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13 protocols using alexa fluor 488 conjugated goat anti mouse secondary antibody

1

Quantifying MSC-Driven Angiogenesis in Wound Healing

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CD31 and α-SMA were detected by immunofluorescence staining to study MSC-induced angiogenesis during wound healing. Briefly, skin tissue excised from the wound sites was fixed in 4% paraformaldehyde, dehydrated in 30% sucrose solution, embedded in OCT, and cut into 4-μm-thick sections perpendicular to the wound surface. The sections were blocked in 1% BSA for 30 min at 23–25°C, incubated with rabbit anti-CD31 (1:100; Abcam, Cambridge, UK), and mouse anti-α-SMA (1:50; Abcam) antibodies overnight at 4°C, and then stained with secondary Alexa-Fluor 594-conjugated goat anti-rabbit and Alexa-Fluor 488-conjugated goat anti-mouse secondary antibodies (Abcam, 1:200) and counterstained with DAPI. Images were acquired using an Olympus IX81 microscope (Tokyo, Japan). The mature vessels were detected as CD31 and α-SMA double-positive vascular structures.
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2

Visualizing Blood Clot Composition on Implants

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LCSM was performed to visualize the deposited blood components. After fixation with 4% PFA, a rinse with PBS, permeabilization with 0.5% Triton X-100 for 5 min at RT. SLA and PT implants were blocked in bovine serum albumin (BSA) for 15 min, and then separately incubated with anti-human fibrin antibody (GeneTex, GTX19079, United States) for fibrin, monoclonal anti-integrin α2β-CD41 (Santa, sc-365938, United States) for platelets, monoclonal antiCD62p-P-selectin (Santa, sc-8419, United States) for activated platelets and monoclonal antiCD14 (Santa, sc-515785, United States) for monocytes/macrophages at 4°C overnight. Alexa Fluor 488-conjugated goat anti-mouse secondary antibodies (Abcam, ab150113, Britain) were used for the detection. The F-actin and nuclei were labeled with rhodamine-phalloidin and DAPI. Stained and mounted titanium implants were imaged and analyzed with an LCSM. A confocal z-stack was used to quantify the conformation and components of clots.
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3

Angiogenesis Quantification During Wound Healing

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Alpha smooth muscle actin (-SMA) and CD31 were detected by immunofluorescence staining to study Exo-induced angiogenesis during wound healing. Briefly, skin tissue excised from the wound sites was fixed in 4 % paraformaldehyde, dehydrated in 30 % sucrose solution, embedded in OCT, and cut into 4-μm-thick sections perpendicular to the wound surface. The sections were blocked in 1 % BSA for 30 min at 23-25 °C, incubated with rabbit anti-CD31
(1:100; Abcam, Cambridge, UK) and mouse anti--SMA (1:50; Abcam) antibodies overnight at 4 °C, and then stained with secondary Alexa-Fluor 594-conjugated goat anti-rabbit and Alexa-Fluor 488-conjugated goat anti-mouse secondary antibodies (Abcam, 1:200) and counterstained with DAPI. Images were acquired using an Olympus IX81 microscope. Newly formed vessels were indicated by CD31-positive staining, whereas mature vessels were detected as CD31 and α-SMA double-positive vascular structures. The numbers of newly formed and mature vessels were counted in five random fields per section between wound edges using Image-Pro Plus 6.
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4

Immunofluorescent Analysis of HIF1α in 2D and 3D MEC Cells

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Fixed low-passage poorly-differentiated human MEC cells from 2D and 3D culture were incubated overnight at 4 °C with mouse monoclonal antibodies against HIF1α (1:200; Abcam). After rinsing in PBS, cells were further incubated with Alexa Fluor 488-conjugated goat anti-mouse secondary antibody (1:500; Abcam) and rinsed. Negative controls included omission of primary or secondary antibodies and substitution of primary antibodies with isotype controls. After mounting in anti-fading mounting medium (Beyotime, Beijing, China), stained cells were visualized and imaged with a fully motorized, Olympus IX83 inverted wide-field epifluorescence microscope with a DP80 CCD camera under the monochromatic mode controlled by Olympus cellSens Dimension software (Olympus; Tokyo, Japan).
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5

Immunocytochemical Analysis of Hemocyte Binding

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The immunocytochemical assay was conducted as previously described [28 (link)] with some modification. Briefly, hemocytes collected from healthy shrimp were suspended in the 5% BSA containing resuspending solution [29 (link)], seeded in a cell culture dish (NEST, Wuxi, China) for 3 h, and incubated with rMBP-HSSP-His (50 μg/mL) at room temperature. The same concentration of rMBP-His was used as the negative control. The hemocytes were fixed on dishes with 4% paraformaldehyde prepared in PBS (pH 7.4) for 15 min at room temperature, and washed three times in TBS (50 mM, Tris–HCl, 150 mM NaCl, pH 7.4). After blocking in 5% BSA in TBS at 4 °C overnight, the hemocytes were incubated with mouse anti-MBP antibody (ABclonal, Wuhan, China) in a dilution of 1:500 at room temperature for 1 h, and then incubated with Alexa Fluor 488-conjugated goat anti-mouse secondary antibody (Abcam, Shanghai, China) at a dilution of 1:1000 at room temperature for 1 h. Hemocytes were dyed with Di1 (Beyotime, Shanghai, China) for 20 min and DAPI (Beyotime, Shanghai, China) for 5 min before the observation under a laser confocal scanning microscopy (Carl Zeiss LSM 710, Carl Zeiss, Oberkochen, Germany).
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6

Immunofluorescence Visualization of E165R Protein

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The full-length E165R gene was amplified by PCR using the synthesized construct as the template (Table S1). The PCR product was cloned into pCAGGS-HA vector (Addgene, Teddington, UK) using EcoR I and Xho I restriction sites. PK15 cells (porcine kidney cell) were transfected with 500 ng of plasmid per well in a 24 well plate. The culture medium was replaced with DMEM supplemented with 10% FBS at 6 h post transfection. The cells were fixed with 3% paraformaldehyde for 30 min before being washed 3 times with PBS and then incubated with anti-E165R mAb (1:500) or anti-HA tag mAb (NO: ab18181; Abcam, Cambridge, UK) (1:1000). After 1 h of incubation at 37 °C, cells were washed 3 times with PBS and subsequently incubated with Alexa Fluor-488-conjugated goat anti-mouse secondary antibody (NO: ab150113; Abcam, Cambridge, UK) (1:500) at 37 °C for 1 h. Following the washing step 3 times with PBS, the cells were observed under the OLYMPUSIX IX73 plore Standard fluorescence microscope (OLYMPUSIX, Tokyo, Japan).
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7

Immunocytochemical Analysis of Neurite Outgrowth

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Following treatment for five days, cells in transparent collagen IV-coated plates were washed twice with phosphate-buffered saline (PBS) at room temperature and fixed for 5 min using absolute methanol (precooled to -20 °C). Cells were washed thrice with ice-cold PBS and incubated with blocking buffer PBST (1% (w/v) bovine serum albumin/10% (v/v) normal goat serum/0.3 M glycine in PBS containing 0.1% (v/v) Tween-20) for 1 h. Cell body and processes were then labeled with an anti-βIII-tubulin mouse primary antibody (1 µg/mL; Abcam, Cambridge, UK) diluted in PBST containing 1% (w/v) bovine serum albumin at 4 °C overnight, followed by an Alexa Fluor 488-conjugated goat anti-mouse secondary antibody (2 µg/mL; Abcam, Cambridge, UK) for 1 h at room temperature, protected from light. For nuclear staining, cells were counterstained with Cellstain® 4′,6′-Diamidino-2-phenylindole (DAPI; Dojindo Molecular Technologies, Kumamoto, Japan) for 10 min at 37 °C. Plates were then subjected to image acquisition and analysis of neurite outgrowth.
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8

Cytokeratin Expression Analysis in BOECs

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Fourth-generation BOECs were seeded in 6-well slides. When the cell monolayers reached approximately 90% confluency, they were fixed with cold acetone for 15 min and washed with PBS. The cells were subsequently blocked
with 10% goat serum and incubated with a primary antibody against cytokeratin (ab668; Abcam) at 4°C overnight, followed by an Alexa Fluor® 488-conjugated goat anti-mouse secondary antibody (Abcam) for 2 h. A mouse IgG
isotype control (R&D Systems, Minneapolis, MN) was used in this study.
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9

Immunofluorescent Staining of GCLC

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1×105 cells were seeded on glass coverslips and grew for three days. Cells were washed three times with PBS and fixed in 4% paraformaldehyde, permeabilized in 0.25% Triton X-100 and then blocked with 5% goat serum. Sections were incubated with GCLC primary mouse antibody (1:100, sc-390811, Santa Cruz, CA, USA) overnight at 4°C. After washed with PBST for three times, the coverslips were incubated with Alexa Fluor® 488-conjugated goat anti-mouse secondary antibody (1:100, Abcam, Cambridge, UK. Cat No#ab150117) for 2 hours in dark. Neclei were counterstained with 2-(4-Amidinophenyl)-6-indolecarbamidine dihydrochloride (Beyotime, Shanghai, China. Cat No#C1005). All the sections were observed under a fluorescence microscope (Olympus).
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10

Immunofluorescence Analysis of Osteogenic Differentiation

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Specimens cultured in osteogenic medium for 7, 14 and 21 days were fixed with 2% (w/v) paraformaldehyde (Nacalai Tesque Inc., Kyoto, Japan) for 15 min. They were incubated with PBS, containing 0.25% Triton X-100 (Sigma) (PBS-T) for 10 min for permeabilization, and then incubated in PBS-T with 1% (w/v) bovine serum albumin (Sigma) for 30 min to block non-specific binding [16 (link)]. Specimens were incubated with a rat anti-osteocalcin (OCN) antibody (1:200 dilution, Takara Bio Inc., Kusatsu, Japan) and rabbit anti-osteopontin (OPN) antibody (1:1000 dilution, Abcam, Cambridge, MA, USA) for 1 h, followed by an incubation with an Alexa Fluor® 488-conjugated goat anti-mouse secondary antibody (1:1000 dilution, Abcam) and Alexa Fluor® 555-conjugated goat anti-rabbit secondary antibody (1:1000 dilution, Abcam) for 1 h. Specimens were also incubated with 4′,6-diamidino-2-phenylinole (DAPI) (InvitrogenTM/Life Technologies) diluted in PBS for 5 min to identify nuclei. Immunofluorescence images were evaluated using immunofluorescence microscopy (Leica M165FC, Leica Microsystems, Nussloch, Germany).
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