Tocris) and rolipram (Tocris) or 007-(8-pCPT-O′-Me-cAMP) (Biolog). Dynamic mass redistribution measurements (DMR) were then taken every minute for 60 min. All treatments were made up in DMSO (Fisher Scientific) and diluted in 1 × HBSS (Life Technologies)/20 mM HEPES (Sigma Aldrich) assay buffer. For data analysis DMR readings from HEK293T-vector cells were subtracted from HEK293T–EPAC1 cells.
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7

Chemical Agents for Neuroscience Research

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ω-Agatoxin, AM-0902, AMG9810, AZ-628, 1,9-dideoxyforskolin, 6-Bnz-cAMP, 8-Br-cAMP, brain-derived neurotrophic factor (BDNF), CE3F4, 8-pCPT-2-O-Me-cAMP sodium salt (CPTOMe-cAMP), ω-conotoxin (CTX) MVIIC, [D-Ala2, NMe-Phe4, Gly-ol5]-enkephalin (DAMGO), ESI-05, ESI-09, diltiazem, forskolin, gabapentin, guanfacine, H89, HJC0350, ifenprodil, KT5720, L-732,138, MK-801, ML-786, NKH-477, (2R/S)-6-PNG, protein kinase inhibitor 14–22 (PKI 14–22), SNX-482, SQ22536, Torin-2, U0126 and U-73122 were from Tocris (Ellisville, MO). Baclofen and capsazepine were from Research Biochemicals International (RBI, now Sigma-Aldrich). Bovine serum albumin, cyanquixaline (6-cyano-7-nitroquinoxaline-2,3-dione) (CNQX), complete Freund’s adjuvant (CFA), ketamine, lidocaine, Phosphatase Inhibitor Cocktail 2 and common reagents were from Sigma-Aldrich. Matrigel was from BD Biosciences (San Jose, CA). Fura2-AM, nerve growth factor, neurobasal media, NuPAGE Tris-Acetate SDS gels, NuPAGE reagents and Pierce™ Protein-Free T20 (TBS) blocking buffer were from Life Technologies, Grand Island, NY. Halt™ Protease Inhibitor Cocktail and Pierce BCA Protein Assay Kit were from Thermo Fisher Scientific. Fetal bovine serum was from Irvine Scientific, Santa Ana, CA. Drugs were prepared as stock solutions of 1–10 mM in DMSO or water and then diluted in aCSF.
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8

Measuring Cellular Signaling Pathways

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Phentolamine mesylate was purchased from Santa Cruz (USA), forskolin from
Calbiochem (USA), KT5720 from Tocris (UK), and actinomycin D (Act D) from
Beyotime Institute of Biotechnology Co. (China). Other chemicals were purchased
from Sigma-Aldrich (USA).
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9

Synthesis of MNF Stereoisomers and Fenoterol

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(R,R’), (S,R ’), (R,S’) and (S,S’) stereoisomers of MNF as well as (R,R’)-Fenoterol (Fen) were synthesized according to previously reported synthesis scheme [1 (link), 18 (link)]. Forskolin, NKH-477, Ro 20–1724, (R)-(−)-rolipram, zardaverine, H-89 and KT 5720 were purchased from Tocris Bioscience (Ellisville, MO, USA). Epinephrine, isoproterenol, ICI-118,551 and CGP-20712A were obtained from Sigma-Aldrich (St. Louis, MO, USA). Tritiated compounds, [3H]CGP-12177 (41.6 Ci/mmol), [3H]thymidine (10 Ci/mmol) and [35S]-protein labeling mix (0.1 Ci/mmol) were from PerkinElmer Life and Analytical Sciences (Waltham, MA, USA).
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10

Characterization of ST2-Mediated Signaling

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All drugs were obtained from Sigma-Aldrich unless otherwise indicated. IL-33 was obtained from Novus Biologicals. The ST2 neutralizing antibody was obtained from R&D System. The soluble form of ST2 (sST2) was obtained from Cohesion Biosciences. KT-5720 was obtained from Tocris. GS9973 and R406 were obtained from Selleck. JX-401 was obtained from Abcam. Stock solutions of KT-5720, AG490, R406, GS9973, LY294002, Akt inhibitor III, SB203580, SB202474 and JX401 were prepared in dimethyl sulfoxide (DMSO). The final concentration of DMSO in the bath (maximum of 0.05%) had no functional effects on the currents measured.
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