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24 protocols using cy3 conjugated goat anti rabbit igg

1

Immunofluorescence Staining of OPN

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Transfected cells grown on glass coverslips were fixed for 30 min in 4% paraformaldehyde and permeabilized with 0.5% Triton X-100 (Promega) in PBS buffered saline for 30 min. After washing with TBS-0.1% Triton X-100 (TBSTx), nonspecific binding sites were blocked with TBSTx-5% BSA (Roche) for 60 min. Then cells were applied sequentially with a 1:100 dilution of rabbit polyclonal antibody anti-OPN (Abcam) at 4°C overnight and a 1:200 dilution of Cy3-conjugated goat anti-rabbit IgG (Beyotime) at room temperature for 60 min in the dark. For negative control, PBS was added instead of primary antibody. Further, immunofluorescence was visualized under a laser-scanning confocal microscope (Zeiss, Oberkochen, Germany).
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2

Vimentin Role in M. pneumoniae Adhesion

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To determine whether vimentin is a key receptor protein for the adhesion of M. pneumoniae and rP1-C to host cells, a series of adhesion and adhesion inhibition experiments were performed with the following groups: (i) blank control groups, (ii) anti-vimentin antibody preincubation group, and (iii) vimentin preincubation group. The cells were added to 24-well plates (5 × 105 cells/well) and incubated at 37°C for 24 h. After cultivation for 48 h, group i was incubated with rP1-C (0.5 mg/mL) or M. pneumoniae (5 × 105 CCU/mL) for 2 h. Group ii was preincubated with mouse anti-vimentin antibody (1:200) or rabbit anti-vimentin antibody (1:200) before incubation with rP1-C or M. pneumoniae, and group iii cells were incubated with rP1-C or M. pneumoniae that had been pretreated with vimentin (0.2 mg/mL). Nonimmune rabbit or rat IgG served as a control. Anti-rP1-C antibody and anti-M. pneumoniae antibody were incubated at 37°C for 2 h. Cy3-conjugated goat anti-rabbit IgG (1:200; A0516; Beyotime) or Cy3-conjugated goat anti-mouse IgG (1:200; A0521; Beyotime) was then added to the wells, followed by incubation for 1 h at 37°C. After staining with DAPI, the cells were imaged using a laser scanning confocal microscope (LSCM; Zeiss, Germany).
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3

Immunofluorescence Analysis of LC3-II

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Briefly, the cells in each group were plated onto coverslips and cultured overnight with or without LIG. Afterwards, the cells were fixed with 4% paraformaldehyde (Beyotime, Wuhan, China) for 40 minutes at room temperature and washed with phosphate-buffered saline containing 0.1% Triton X-100 (Beyotime). The cells were incubated with primary antibodies (rabbit anti-microtubule-associated protein l light chain 3B (LC3-II) polyclonal antibody; 1:400; #ab48394, Abcam, Cambridge, UK) overnight, followed by Cy3-conjugated goat anti-rabbit IgG (1:400; #A0516, Beyotime) at 37°C for 1 hour. The cells were imaged under a confocal microscope (Olympus, Tokyo, Japan) and analyzed using Image J software (NIH, Bethesda, Maryland, USA).
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4

Immunohistochemical Analysis of Aquaporin-4 and GFAP Expression

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After being deparaffinized and rehydrated, the slices were antigen-retrieved in antigen retrieval buffer and blocked with goat serum. Then, the slices were incubated with AQP4 antibody (rabbit anti-AQP4 antibody; 1: 50 diluted in PBS; Proteintech) and glial fibrillary acidic protein (GFAP) antibody (mouse anti-GFAP antibody; 1: 50 diluted in PBS; Santa Cruz, Dallas, TX, USA) overnight at 4°C. After being rinsed in PBS, the slices were incubated with corresponding secondary antibodies (Cy3-conjugated goat anti-rabbit IgG, FITC-conjugated goat anti-mouse IgG; 1: 200 diluted in PBS; Beyotime) for 90 min at room temperature in the dark. Thereafter, the slices were rinsed in PBS and incubated with DAPI (4′,6-diamidino-2-phenylindole) (Beyotime) for nuclear counterstaining. The slices were observed using a fluorescence microscope (OLYMPUS; model: BX53) with a 400× magnification.
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5

Immunofluorescence Staining of α-SMA

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Cells grown on glass slides were fixed with 4% paraformaldehyde for 20min, washed with PBS, permeabilized with 0.1% Triton X-100 at room temperature for 5min, and then blocked with 1% BSA (BSA, #A3912, Sigma) for 30min to inhibit non-specific binding. Next, the cells were incubated overnight with α-SMA antibody (#ab124964, Abcam) at 4°C. The next day, the α-SMA antibody was removed, and cells were incubated with Cy3-conjugated goat anti-rabbit IgG (#A0516, Beyotime) at room temperature for 1h. The nucleus was counter stained with DAPI (#C1002, Beyotime). Images were taken using an Evos FL Auto2 microscope (Thermo Fisher Scientific).
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6

Immunofluorescence Staining of Cell Markers

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The indicated cells were seeded in 24-well plates and incubated for 24 h before being stained. For these experiments, in which we stained the cells for E-cadherin and vimentin, we fixed the cells in 4% paraformaldehyde and then permeabilized them in 0.1% Triton X-100 at room temperature. After being blocked for 1 h with blocking solution, the cells were incubated with the appropriate primary antibodies overnight at 4 °C, after which they were incubated with FITC or Cy3-conjugated goat anti-rabbit IgG (Beyotime, China) at 37 °C before being counterstained with DAPI to visualise the nuclei. Fluorescence was imaged using a Leica microscope.
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7

Immunofluorescent Analysis of Cell Spheroids

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The cell spheroids were washed with phosphate-buffered saline (PBS) supplemented with 0.5% Tween20 (PBST) and fixed in methyl alcohol. Subsequently, the spheroids were blocked with 5% bovine serum albumin for 2 h at room temperature. Cells were then incubated with rabbit anti-CD133 and EpCAM antibodies (dilution 1:100) at 4°C overnight. After being washed with PBST, cells were incubated with cy3-conjugated goat antirabbit IgG (dilution 1:200) (Beyotime). 4′,6-Diamidino-2-phenylindole (DAPI) (Sigma, St. Louis, MO, United States) was used to stain the nucleus for 15 min. The fluorescent images were captured using a fluorescence microscope (Olympus IX-70, Tokyo, Japan).
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8

Immunofluorescence Assay for Pyroptosis

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The pyroptosis of Raw 264.7 cells was tested by immunofluorescence assay. Briefly, cells were grown on glass coverslips, washed thrice with PBS for 3 min, fixed with PBS containing 4% formaldehyde for 15 min, and permeabilized with 0.5% Triton X-100 for 20 min. After washing with PBS thrice for 3 min, cells were incubated overnight at 4 ℃ with the antibody against GSDMD (Abcam, UK). They were then washed with PBS and incubated with Cy3-conjugated goat anti-rabbit Ig G (Beyotime Biotechnology, China). Nuclei were stained with DAPI (Beyotime Biotechnology, China). Finally, coverslips were observed using a fluorescence microscope.
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9

Immunofluorescence Analysis of Metastatic Lung Tissues

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Metastatic lung tissues were embedded in paraffin and sectioned, and then immunofluorescence staining was carried out according to a published protocol.25 (link) Primary Abs against E‐cadherin (1:200; 20874‐1‐AP) and vimentin (1:300; 10366‐1‐AP) were obtained from Proteintech. The DAPI DNA dye was obtained from Beyotime Biotechnology. The secondary Ab was a cy3‐conjugated goat anti‐rabbit IgG (Beyotime Biotechnology). All stained tissues were examined and photographed under a NEXcope (NE900) confocal fluorescence microscope (Ningbo Yongxin Optics Co., Ltd).
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10

rFgTPx Localization in Goat PBMCs

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Freshly collected goat PBMCs were treated with rFgTPx for 1 h at 37 °C in a humidified atmosphere with 5% CO2. The cells were pelleted by centrifugation at 300× g for 10 min and washed three times in PBS to remove unbound proteins. The goat PBMCs were fixed in 4% paraformaldehyde for 10 min at ambient temperature, washed three times in ice-cold PBS (5 min each), and then blocked with PBS containing 4% BSA for 1 h. The rFgTPx–treated or non–treated (control) goat PBMCs were incubated with primary rabbit anti–rFgTPx antibody (1:500) for 1 h at 37 °C. After incubation, the cells were washed three times in PBS and stained with Cy3-conjugated goat anti-rabbit IgG (1:500) (Beyotime, Haimen, Jiangsu, China). The cells were washed five times after being incubated with secondary antibody at 37 °C for 1 h. Hoechst 33,342 (Invitrogen, Eugene, OR, USA) was used to counterstain the cell nuclei. Immunofluorescence-labeled cell preparations were analyzed using a Zeiss laser scanning microscope (LSM710, Zeiss, Jena, Germany) with the 63× oil-immersion objective and Zeiss operating system associated with the ZEN imaging program.
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