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13 protocols using primocin

1

Derivation and Characterization of Osteoblast-like Cells from Pediatric Fibulas

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HBO cell lines were derived from healthy fibulas of seven pediatric subjects under appropriate Institutional Review Board approval, Segments of the fibulas were digested using Collagenase A (0.1 mg/mL) treatment for 40 minutes with replacement of Collagenase A midway at 20 minutes and then digested with 0.2 mg/ml of Collagenase A for 60 minutes at 37°C with intermittent shaking. The segments of bone were maintained in DMEM + Primocin + 10% FBS + 50 μM ascorbic acid (Sigma, 49752) + 10nM dexamethasone. Media changes were done every 5 days. Osteoblast-like cells began to grow out of the bone segments by Day 10. These cells can be passaged and frozen for storage. On addition of Osteogenic media (DMEM + Primocin + 10% FBS + 50 μM ascorbic acid + 10 nM dexamethasone + 10 mM beta-glycerophosphate disodium (Sigma, G9422), the cells form mineralized nodules indicating their osteogenic ability as seen in Supplementary Figure 1.
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2

Adipocyte Differentiation Protocol

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The cells at confluence were treated with induction cocktail (high glucose DMEM (#61965), 10% FBS, 50 μg/ml Primocin, 0.5 mM IBMX (Sigma #15879), 1 μM dexamethasone (Sigma #D2915), 1.7 μM insulin (Sigma #19278), 0.2 mM indomethacin (Sigma #I7378) for 7 days), followed by maintenance cocktail treatment (high glucose DMEM, 10% FBS, 50 μg/ml Primocin, 1.7 μM insulin) for another 7 days.
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3

Canine Cancer Cell Lines

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Canine transitional cell carcinoma cells (K9TCC) was obtained from Prof. Knapp, Purdue (PU, Indiana, USA), canine osteosarcoma cell (Abrams) were obtained from Prof. Rebhurn, (UCD, California, USA) and canine hemangiosarcoma cells (DAL‐4) were obtained from Kerafast Inc. (Massachusetts, USA). The K9TCC and Abrams cells were grown in Dulbecco's modified eagle's medium (Gibco) containing 10% fetal bovine serum (FBS) (Gibco), 100 units/ml of penicillin (Gibco), 100 μg/ml of streptomycin (Gibco) and 10 mM of 4‐(2‐hydroxyethyl)‐1‐piperazineethanesulfonic acid buffer (Gibco) and incubated at 5% CO2 and 37°C. The three cell lines are described as TCC (transitional cell carcinoma, K9TCC), OSA (osteosarcoma, Abrams) and hemangiosarcoma (HSA, DAL‐4) in figures and text.
The DAL‐4 cells were grown in Ham F‐12 (Gibco) containing 10% FBS (Gibco), 100 μg/ml of primocin, 0.05 mg/ml of endothelial cell growth supplement, 0.1 mg/ml of heparin (Sigma‐Aldrich®), 10 mM of HEPES buffer (Gibco) and incubated at 37°C in 5% CO2 humidified incubator. All cell lines were free of mycoplasma.
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4

Isolation of Human Airway Cells

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After NITB sample collection, sample was incubated in Advanced DMEM/F12 (Life Technologies; 12634‐034) supplemented with GlutaMax (Life Technologies; 12634‐034), HEPES (Life Technologies; 15630‐056), penicillin (10,000 IU/ml) and streptomycin (10,000 IU/ml) (Life Technologies; 15140‐122) (AdDF+++) with 100 µg/ml Primocin (InvivoGen; ant‐pm1) for transport. Samples were shipped at 4°C overnight to Utrecht, The Netherlands. Human airway cells were isolated, processed and cultured as described previously (Sachs et al, 2019 (link)). In short, cells were spun down and supernatant was removed. Cells clumps were mechanically sheared using narrowed glass pipette to remove mucus. Cells were resuspended in AdDF+++ supplemented with 100 µg/ml Primocin, 1.25 mM NAc (Sigma‐Aldrich; A9165), 0.15% Pronase E (Sigma‐Aldrich; 7433‐2) and 0.5 mg/ml collagenase (Sigma‐Aldrich, C9407) and incubated for 20 min at 37°C. Samples were washed twice with AdDF+++ with Primocin and spun down at 300× g for 5 min. The resulting pellet was resuspended in ice‐cold 70% 10 mg/ml cold Cultrex growth factor reduced BME type 2 (Trevigen; 3533‐010‐02) in airway organoid medium.
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5

Intestinal Organoid Culture Protocol

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Wash Media consisted of Advanced DMEM/F12 medium supplemented with HEPES [1x, Invitrogen], Glutamine [1x, VWR] or Glutamax [1x, Invitrogen] and Primocin [1x, 50 mg/mL, InvivoGen].
Digestion Media consisted of wash media supplemented with collagenase type IV from Clostridium histolyticum [5 mg/mL, Gibco] and Dispase [1 mg/mL, Sigma].
Complete Growth Media consisted of 50% wash media without FBS, 50% conditioned media [Wnt3a/R-Spondin/Noggin, L-WRN ATCC] supplemented with B27 [1x, Invitrogen], Nicotinamide [10 mM], N-acetyl-L-cysteine [1.25 mM, Sigma], Primocin [100 μg/mL], mNoggin [100 ng/mL], human epidermal growth factor [hEGF, 50 ng/mL, Peprotech], human fibroblast growth factor 10 [100 ng/mL, Peprotech], Gastrin [10 nM, Sigma], A 83–01 [500 nM, Tocris], PGE2 [1 μM, R&D Systems] and Y-27632 [10.5 μM, Sigma].
Cell Recovery Solution (Corning), Recovery Cell culture Freezing Medium (Thermo Fisher).
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6

Establishment of Colonoid Monolayers

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Colonoid monolayers were established from colonoid cultures harvested after 7 days. To establish a monolayer, approximately 200 colonoids were completely disaggregated with the help of a 27‐gauge needle. Approximately 100 μl of cell suspension in IntestiCult Organoid Growth medium (Human) (Stemcell Technologies) with 10 μM Y‐27632 and 100 μg/ml Primocin (InvivoGen) were seeded on permeable polyester filter insert (Corning Transwell, pore size 0.4 μM) coated with 10 μg/ml human collagen IV (Sigma‐Aldrich) solution, in 24‐well plates.27 An additional 50 and 600 μl of IntestiCult Organoid Growth medium with Y‐27632 and Primocin was added to the Transwell filter and the well, respectively, and kept in culture for 3 days. Then, expansion medium was substituted with differentiation medium, where 50% v/v IntestiCult (Component B) was substituted by DMEM/Ham's F‐12. The differentiation medium was replaced with fresh differentiation medium after 2 days and colonoid monolayers were then kept in culture for one additional day to reach 3 days of differentiation.
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7

Endometrial and Menstrual Stem Cell Decidualization

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Early (2p.–7p.) and late (15p.–19p.) passages of endometrial and menstrual blood mesenchymal stem cells were selected to undergo decidualization in vitro. Decidualization was induced by culturing cells with 0.5 μM dibutyryl cyclic-AMP (db-cAMP) (BioGems International, Inc., Westlake Village, CA, USA) and 1 μM medroxyprogesterone acetate (MPA) (Cayman Chemical Company, Ann Arbor, MI, USA) agents at 1.5 × 104 cells/cm2 density. Decidualization medium, used for whole differentiation period consisted of: RPMI (phenol free) medium (Corning Incorporated, NY, USA), 2% Charcoal Stripped Fetal Bovine Serum (Gibco, Thermo Scientific, NY, USA) and 50 μg/ml primocin (Sigma Aldrich, MO, USA). Selected decidualization time was 3 and 6 days, cells were cultured under selected conditions of 37°C, 5% CO2 in an incubator. During decidualization every other day the medium was replaced with the same fresh medium and filtered through 0.2 μm filter. Undifferentiated EndSCs and MenSCs were used as a control group in later experiments.
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8

Sheep iPSC Culture Protocol

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Sheep kidney cells (SKCs) were isolated from Chinese Merino fetuses (∼45 d) that were derived from a livestock slaughterhouse in Shihezi City (China) and cultured in Dulbecco’s modified Eagle medium (DMEM; Gibco) supplemented with 10% fetal bovine serum (FBS; Gibco), 1% non-essential amino acids (NEAA; Gibco), penicillin-streptomycin (100×, Coolaber, China), and 100 μg/ml Primocin (Invitrogen). ICR mouse embryonic fibroblasts (MEFs; Cyagen, China) were treated with mitomycin C (Sigma) as feeder layers and cultured in SKC medium without Primocin. Sheep iPSCs were cultured on inactivated ICR MEFs in DMEM/F12 medium (Gibco) supplemented with 20% KnockOut Serum Replacement (Gibco), 1% NEAA, 1% GlutaMAX (Gibco), 0.1 mM β-mercaptoethanol (Sigma), 4 ng/ml basic fibroblast growth factor (bFGF; Peprotech), 1 μg/ml doxycycline hyclate (DOX; Sigma), 50 μg/ml vitamin C (Vc; Sigma), and 1 mM valproic acid (VPA; Sigma). Embryoid body (EB) formation medium (Cyagen, China) was composed of 440 ml basal medium, 50 ml fetal bovine serum, 5 ml NEAA, 500 μl 2-mercaptoethanol, 5 ml L-glutamine, and 5 ml penicillin-streptomycin.
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9

Skeletal Muscle Cell Culture Protocols

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Mouse skeletal myoblast C2C12 cells, purchased from American Tissue Culture Collection (Manassas, VA), were maintained as previously described17 (link). FACS sorted mouse skeletal muscle satellite cells, obtained from Eric Olson (UT Southwestern Medical Center) and prepared as previously described53 (link), were maintained with daily replenishment of medium consisting of Ham’s F-10 containing 20% FBS with 0.1 mg/ml Primocin (Invitrogen) and 5 ng/mL bFGF (Gibco) on Matrigel (BD Biosciences)-coated plates. To induce differentiation, myoblasts were cultivated in DMEM containing 2% horse serum (with 0.1 mg/ml Primocin for mouse muscle satellite cells) with or without 10 μg/mL insulin (Sigma Aldrich, St. Louis, MO) (DM or DM + I). All cell culture products were purchased from Gibco (Grand Island, NY) unless otherwise noted. Rapamycin and PD 0332991 (Selleckchem, Houston, TX) were resuspended in DMSO and used at concentrations as indicated.
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10

Isolation and Purification of Hair Follicle Melanocytes

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Isolation and purification of hair follicle melanocytes (HFMs) from scalp hairs was carried out as originally previously described in Tobin, et al.62 (link) with modifications63 (link). Cell lineage identity was confirmed by GP100 and TRP-1 expression. Melanocytes were maintained in full 2:1 melanocyte growth media (2 parts minimal essential medium (MEM) supplemented with 1% foetal bovine serum (FBS), 1% nonessential amino acids, 100 µg/ml Primocin, 2 mM Glutamax, 5 ng/ml basic fibroblast growth factor, and 5 ng/ml endothelin-1 (Sigma, Dorset, UK) mixed with 1 part keratinocyte serum-free medium (K-SFM) supplemented with 25 µg/ml bovine pituitary extract (BPE), 0.2 ng/ml rEGF, 100 µg/ml Primocin (antibiotic), and 2 mM Glutamax in humidified incubators at 37 °C with 5% CO2 unless stated otherwise.
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