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5 protocols using ab53226

1

Protein Expression Analysis in EMT

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Cells were washed in phosphate buffered saline (PBS) twice before proteins were extracted, and proteins were separated on a SDS/PAGE gel, transferred onto a PVDF membrane and subjected to immunoblot analysis. Blotting was performed with antibodies against E-cadherin (ab53226, Abcam, Cambridge, UK), vementin (ab8978, Abcam, Cambridge, UK), ZEB1 (ab180905, Abcam, Cambridge, UK), ZNF217 (ab136678, Abcam, Cambridge, UK). Goat anti-rabbit and goat anti-mouse immunoglobulin horseradish peroxidase-linked F(ab)2 fragments (ZAGB-bio, Beijing, China) were used as secondary antibodies.
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2

Immunofluorescence analysis of lung cells

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Primary AEC isolated from lung biopsy were fixed in 3% paraformaldehyde (PFA) for 10 minutes at room temperature, washed three times in 0.1% glycin/PBS, and incubated with either rabbit polyclonal antibody to E-cadherin (1:200) (#ab53226) (Abcam, USA), or rabbit polyclonal SP-C (1:50) (#sc13979) (Santa Cruz Biotechnology, USA) or mouse monoclonal antibody to surfactant protein A (SP-A) (1:200) (#ab51891) (Abcam, USA) over night in a moist chamber at 4 °C. For detection Cy3 labelled anti rabbit secondary antibody was used for E-cadherin and SP-C, while a alkaline phosphatase labeling was used to detect SP-A. A549 cells were treated with TN or TG, for 18 hours and 7 days respectively and grown in either BMSC-cm or normal media for 24 hours. Cells were then fixed in 3% PFA as described above and subsequently stained overnight at 4 °C in a moist box with anti-cytokeratin, pan-FITC anti-mouse (1:200) (#C5992), mouse anti-vimentin-Cy3 (1:1000) (both: Sigma, USA) (#C9080) or caspase-3 (1:200) (#9662 S) (Cell Signaling, USA). Samples were then washed 3 times with PBS and analyzed under a confocal microscope LSM 510 Carl Zeiss or under Leica DMI4000D microscope.
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3

Immunofluorescence Analysis of TGF-β2 Induced EMT

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The cells (1×105 cells/well) were seeded on an 8×8 mm cover slip in 24-well plates, starved overnight and then treated with 3 ng/ml TGF-β2. Following 48 h of treatment, the cells were fixed with 4% paraformaldehyde for 20 min and washed 3 times with PBS. The cells were permeabilized in PBS with 0.3% Triton X-100 for 5 min. The cells were then blocked with 5% normal goat serum for 1 h. Primary rabbit anti-human α-SMA antibody (1:500, ab5694) and rabbit anti-human E-cadherin antibody (1:1,000, ab53226) (both from Abcam, Cambridge, MA, USA) were incubated with the cells overnight at 4°C. After being rinsed extensively, the cells were exposed to the fluorescent secondary antibody (goat anti-rabbit Cy3, 1:10,000, CW0114S; goat anti-rabbit FITC, 1:10,000, CW0159S; both from CWBIO, Beijing, China) in the dark for 30 min. The coverslips were rinsed again with PBS 3 times and mounted with DAPI for 5 min, as a nuclear counterstain. Finally, the cells were observed under a fluorescence microscope (DP71; Olympus, Tokyo, Japan).
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4

Western Blot Analysis of EMT Markers

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Cells were washed in phosphate buffered saline (PBS) three times before proteins were extracted. Then cells were lysed using RIPA buffer, each protein sample (30 mg) was denatured in SDS sample buffer and separated via 10% SDS/PAGE gel. Separated proteins were transferred to polyvinylidene fluoride membranes (Millipore, Billerica, MA, USA) blocked with 5% non-fat milk and incubated overnight with primary antibodies. Blotting was performed with primary antibodies against E-cadherin (ab53226, Abcam, Cambridge, UK), N-candherin (ab18203, Abcam, Cambridge, UK), Vimentin (ab8978, Abcam, Cambridge, UK), ZEB1(ab180905, Abcam, Cambridge, UK), SIP1 ((ab113655, Abcam, Cambridge, UK)), ETS1 (ab10963, Abcam, Cambridge, UK), SNAIL (ab53519, Abcam, Cambridge, UK), TWIST1(ab49254, Abcam, Cambridge, UK), and FN (ab131056, Abcam, Cambridge, UK). Goat anti-rabbit and goat anti-mouse immunoglobulin horseradish peroxidase-linked F(ab)2 fragments (ZAGB-bio, Beijing, China) were used as secondary antibodies. GAPDH (ab181602, Abcam, Cambridge, UK) was used as a loading control.
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5

EMT Protein Expression Analysis

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Before the proteins were isolated via RIPA lysis buffer with protease inhibitors, cells (5 × 105) were rinsed in 6-well plates by the use of PBS for two times. Then, the isolated proteins were separated through SDS/PAGE gel and then shifted to the PVDF membranes, which were later processed with primary and secondary antibodies. Primary antibodies against BAALC (ab251772), E-cadherin (ab53226), N-cadherin (ab18203), Slug (ab106077), Twist (ab49254), and the loading control GAPDH (ab9485), as well as the secondary antibody horseradish peroxidase-linked goat anti-rabbit IgG (ab205718), were all from Abcam (Cambridge, UK). Finally, the proteins were observed via ECL system (Santa Cruz Biotechnology, Santa Cruz, CA).
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