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9 protocols using invia reflex system

1

SERS analysis of LasR ligand binding

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SERS measurements were conducted with a Renishaw InVia Reflex system. The spectrograph used a high-resolution grating (1800 grooves cm–1) with additional band-pass filter optics, a confocal microscope and a 2D-CCD camera. Laser excitation was carried out at 785 nm (diode) with a 20× objective (N.A. 0.4), 4.7 mW power and 10 s acquisition time. The substrates were immersed in a solution of 10 mM sodium phosphate buffer at pH 8.0 containing ca. 0.5 nmol of purified LasRLBD and incubated for 16 h at 4 °C. Then, the different ligand molecules were added at the indicated concentrations and incubation was carried out at room temperature until SERS measurements.
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2

Raman Spectroscopy Measurement Protocol

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Measurements were carried out on a Renishaw inVia Reflex system in which a microscope is equipped with an encoded sample stage. Measurements were performed using 532 (Renishaw DPSSL laser, 50 mW) and 633 nm (Renishaw HeNe laser, 17 mW) excitation. Data shown in the manuscript was acquired using 633 nm filtered to 5% of maximum intensity in conjunction with an 1800 lines/mm grating, unless otherwise stated. Raman spectra were analyzed using the Renishaw WiRE 5.2 software package. Data processing included baseline subtraction (sample shown in Fig. S1) and spectrum normalization.
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3

SERS Characterization Using Renishaw InVia

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SERS experiments
were conducted in
a Renishaw InVia Reflex system, composed of a confocal microscope,
a CCD camera, high-resolution diffraction gratings (1200 grooves cm–1), monochromatic light source (laser 785 nm), and
optical components (filters and lenses).
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4

Comprehensive Material Characterization Protocol

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The chemical composition was determined using EDS (Oxford Instruments X-Max detector integrated with Zeiss' Ultra scanning electron microscope). The metal content was determined at 10 or more randomly selected areas on each sample and the average was taken as the intercalant concentration.
XRD measurements were performed using Bruker D8 Discover diffractometer with Cu Kα radiation (λ=1.5406 Å). Before each measurement, samples were roughly ground and mixed with paraffin oil, and then sealed in an airtight XRD sample holder (Bruker, A100B36/B37) inside the glovebox. XRD spectra were obtained at room temperature in the 2θ range of 5–75° with a step of 0.03° and a dwell time of 0.5 s per step.
Raman spectroscopy was performed at room temperature using the Renishaw inVia Reflex system with a 532 nm laser. All spectra were recorded using a power of ∼1 mW with the samples sealed between two thin glass plates.
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5

Characterization of Functionalized Nanoparticles

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UV-Vis spectroscopy (Lambda 19, PerkinElmer) and transmission electron microscopy (TEM, JEOL JEM-1011 operating at 100 kV) were used to characterize the optical response, structure, and size of the nanoparticles during the functionalization process. To characterize the codification process, SERS spectra were collected in backscattering geometry with a Renishaw Invia Reflex system equipped with a 2D-CCD detector. The spectrograph used a high resolution grating (1200 g cm−1) with additional band-pass filter optics. A 785 nm diode laser was focused onto the colloidal solution ([Ag0] = 0.1 mM) by a long-working distance objective (0.17 NA, working distance 30 mm). The spectra were acquired with an exposure time of 100 ms (depending on Raman intensity saturation) and a laser power at the sample of ca. 300 mW.
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6

Comprehensive Characterization of Material Samples

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The morphology information was determined by the FEI Sirion 200 scanning electron microscope (SEM) and the JEOL 2100F transmission electron microscope (TEM). Samples were characterized by X-ray diffraction (XRD, Rigaku Ultima IV X-ray Diffractometer) equipped with Cu Kα radiation. Surface composition of the sample was analyzed by X-ray photoelectron spectroscopy (XPS, AXIS ULTRA DLD, Kratos, Japan). Raman spectroscopy was conducted using the Renishaw inVia-reflex system at room temperature. A laser with the wavelength of 532 nm was used as the excitation source. Inductively coupled plasma-atomic emission spectrometry (ICP-AES, Thermo, iCAP7600) was used for detecting the concentrations of Mo and Ti ions. Thermogravimetric analysis (TGA) was carried out using a thermogravimetric analysis instrument (TGA, SDT Q600 V8.2 Build 100).
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7

Characterization of MoS2 Domains

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Optical microscope (OM) images of MoS2 domains were observed using the Nikon Eclipse Ti-U (Nikon, Tokyo, Japan) and Mshot MJ30 (Mshot, Guangzhou, China). Scanning electron microscopy (SEM) images were acquired using a FEI Quanta 450. Raman (FEI Quanta, Hillsboro, OR, USA) and photoluminescence (PL) spectroscopy were performed using a Renishaw inVia Reflex system (Renishaw, Wharton Andech, UK) with a Leica dark-field microscope. The wavelength of the excitation laser was 532 nm, and the focus diameter was approximately 1 μm. The surface feature and film thickness of MoS2 domains were measured by an atomic force microscope (AFM, NTEGRA Spectra, NT-MDT, Moscow, Russia).
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8

Comprehensive Characterization of Nanomaterials

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SEM images were obtained using a JSM-6510LV and a JEM-2100F microscope (JEOL, Tokyo, Japan). TEM images were recorded by a Talos F200x electron microscope (FEI Co., USA). XRD (D8A25; Bruker, Germany) was used to determine the crystal structure of the samples. XPS (ESCALAB 250Xi; Thermo Scientific, USA) was employed to disclose the surface elemental compositions of the samples. UPS was measured using an ESCALAB 250Xi instrument with a monochromatic He I light source (21.2 eV). An InVia reflex system (Renishaw) operating at 532 nm was employed to obtain Raman spectra. The JC2000D Contact Angle System (POWEREACH, China) was used to measure the water contact angles of the samples at room temperature. A UV-Vis-NIR spectrometer (UV-3600; Shimadzu, Tokyo, Japan) was used to obtain the spectra of samples.
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9

Multifunctional Materials Characterization

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A UV-visible spectrophotometer (UV2500, Shimadzu, Kyoto, Japan), Renishaw Invia Reflex system equipped with Peltiercooled charge-coupled device (CCD) detectors and a Leica microscope, Transmission Electron Microscope (Hitachi, H-7650). Radiation experiments were carried out on samples using Co-60 radioactive sources (Hangyu Irradiation Technology Co., Ltd, Nanjing, China).
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