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21 protocols using ampicillin

1

Antibiotic Susceptibility Profiling

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Susceptibility to 13 antibiotics was determined by the disc diffusion method and using the ADAGIO™ Automated System (Bio-Rad, Hercules, CA, USA) as described. The antibiotics tested included ampicillin (10 µg), penicillin (6 µg), ampicillin/sulbactam (20 µg), chloramphenicol (30 µg), vancomycin (5 µg), teicoplanin (30 µg), streptomycin (300 µg), gentamicin (120 µg), ciprofloxacin (5 µg), levofloxacin (5 µg), quinupristin-dalfopristin (15 µg), linezolid (30 µg) and tigecycline (15 µg) (Bio-Rad, Hercules, CA, USA)]. Susceptibility to aminoglycosides, glycopeptides, quinolones and β-lactam antibiotics was also determined by an E-test (M.I.C. Evaluator™, OXOID, Basingstoke, UK). The methods and the interpretation of the results followed the CLSI guidelines [32 ]. Enterococcus faecalis ATCC 29212 and Staphylococcus aureus ATCC 25923 were used as control strains.
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2

Evaluating Antibiotic Resistance in CTX-R E. coli

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The antibiotic susceptibilities of CTX-R E. coli and their transconjugants were determined by disk diffusion method according to CLSI protocols (19 ). The following antibiotic disks were used: ampicillin (10 μg), amoxicillin (20 μg) plus clavulanic acid (10 μg), cefoxitin (30 μg), ceftazidime (30 μg), cefotaxime (30 μg), cefepime (30 μg), aztreonam (30 μg), imipenem (10 μg), streptomycin (10 μg), gentamicin (10 μg), kanamycin (30 μg), nalidixic acid (30 μg), ciprofloxacin (5 μg), tetracycline (30 μg), chloramphenicol (30 μg), trimethoprim (5 μg), and sulfonamides (300 μg) (Bio-Rad, Marnes-la-Coquette, France if available or Oxoid, Dardilly, France). The susceptibility breakpoints for all antimicrobials were those recommended by CLSI (20 ).
ESBL production was detected by double-disk synergy test on Mueller-Hinton agar between clavulanic acid and ceftazidime, cefotaxime, or cefepime (20 , 21 (link)). AmpC beta-lactamases detection was based on the inhibitory effect of cloxacillin on AmpC production observed on plates supplemented with 200 mg/L cloxacillin. The control strains used were E. coli ATCC 25922, K. pneumoniae ATCC 700603, and K. pneumoniae CMY-2 from Pr R. Bonnet, France.
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3

Antibiotic Susceptibility Testing Protocol

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Antibiotic susceptibility was performed by the disc diffusion method on Mueller Hinton agar (Bio-Rad, Marne la Coquette, France) according to the recommendations of the Antibiogram Committee of the French Society for Microbiology (Comité de l’Antibiogramme de la Société Française de Microbiologie) [9 ]. The following antibiotic discs (drug concentration in μg) were tested: amoxicillin (25 μg), amoxicillin/clavulanic acid (20/10 μg), ampicillin (10 μg), imipenem (10 μg), cefotaxime (30 μg), ceftriaxone (30 μg), ciprofloxacin (5 μg), norfloxacin (5 μg), amikacin (30 μg), gentamicin (15 μg) and trimethoprim/ sulfamethoxazole (1.25/23.75 μg), all from Bio-Rad (Bio-Rad, Marne la Coquette, France).
ESBL phenotypes were detected by double-disk synergy according to the method described by Jarlier et al. [10 (link)]. Disks of cefotaxime and ceftriaxone were placed 20 mm from an amoxicillin/clavulanate disk. Enhancement of the inhibition zone of the third-generation cephalosporin toward the amoxicillin/clavulanate disk indicated the possible presence of an ESBL. Escherichia coli ATCC 25922 was used as control.
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4

Antibiotic Susceptibility of Enterococci

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A bacterial suspension of density equivalent to a MacFarland of 0.5 was used to inoculate an MH agar plate using a sterile swab. An Etest® (Biomérieux, Marcy-l’Etoile, France) containing ciprofloxacin was loaded onto the agar and incubated overnight at 37 °C before MIC determination. In parallel, an antibiogram of Enterococci was performed by disk diffusion method using the following molecules (Bio-Rad, Hercules, CA, USA): ampicillin (2 µg), imipenem (10 µg), norfloxacin (10 µg), rifampicin (5 µg), erythromycin (10 µg), clindamycin (2 µg), quinuspristin-dalfopristin (15 µg), tigecycline (15 µg), linezolid (10 µg), levofloxacin (5 µg), gentamicin (30 µg), streptomycin (300 µg), vancomycin (5 µg), teicoplanin (30 µg), nitrofurantoin (100 µg), fosfomycin (200 µg). The interpretations were carried out according to the European Committee on Antimicrobial Susceptibility Testing (EUCAST) guidelines (https://www.eucast.org/clinical_breakpoints, 2022).
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5

Antibiotic Susceptibility Screening Protocol

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Antibiotic susceptibility testing was performed by the disc diffusion method on Mueller Hinton agar according the standard recommendations of the French Society of Microbiology (CA-SFM, 2010) [8 ]. The following antibiotic discs were tested: ampicillin, amoxicillin+ acid clavulanic, ticarcillin, cefalotin, cefoxitin, cefuroxime, cefotaxim, imipenem, nalidixic acid, aztreonam, norfloxacin, ciprofloxacin, gentamycin, tetracycline, trimethoprim-sulfamethoxazole, streptomycin (Bio-Rad, France). For carbapenems, ertapenem (10 μg/ml) antibiotic discs were used (Bio-Rad, France). The zones of inhibition were measured to assess resistance or susceptibility.
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6

Antibiotic Susceptibility Profiling

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Antibiotic susceptibility was determined by the disk diffusion method, on Mueller-Hinton (MH) agar, in accordance with the guidelines of the Antibiogram Committee of the French Society for Microbiology (CA-SFM 2006)39 . The following antimicrobial drugs (Bio-Rad, Marnes-la-Coquette, France) were tested: ampicillin (AMP), cefalotin (CEF), cefotaxime (CTX), streptomycin (STR), chloramphenicol (CHL), azithromycin (AZM), sulfonamides (SUL), trimethoprim-sulfamethoxazole (SXT), vibriostatic agent O/129 (O129), tetracycline (TET), nalidixic acid (NAL), ciprofloxacin (CIP), nitrofurantoin (FUR), polymyxin B (PB) and colistin (CS). Escherichia coli CIP 76.24 (ATCC 25922) was used as a control.
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7

Antibiotic Susceptibility Testing Protocol

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Antibiotic susceptibility was determined by disc diffusion on
Mueller–Hinton agar, in accordance with the guidelines of the Antibiogram
Committee of the French Society for Microbiology [22 ]. The following antimicrobial drugs (Bio-Rad, Marnes-la-Coquette,
France) were tested: ampicillin, cefalotin, cefotaxime, streptomycin,
chloramphenicol, erythromycin, azithromycin, sulfonamides,
trimethoprim-sulfamethoxazole, vibriostatic agent O/129, tetracycline,
doxycycline, minocycline, nalidixic acid, norfloxacin, ofloxacin, pefloxacin,
ciprofloxacin, nitrofurantoin, polymyxin B and colistin (polymyxin E).
Escherichia coli CIP 76.24 (ATCC 25922) was used as a
control. The minimum inhibitory concentrations (MICs) of nalidixic acid and
ciprofloxacin were determined by Etests (bioMérieux, Marcy
L'Etoile, France). The MICs of colistin and polymyxin B were determined
with custom-produced Sensititre microtitre plates (Thermo Fisher Scientific,
East Grinstead, UK) and MIC test strips (Liofilchem, Roseto degli Abruzzi,
Italy), respectively, on 34 isolates chosen on the basis of resistance
phenotype, year and country of isolation.
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8

Antibiotic Sensitivity Profiling of S. aureus

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The confirmed S. aureus isolates were subjected to antibiotic sensitivity test with linezolid (Bio-Rad), methicillin, ampicillin, ampicillin-sulbactum, amoxicillin-clavulanic acid, ticarcillin-clavulanic acid, imipenem-ethylenediaminetetraacetic acid, piperacillin-tazobactam, cefotaxime, ceftizoxime, ceftriaxone, ceftriaxone-tazobactam, enrofloxacin, ciprofloxacin, vancomycin and gentamicin antibiotic discs procured from HiMedia, India following CLSI (Clinical & Laboratory Standards Institute) guidelines [21 ].
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9

Antibiotic Susceptibility Testing of Campylobacter

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The disk diffusion assay was performed in accordance with the method described by the antibiogram committee of the “French Society of Microbiology” CA-SFM/2014. All isolates were tested for their susceptibility to the following antibiotics: Amoxicillin/clavulanic acid (20/10 μg), ampicillin (10 μg), erythromycin (15 IU), tetracycline (30 IU), gentamicin (10 μg), ciprofloxacin (5 μg), and chloramphenicol (30 μg) (Bio-Rad, France).
From a pure culture of 18-24 h, the bacterial suspension was adjusted to match the 0.5 McFarland turbidity standard. A sterile swab was immersed into the adjusted suspension and then seeded by swabbing onto the entire surface of Mueller-Hinton agar supplemented with 5% defibrinated horse blood and β-NAD (MH-F). After streaking, the inoculum was dried for 5-10 min, and four antimicrobial disks were placed onto the surface of the plate. The plates were incubated at 37°C for 24 h under a microaerophilic atmosphere. Inhibition zones were measured by a caliper, and diameters were interpreted as recommended by the Antibiogram Committee of the French Society of Microbiology [8 ]. C. jejuni ATCC 33560 and C. coli ATCC 33876 were used as control strains.
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10

Rosin-based Biopolymer Synthesis

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Rosin acid was supplied from the local market (Egypt). The commercial grade rosin is provided in a solid grains form of resin obtained from conifers as reported elsewhere32 . Tetrahydrofuran is supplied by Sigma Aldrich. Ampicillin and gentamicin were suplied from (Bio-Rad, France). All used microorganisms were obtained from the Environmental Research Department, Theodor Bilharz Research Institute (TBRI), Egypt. All reagents were analytically pure and were not further purified.
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