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Alexa fluor 594 donkey anti rabbit

Manufactured by Jackson ImmunoResearch
Sourced in United States

Alexa Fluor 594 donkey anti-rabbit is a fluorescent secondary antibody used for the detection and visualization of rabbit primary antibodies in various immunoassays and imaging applications.

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8 protocols using alexa fluor 594 donkey anti rabbit

1

Immunohistochemical Identification of VP

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Rats were deeply anesthetized using isoflurane and current from a 6 V battery was passed through 4 of the 16 nichrome electrode wires. Rats were transcardially perfused with 0.9% biological saline and 4% paraformaldehyde in a 0.2 M Potassium Phosphate Buffered solution. Brains were extracted and post-fixed in a 10% neutral-buffered formalin solution for 24 h, stored in 10% sucrose/formalin, frozen at −80 °C and sectioned via sliding microtome. In order to identify VP boundaries, we performed immunohistochemistry for substance P (primary antibody, rabbit anti-substance P, 1:100, Immunostar, Hudson, WI; secondary antibody, Alexa Fluor 594 donkey anti-rabbit, Jackson ImmunoResearch Laboratories, West Grove, PA), and NeuroTraceTM (1:200, Thermo Fisher Scientific, Waltham, MA). Sections were mounted on coated glass slides, coverslipped with Vectashield mounting medium without DAPI (Vector Laboratories, Burlingame, CA), and imaged using a fluorescent microscope (Axio Imager Z2, Zeiss, Thornwood, NY).
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2

Immunofluorescent Imaging of Human Islet Cells

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Human islets were trypsinized so that a cell suspension was obtained, and then transferred to a clearly defined area of poly-lysine glass slides using a Cytospin 4 centrifuge (Thermo Scientific, Waltham, MA, USA). Thereafter cells were fixed with 4% (w/v) paraformaldehyde for 5–10 min at room temperature, blocked for 30 min using 2% BSA, permeabilized with 0.1% Tris-NaCl for 10 min, and stained overnight with the following primary antibodies: rabbit anti-GDF15 (Abcam, 1:250), guinea pig anti-insulin (Fitzgerald, Sudbury, MA, USA, 1:250), and mouse anti-glucagon (Thermo Fischer Scientific, 1:1000). All slides were washed with phosphate-buffered saline (PBS) and, prior to counterstaining, with diluted secondary antibodies: ALEXA Fluor 594 donkey anti-rabbit (Jackson, bar Harbor, ME, USA, 1:250), ALEXA Fluor 488 donkey anti-guinea pig (Jackson, 1:250), and ALEXA Fluor 594 goat anti-mouse (Life technologies, Carlsbad, CA, USA, 1:250) for 1 h at room temperature. Cells were washed with PBS and then mounted with Biotium’s (Freemont, CA, USA) EverBrite™ mounting medium containing 4’,6-diamidino-2-phenylindole (DAPI) for nuclei staining. Images were taken and analyzed with a Nikon Eclipse C1/TE2000-U microscopy (Nikon, Konan, Tokyo, Japan).
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3

SARS-CoV-2 Spike Protein and ER-alpha Localization

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The vibratome lung sections were rinsed and incubated for 1 h in 0.1 M PB supplemented with 4% BSA and 0.3% Triton X-100. Sections were then incubated with cocktails of primary antibodies: rabbit anti-SARS-CoV-2 Spike Protein (1:100, Invitrogen, #MA5–36087) + rat anti-ERα H222 (1:100, Santa Cruz Biotechnology, #sc53492) overnight at 4°C. After rinsing 3 × 10 min in PB, sections were incubated in a cocktail of the corresponding fluorescence secondary antibodies: Alexa-Fluor-594-donkey anti-rabbit (711-585-152, Jackson ImmunoResearch Laboratories) + Alexa-Fluor-488-donkey anti-rat (712-545-153, Jackson ImmunoResearch Laboratories) for 2 h at room temperature. After rinsing, sections were mounted on slides. Fluorescent images were collected with a Zeiss LSM880 with Cy7.5 Confocal System (Zeiss). Images were taken sequentially with different lasers with 20× objectives.
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4

Immunolabeling of Transgenic Mouse Brain Tissue

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Mice were anesthetized with Beuthansia (0.2 ml, i.p.; Merck) and perfused transcardially with PBS followed by 4% PFA in PBS. Brains were post-fixed overnight in 4% PFA at 4 °C, cryoprotected in 30% sucrose, frozen in OCT compound (ThermoFisher), and stored at −80 °C. Coronal sections (30 μm) were cut on a cryostat (Leica Microsystems) and collected in cold PBS. For immunohistochemistry experiments, sections were washed three times in PBS with 0.2% Triton X-100 (PBST) for 5 min and incubated in blocking solution (3% normal donkey serum in PBST) for 1 h at room temperature. Sections were incubated overnight at 4 °C in blocking solution with primary antibodies including chicken-anti-GFP (1:10000, Abcam, ab13970) and rabbit-anti-dsRed (1:2000, Takara Bio, 632496). After 3 washes in PBS, sections were incubated for 1 h in PBS with secondary antibodies: Alexa Fluor 488 donkey anti-chicken, Cy5 donkey anti-chicken, Alexa Fluor 594 donkey anti-rabbit, and/or Cy5 donkey anti-rabbit (1:500, Jackson ImmunoResearch). The tissue was washed 3 times in PBS, mounted onto glass slides, and coverslipped with Fluoromount-G (Southern Biotech). Fluorescent images were acquired using a confocal microscope. All digital images were processed in the same way between experimental conditions to avoid artificial manipulation between different datasets.
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5

Colonic T-reg and CD3+ T Cell Analysis

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The frequency of Treg and CD3 + T cells in colonic biopsies were evaluated using fluorescent immunohistochemistry as previously described.18 (link) Two primary antibodies from Abcam (Cambridge, MA, USA), mouse monoclonal Anti-CD3 antibody [Clone PS1] (Cat No. ab699), and Rabbit monoclonal Anti-FoxP3 antibody [clone SP97] (Cat No ab99964), were incubated in a sequential manner with two secondary antibodies from Jackson Immunoresearch (West Groove, PA, USA), Alexa Fluor® 594 Donkey Anti-rabbit, and Alexa Fluor® 488-Donkey Anti-Mouse. The number of colonic Treg and CD3 + T cells were recorded by using Zeiss LASER scanning confocal microscopy (LSM710; Carl Zeiss GmbH, Jena, Germany) with high-power field (1HPF = 0.4 mm2). Ten HPFs were examined in each slide and averaged. Data were calculated as % frequency of Treg as the follows:
%frequencyofTregcells=AveragenumberofTregcells/HPF×100AveragenumberofCD3+Tcells/HPF
Liver biopsies were not available for immunohistochemistry staining of intrahepatic Treg.
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6

SARS-CoV-2 S Protein Immunostaining

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The vibratome lung sections were rinsed and incubated for 1 hour in 0.1 M PB supplemented with 4% BSA and 0.3% Triton X-100. Sections were then incubated with cocktails of primary antibodies: rabbit anti-SARS-CoV-2 S protein (1:100; Invitrogen, #MA5-36087) + rat anti-ERα H222 (1:100; Santa Cruz Biotechnology, #sc53492) overnight at 4°C. After rinsing 3 × 10 min in PB, sections were incubated in a cocktail of the corresponding fluorescence secondary antibodies: Alexa Fluor 594–donkey anti-rabbit (Jackson ImmunoResearch Laboratories, 711-585-152) + Alexa Fluor 488–donkey anti-rat (Jackson ImmunoResearch Laboratories, 712-545-153) for 2 hours at RT. After rinsing, sections were mounted on slides. Fluorescent images were collected with a Zeiss LSM 880 with Cy7.5 Confocal System (Zeiss). Images were taken sequentially with different lasers with 20× objectives. Images were quantified with the “cell counter” plug-in in ImageJ (NIH).
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7

Immunofluorescence Staining of Cellular Markers

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To characterize the expression of different cellular markers in vitro, cells were fixed in 4% paraformaldehyde/PBS for 15–30 min, washed twice with PBS, and blocked with 3% donkey serum in PBS for 1 hr at room temperature. For nuclear or intracellular staining, cells were permeabilized with 0.3% Triton-X100 for 30 min at room temperature. Samples were incubated in primary antibodies overnight at 4 °C, and then washed with PBS before fluorescent-conjugated secondary antibodies were added and incubated for 1 hr at room temperature. Finally, the cells were rinsed and counterstained with DAPI. Stained samples were imaged directly on a Zeiss confocal microscope or LEICA inverted fluorescent microscope. Primary antibodies and their dilutions were as follows: GFP (1:1000, Abcam), Tuj1 (1:200, Abcam), TH (1:500, Pel-Freez Biologicals), PITX3 (1:200, Abcam), nestin (1:100, Santa Cruz), and DCX (1:200, Santa Cruz). Secondary antibodies included Alexa Fluor 488 donkey anti-chicken (1:200, Jackson ImmunoResearch, 703-545-155), Alexa Fluor 594 donkey anti-mouse (1:200, Jackson ImmunoResearch, 715-585-150), and Alexa Fluor 594 donkey anti-rabbit (1:200, Jackson ImmunoResearch, 711-585-152).
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8

Electrode Placement and Perfusion Histology

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Rats were deeply anesthetized using isoflurane and final electrode coordinates were marked by passing current from a 6 V battery through 4 of the 16 nichrome electrode wires. Rats were transcardially perfused with 0.9% biological saline and 4% paraformaldehyde in a 0.2 M Potassium Phosphate Buffered solution.
Brains were extracted and post-fixed in a 10% neutral-buffered formalin solution for 24 h, stored in 10% sucrose/formalin, frozen at -80°C and sectioned via sliding microtome. In order to identify VP boundaries, we performed immunohistochemistry for substance P (primary antibody, rabbit anti-substance P, Immunostar, Hudson, WI; secondary antibody, Alexa Fluor 594 donkey anti-rabbit, Jackson ImmunoResearch Laboratories, West Grove, PA), and NeuroTrace TM (1:200, Thermo Fisher Scientific, Waltham, MA). Sections were mounted on coated glass slides, coverslipped with Vectashield mounting medium without DAPI (Vector Laboratories, Burlingame, CA), and imaged using a fluorescent microscope (Axio Imager Z2, Zeiss, Thornwood, NY). Electrode placements were reconstructed by subtracting the distance driven between recording sessions from the final recording site. All the recording sites within the boundaries of VP were included in analyses 68 .
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