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4 protocols using rs320 x ray machine

1

Colorectal Cancer Cell Lines and Fibroblasts

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The human CRC cell lines LS180, RKO, SW48, HCT15, HCT116 and Colo320DM were obtained from ATCC (LGC Standards, Wesel, Germany). LS180, RKO and SW48 were kept in MEM (Invitrogen) supplemented with 15% FBS, 1% essential amino acids and antibiotics. HCT15, HCT116 and Colo320DM were kept in RPMI (Invitrogen) supplemented with 10% FBS plus antibiotics. Adult dermal fibroblasts (HDFa, PCS-201-012) and neonatal fibroblasts (HDFn, PCS-201-010) were obtained from ATCC. Fibroblasts were cultured with fibroblast basal medium (FBM, PCS-201-030 from ATCC) supplemented with low serum fibroblast growth kit (ATCC, PCS-201-041). Cells were cultivated at 37 °C in 5% CO2. Irradiation was done using the RS320 X-Ray machine by XStrahl Ltd. at 300 kV, 10 mA, dose rate 0,9 Gy/min.
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2

ARID1A Status in Colorectal Cancer Cell Lines

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The human CRC cell lines with mutant (LS180, RKO, SW48) and wild-type (HCT15, HCT116 and Colo320DM) ARID1A were obtained from ATCC (LGC Standards, Wesel, Germany) and were designated as ARID1A- and ARID1A+ cells, respectively. LS180, RKO and SW48 cells were grown in MEM (Invitrogen, ThermoFisher Scientific, Waltham, Massachusetts, USA) supplemented with 15% fetal bovine serum (FBS), 1% essential amino acids and antibiotics. HCT15, HCT116 and Colo320DM cells were grown in RPMI (Invitrogen) supplemented with 10% FBS and 1% antibiotics. U2OS and A549 cells harboring reporters for HR (DR-GFP) were grown as a monolayer in McCoy’s 5A medium supplemented with 10% FBS and antibiotics. All cells were maintained at 37°C in 5% CO2. Irradiation was carried out using a RS320 X-Ray machine (XStrahl Ltd, Walsall, UK) operating at 300 kV, 10 mA, at a dose rate of 0,9 Gy/min.
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Senescence Induction in Mesenchymal Stem Cells

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Irradiation-induced senescence of MSCs was performed by a 20 Gray protocol (20 Gy) using ionising radiation by a RS320 X-Ray machine (X-Strahl, Camberley, UK). P3 MSCs at 60-70 % confluence in T175 flasks were used for the irradiation protocol. Cells were exposed for 22 min. After irradiation, cells were left in the flask for 48 h, trypsinised, seeded at 9,600 nc/cm 2 and cultured for another 3-5 d to allow for senescence to occur. At day 7 post irradiation β-galactosidase staining was performed. Control cells underwent the same protocol and exposed to a 0 Gy irradiation. Following trypsinisation, they were re-seeded at 2,300 nc/cm 2 .
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4

Senescent MSC Chondrogenesis Assay

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Senescence was induced in the cells by 20 Gy ionizing radiation using an RS320 X-Ray machine (X-Strahl, Camberley, United Kingdom) (Voskamp et al., 2021 (link)). MSCs in a monolayer were irradiated in a T175 flask (60%–70% confluency) for 22 min (20 Gy). Then, 24 h post-irradiation, the cells were trypsinized and seeded at a 9,600 cell/cm2 density. Mock-irradiated MSCs were used as non-senescent controls and seeded at 2,300 cells/cm2. Seven days post-irradiation, irradiated and non-irradiated MSCs were trypsinized, mixed (0, 25, 50, 75%, and 100% irradiated versus non-irradiated cells), and centrifuged at 300 g for 8 min to obtain pellets of 2 × 105 cells. To induce chondrogenesis, cell pellets were cultured in a chondrogenic medium, containing a DMEM-HG medium (Invitrogen brand Thermo Fisher Scientific), supplemented with 1% ITS (BD, Franklin Lakes, NJ, United States), 1.5 μg/mL fungizone (Invitrogen brand Thermo Fisher Scientific), 50 μg/mL gentamicin (Invitrogen brand, Thermo Fisher Scientific), 1 mM sodium pyruvate (Invitrogen brand, Thermo Fisher Scientific), 40 μg/mL proline (Sigma-Aldrich), 10 ng/mL TGFβ1 (R&D Systems), 0.1 mM ascorbic acid-2-phosphate (Sigma-Aldrich), and 100 nM dexamethasone (Sigma-Aldrich) for 7, 14, or 21 days. The medium was renewed twice a week.
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