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5 protocols using isopentenyl pyrophosphate ipp

1

Expansion of human γδ T cells

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PBMC from healthy donors were isolated from fresh buffy coats by Lympholyte (Cedarlane) density gradient centrifugation. Cells were cultured at a concentration of 4×106/ml in the presence of IL-2 (6.5 U/ml), IL-15 (10 ηg/ml) (both from Sigma-Aldrich), TGF-β (1.7 g/ml; Calbiochem) and isopentenyl pyrophosphate (IPP; 20 µg/ml; Sigma). On days 3, 6, and 9, half of the supernatant volume was discarded and replaced with fresh medium containing cytokines. Aliquots of PBMC and bead-sorted γδ T cells (Miltenyi Biotec) were used fresh or were frozen for use at later time points.
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2

Assessing γδ T cell Cytokine and Cytotoxic Responses

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PBMCs (2 × 105 cells/well in triplicate) were stimulated with either uninfected RBCs (uRBCs) or iRBCs (6 × 105/well) for 24 h or isopentenyl pyrophosphate (IPP, 3 μM, Sigma-Aldrich, St Louis, MO, USA) for 16 h. Brefeldin A (10 μg/ml, Sigma-Aldrich) and monensin (BD Biosciences) were added to the cells for the last 8 h of incubation. Assessment of γδ T cell cytokine production was performed by intracellular cytokine staining using allophycocyanin (APC)-conjugated anti-IFN-γ (clone B27, BD Biosciences) and PE-Cy7-conjugated anti-tumor necrosis factor alpha (TNF-α) (clone MAb11, eBioscience, San Diego, CA, USA), and cytotoxic capacity was assessed by Brilliant Violet 421-conjugated anti-CD107a (clone H4A3, Biolegend) staining in culture. A positive response was determined as the frequency of responding cells, which was twice above background and was ≥0.1% IFN-γ, TNF-α, or CD107a-positive γδ T cells of all γδ T cells or ≥0.5% positive γδ T cells of γδ T cell subsets following subtraction of background.
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3

Purchasing Reagents for Scientific Research

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(E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate (HMBPP), capsaicin, savory oil, boric acid, fipronil sulfone and hydrochloric acid were purchased from Sigma-Aldrich (St. Louis, Missouri, USA); isopentenyl pyrophosphate (IPP), from Sigma-Aldrich (Tampa, USA, LC). The anti-coagulant/preservative, citrate-phosphate-dextrose-adenine was purchased from Vacuette (Greiner Bio-One Kremsmünster, Austria). 4-Aminobenzoic acid was purchased from Sigma-Aldrich Sweden (Stockholm, Sweden).
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4

Preparation of Krebs-Ringer Bicarbonate Solutions

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Potassium chloride (KCl), sodium chloride (NaCl), magnesium sulphate (MgSO 4 ), calcium chloride (CaCl 2 ), glucose (C 6 H 12 O 6 ), potassium phosphate (KH 2 PO 4 ), sodium carbonate (NaHCO 3 ), barium chloride (BaCl 2 ), and ethylenediaminetetraacetic acid (EDTA) were obtained from Lach-Ner s.r.o. (Neratovice, Czech Republic) and used to prepare Krebs-Ringer bicarbonate solution and Ca 2+ -free Krebs-Ringer bicarbonate solution.
Other substances: serotonin (5-HT; purity ≥98%), nicardipine (NCP; purity ≥98%), CRV (purity ≥98%), N (gamma)-nitrol-arginine methyl ester (L-NAME; purity ≥98%), tetraethylammonium (TEA; purity ≥99.5%), 4-aminopyridine (4-AP; pu-rity ≥99%), glibenclamide (GLB; purity ≥ 99%), and isopentenyl pyrophosphate (IPP; purity ≥95%) were purchased from Sigma Aldrich (St. Louis, MO, USA), while (±) BAY K 8644 (purity ≥97.5%) was purchased from Cayman Chemical Company. Their stock solutions were prepared either in distilled water or in 99.9% ethanol, according to their solubility, and the subsequent dilutions were carried out in distilled water. All solutions were kept at 0-4 • C when not used in experiments.
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5

IPP-Induced IFN-γ Production Assay

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For this experiment, 100 μl of heparinized whole blood was dispensed into 96 well plates (BIORAD, USA) in duplicate and was stimulated with or without 50 μM isopentenyl pyrophosphate (IPP) (Sigma Aldrich, USA) in RPMI 1640 medium supplemented with 10% Fetal Calf Serum, 1% L -glutamine, penicillin, and streptomycin. After 24 h incubation in 5% CO2 incubator at 37 °C, supernatants were harvested from each well for detection of IPP-specific IFN-γ production using an Enzyme Linked Immunosorbent Assay (ELISA) (BIORAD, USA).
The data obtained in the presence of stimuli exhibited Optical Density (OD values above unstimulated controls, but were low and in the non-linear portion of the IFN-γ standard curve. Considering the extrapolation of OD values to IFN-γ concentrations therefore unreliable, and since all culture supernatants were evaluated by ELISA in the same experiment, we opted to simply express data as OD units in the presence of stimulus less that in the absence of stimulus.
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