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6 protocols using goat anti mouse igg hrp

1

Analysis of NF-κB Protein Expression

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The total proteins from thymic samples were extracted as described previously19 (link). The protein samples (10 μg/lane) were separated on 12% SDS-PAGE gels, and then transferred to polyvinylidene fluoride membranes (Millipore, Bedford, MA, USA). Blot analysis was performed with a mouse anti-NF-κB1 monoclonal antibody (Santa Cruz Biotechnology, Inc., sc-8414, 1:1000), a mouse anti-NF-κB2 monoclonal antibody (Santa Cruz Biotechnology, sc-7386, 1:1000), a mouse anti-RelA monoclonal antibody (Santa Cruz Biotechnology, sc-8008, 1:1000), a mouse anti-RelB monoclonal antibody (Santa Cruz Biotechnology, sc-166416, 1:1000), and a mouse anti-c-Rel monoclonal antibody (Santa Cruz Biotechnology, sc-6955, 1:1000) at 4 °C overnight, respectively. Then, the membranes were washed and incubated with goat anti-mouse IgG-HRP (horseradish peroxidase) secondary antibody (Biosharp, BL001A, 1:2000) for 1 h at room temperature. Chemiluminescent substrate was used according to the manufacturer’s instructions (Tiangen Biotech) to detect immunoreactive protein. An anti-GAPDH antibody (Santa Cruz Biotechnology, sc-20357, 1:1000) was applied as an internal control protein. The blots were exposed to X-ray film, and densitometry of autoradiograms was performed using Quantity One V452 (Bio-Rad Laboratories). Relative expression levels of target proteins were normalized using the GAPDH.
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2

Immunohistochemical Localization of IκBβ and IKKγ in Liver Tissue

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The fixed hepatic tissues were treated as described previously [26 (link)]. The anti-IκBβantibody (Santa Cruz Biotechnology, sc-390622, 1:200) and anti-IKKγantibody (Santa Cruz Biotechnology, sc-166398, 1:200) were used for immunohistochemical localization of IκBβ and IKKγ in the liver tissue. After being rinsed three times for 5 min, sections were incubated with goat anti-mouse IgG-HRP (Biosharp, Hefei, China, BL001A) in a 1:1000 dilution. The negative control was treated with goat anti-mouse IgG instead of IκBβ and IKKγ antibodies. A DAB kit (Tiangen Biotech Co., Ltd., Beijing, China) was used to visualize the antibody binding sites, and then the nucleus was stained with haematoxylin. Tissue sections were photographed using a light microscope (Nikon Eclipse E800, Tokyo, Japan) with a digital camera (AxioCam ERc 5s), and the intensity of staining was analysed through the photos by two investigators in a blinded fashion. The intensity of staining was scored on a scale of 0 to 3:0, no staining; 1, weak staining; 2, strong staining; 3, stronger staining, as described previously [24 (link)].
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3

Modulation of Autophagy and Apoptosis

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After 24 h of aloin, chloroquine, rapamycin and starvation administration, HOS and MG-63 cell lines were lysed in RIPA buffer with protease and phosphatase inhibitor cocktail. Protein samples of same amount were separated by western blot. Blot intensity was analyzed by Image J (v1.51). The primary antibodies applied in this research were as follows: AKT, ATG5, Beclin1, Bcl-2, bcl-xl, cleaved caspase 3, cleaved caspase 7, cleaved caspase 9, cleaved PARP, mTOR, pho-mTOR (SER2448), pho-AKT (SER473), PI3Kα (p110), SQSTM1 (P62), LC3B. Beta-actin was used as internal reference. The secondary antibodies were as follows: goat anti-rabbit IgG–HRP (1:2000, Biosharp) and goat anti-mouse IgG–HRP (1:2000, Biosharp).
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4

Immunofluorescence and Western Blot Analysis

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The CRFK cells (LMAI Bio, Shanghai, China) were seeded into 6-well plates with optimum culture medium and transfections were performed when the cell monolayer density reached 70%. The transfection mixture (containing the pcMV-3-scFv) was added into each well and incubated for 4 h at 37 °C in moist 5% CO2. At 48 h post-transfection, the cells were fixed with paraformaldehyde (4%), permeabilized with Triton X-100 (0.5%) and incubated with BSA (Beyotime, Shanghai, China) to block nonspecific binding sites. They were incubated with diluted His-tag antibody (100 µL; Affinity Biosciences, OH, USA) for 2 h then washed with PBS. Goat anti-Mouse IgG (H + L) Fluor 594-conjugated (1:800; Affinity Biosciences, OH, USA) was added. The stained cells were visualized by use a Nikon Eclipse 80i fluorescence microscope (Nikon, Sendai, Japan). Total protein of the cells transfected 48 h were extracted for western blot; His-tag antibody and Goat anti-Mouse IgG HRP (Biosharp, Hefei, China) were used as primary and secondary antibodies, respectively. ICA was performed as described in [17 (link)].
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5

Western Blot Analysis of Protein Extracts

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Total protein was extracted from cells and tissues using RIPA lysis buffer (#P0013B, Beyotime, Beijing, China). Protein concentrations were quantified using the BCA protein assay kit (#BL521A, Biosharp, Beijing, China). Protein samples were mixed with SDS–PAGE loading buffer (#MB2479, Meilunbio, Dalian, China), separated on a SDS-PAGE gel, and transferred to PVDF membranes. The membranes were incubated overnight at 4°C with primary antibodies against TNFα (26405-1-AP, 1:2000, Proteintech), phosphorylated P65 (p-P65) (AP0475, 1:2000, ABCLONAL, Woburn, MA, USA), total P65 (66535-1-Ig, 1:2000, Proteintech), and GAPDH (10494-1-AP, 1:5000, Proteintech). Next, the membranes were incubated with goat anti-rabbit IgG-HRP (BL003A, 1:5000, Biosharp) or goat anti-mouse IgG-HRP (BL001A, 1:5000, Biosharp) secondary antibodies. ECL color exposure was used to detect immunoreactive bands. An Odyssey Infrared Imaging System (Li-COR Biosciences, Lincoln, NE, USA) was used to quantify protein bands, using GAPDH as the internal reference.
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6

Antibody Panel for m6A RNA Modifications

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The following antibodies were used: anti-m6A antibody (202003, Synaptic Systems, 1:1000 for Dot blot, 1:100 for Immunofluorescence), Mouse Anti-NeuN antibody (ab104224, Abcam,1:500) rabbit anti-ALKBH5 antibody (ab195377, Abcam, 1:1000), rabbit anti-METTL3 antibody (ab195352, Abcam, 1:1000), mouse monoclonal to FTO (ab92821, Abcam, 1:1000), BCL-2 antibody (AF6139, Affinity, 1:1000), rabbit anti-Bax antibody (ab32503, Abcam, 1:5000), Akt (4691T, Cell Signaling Technology, 1:1000), Phospho-Akt-Ser473 (4060S, Cell Signaling Technology, 1:1000), mTOR (2983T, Cell Signaling Technology, 1:1000), Phospho-mTOR-Ser2448 (5536T, Cell Signaling Technology, 1:1000), PARP (9542T, Cell Signaling Technology, 1:1000), β-Actin polyclonal antibody (AP0060, Bioworld Technology, 1:1000), Goat anti-rabbit IgG-HRP (BL003A, Biosharp Life Sciences, 1:5000), Goat anti-mouse IgG-HRP(BL001A, Biosharp Life Sciences, 1:5000), Dylight 594-donkey anti-rabbit IgG (E032421-01, Earthox, 1:500), Dylight 488-donkey anti-mouse IgG (E032211-01, Earthox, 1:500). Other reagents information is listed in Supplementary Materials.
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