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44 protocols using rolipram

1

Tau Seeding and Modulation in Cell Lines

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Seeded tau aggregation was performed as described (12 (link)). Twenty-four h before experiments, HEK 293T cells were transfected with pcDNA3.1 encoding human P301S 1N4R tau and pM6P encoding galectin-8 fused to YFP using Lipofectamine 2000 (Invitrogen). SH-SY5Y cells were transfected with pcDNA3.1 encoding human P301S 1N4R tau using Lipofectamine 2000 according to Ref. 49 (link). Cells were split into 6- or 24-well dishes and grown overnight. The medium was then replaced with assembled tau seeds (500 nm monomer equivalent) diluted in OptiMEM with GlutaMAX. After 3 h, the seed-OptiMEM mixture was replaced with growth medium and cells were grown for 48 h. Bafilomycin A1 (Sigma, 2 nm), rapamycin (Sigma, 50 nm), 3-methyladenine (Sigma, 10 mm), rolipram (Tocris, 50 μm), and MG132 (Sigma, 1 μm) were added to the growth medium during the 48-h growth period. Cells were analyzed by Western blotting or immunofluorescence staining.
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2

Induction and Maintenance of cLTP and cLTD

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cLTP was induced on DIV16 using a previously validated protocol [6 (link),19 (link),20 (link),21 (link)]. The neurons were incubated in artificial cerebrospinal fluid (ACSF, 125 mM NaCl, 25 mM KCl, 2 mM CaCl2, 33 mM glucose and 25 mM HEPES) + 1 mM MgCl2 for 30 min at 37 °C. cLTP induction was then performed in ACSF without MgCl2, plus 50 µM forskolin (Tocris, Bristol, UK), 0.1 µM rolipram (Tocris), and 100 µM picrotoxin (Tocris) for 16 min. Control groups were kept in normal ACSF. Next, the cells were incubated in ACSF with MgCl2. To induce cLTD, neuronal cultures were first incubated in ACSF for 30 min, and then stimulated with 50 µM NMDA (Sigma-Aldrich) in ACSF [21 (link),22 (link)]. After 10 min of stimulation, the NMDA solution was replaced with regular ACSF for 20 min.
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3

Signaling Pathway Characterization Protocol

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(-)-Isoproterenol hydrochloride was purchased from Sigma-Aldrich (Cat #I6504), dissolved in 100 mM ascorbic acid to 10 mM stock, and used at 1 μM final concentration. Arginine vasopressin acetate salt was purchased from Sigma-Aldrich (Cat #V9879), dissolved in water to 1 mM stock, and used at 100 nM final concentration. Dyngo-4a (AbCam, Cat #ab120689) was dissolved in DMSO to 30 mM, stored protected from light, and added to cells to 30 μM final concentration in serum-free DMEM. Protease inhibitor cocktails were purchased from Roche (Cat #04693159001, 11836170001) and used according to manufacturer recommendations. Phosphodiesterase inhibitors, IBMX (3-Isobutyl-1-Methylxanthine) purchased from Sigma-Aldrich (Cat #I5879) and Rolipram from Tocris (Cat #0905) were dissolved in ethanol to make 100 mM and 10 mM stocks, respectively. Alexa 647-conjugated mouse anti-myc antibody (Cell Signaling, Cat #2233S) was used at 1:50. Rabbit anti-phospho-PKA substrate (100G7E) antibody was purchased from Cell Signaling (Cat #9624) and used at 1:1000. Mouse anti-GAPDH antibody was purchased from Millipore (Cat #MAB374) and used at 1:1000. Secondary IRDye antibodies were purchased from Li-COR Biosciences and used at 1:10,000 in Odyssey Blocking Buffer (Li-COR Biosciences, Cat #927-50000).
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4

Monitoring EPAC1 Signaling Dynamics

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Wild type HEK293T-vector and HEK293T–EPAC1 cells were plated at 10,000 cells/well in 30 μl growth media on a corning Epic 384 well cell assay microplate (PerkinElmer), and then incubated overnight at 37 °C. Cells were then equilibrated for 2 h at room temperature and then a baseline measurement was recorded using an Enspire plate reader. The cells were then treated with varying concentrations of the EPAC1 antagonist, ESI-09 (Sigma Aldrich) or the PKA inhibitors, H-89 (Tocris) or KT5720 (Tocris), in the presence or absence of forskolin (Tocris) and rolipram (Tocris) or 007-(8-pCPT-O′-Me-cAMP) (Biolog). Dynamic mass redistribution measurements (DMR) were then taken every minute for 60 min. All treatments were made up in DMSO (Fisher Scientific) and diluted in 1 × HBSS (Life Technologies)/20 mM HEPES (Sigma Aldrich) assay buffer. For data analysis DMR readings from HEK293T-vector cells were subtracted from HEK293T–EPAC1 cells.
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5

Cardiac Contractility Regulation Assay

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The following pharmaceuticals were used: ITI-214 (provided under agreement with Intra-Cellular Therapies Inc, NY), cilostamide, forskolin, rolipram (Tocris), caffeine, nitrendipine (Millipore Sigma), Rp-cAMPS and Rp-8-CPT-cAMPS (Cayman Chemical), all but Rp-8-CPT-cAMPS dissolved in 0.1% DMSO (the latter in 0.5% DMSO). The following antibodies were used: PDE1A (Sc-50480, Santa Cruz Biotechnology), PDE1C (Ab14602, Abcam), GAPDH (5174, Cell Signaling), phospho-Ser23/24 (4004) and total TnI (4002, both Cell Signaling), phospho-Ser273, -Ser282, -Ser302 and total MYBP-C (gifts from Dr. Sakthivel Sadayappan, University of Cincinnati), phospho-Ser16 (MA3–922, Badrilla) and total PLN (MA3–922, ThermoFisher Scientific). To obtain single band detection with PDE1C Ab, we used 0.1% KPL (SeraCare) as the blocking buffer. For all other immunoblots, we used Odyssey Blocking Buffer (Li-Cor) 1:1 in TBST. Please reference the Major Resources Table for further details.
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6

NMDA-induced cLTD and cLTP in Neurons

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cLTD was induced as previously described (Oh et al., 2006 (link)). Cultures were first incubated in ACSF for 30 min at room temperature: 125 mM NaCl, 2.5 mM KCl, 1 mM MgCl2, 2 mM CaCl2, 33 mM D-glucose, and 25 mM HEPES (pH 7.3), followed by stimulation with 50 μM NMDA in ACSF (no MgCl2) for 5 min. After NMDA treatment, neurons were replaced in regular ACSF and then subjected to the corresponding procedure at indicated time points. Cultures were then washed with ice-cold PBS once and lysed in cold 1% NP-40 homogenization buffer (20 mM Tris, pH 7.5, 150 mM NaCl, 5 mM EDTA, 1 mM PMSF, 1 mM Na2VO4, and 1× Sigma protease inhibitor and phosphatase inhibitor cocktails). When indicated, cultures were pre-treated or post-treated with BAPTA-AM (20 μM), FK506 (10 μM), MG132 (10 μM), or MK801 (10 μM; all from Tocris) and were present until cells were lysed. cLTP was induced as previously described (Otmakhov et al., 2004 (link)) by application of forskolin (50 μM) and rolipram (0.1 μM; both from Tocris), 60 min before or after cLTD. Cells were lysed 60 min after cLTP or cLTD treatment. Lysates were centrifuged at 12,000 × g for 10 min at 4°C and protein in the supernatant was quantified by Bradford method assay kit (Bio-Rad Laboratories). The intensity of the cLTD protocol may vary depending on the cultures.
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7

Pharmacological Modulators of Cellular Signaling

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Prostaglandin E1, MDL12330A, cilostamide, rolipram, and erythro-9-(2-hydroxy-3-nonyl) adenine hydrochloride (EHNA) were obtained from Tocris Bioscience. MEM, penicillin/streptomycin, fetal bovine serum were purchased from Life Technologies. All other reagents were purchased from Sigma-Aldrich. Isoproterenol and IBMX solutions were prepared fresh daily.
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8

Reagents for Cyclic Nucleotide Signaling Studies

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D-glucose was purchased from Mallinckrodt Chemicals (Dublin, Ireland). IBMX (3-Isobutyl-1-methyl-1H-purine-2,6(3H,7H)-dione) was purchased from Sigma-Aldrich (St. Louis, MO). 8MM-IBMX (3-Isobutyl-8-(methoxymethyl)-1-methyl-1H-purine-2,6(3H,7H)-dione) was purchased from Santa Cruz Biotechnology (Dallas, TX). Cilostamide (N-cyclohexyl-N-methyl-4-(1,2- dihydro-2-oxo-6-quinolyloxy) butyramide), rolipram (4-[3-(cyclopentyloxy)-4-methoxyphenyl]-2-pyrrolidinone), and PF-04671536 (5-Methyl-3-[[(2R)-4-(2-thiazolylmethyl)-2-morpholinyl]methyl]-3H-1,2,3-triazolol[4 (link),5 (link)]pyrimidin-7-amine) were purchased from Tocris Bioscience (Bristol, UK). PF-04957325 (3-[[(2R)-4-(1,3-thiazol-2-ylmethyl)morpholin-2-yl]methyl]-5-(trifluoromethyl)triazolo[4,5-d]pyrimidin-7-amine) was purchased from MedChemExpress (Monmouth Junction, NJ). Unless otherwise indicated, all other reagents were purchased from Sigma-Aldrich.
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9

Pharmacological Agents for Research

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ZD7288, (RS)-(±)-sulpiride, rolipram, forskolin and ivabradine hydrochloride were purchased from Tocris Bioscience (Ellisville, MO). DCZ dihydrochloride (water soluble) was purchased from Hello Bio Inc. (Princeton, NJ). Elacridar hydrochloride was purchased from Medchemexpress LLC (Monmouth Junction, NJ). Cocaine HCl was provided by the NIDA Drug Supply Program. All other common chemicals were obtained from Sigma-Aldrich (St. Louis, MO).
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10

Monitoring Cellular cAMP/PKA Activation

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N-terminal large (LgBit) and C-terminal small (SmBit) fragments derived from NanoLuc (Promega) were fused to the C-terminus of B56δ and inserted downstream of its N-arm at residue 103, respectively. The SmBit sequence is sandwiched by a short linker sequence, “GSG” at both ends to alleviate structural hindrance for complementation with LgBit. The constructs expressing the B56δ holoenzyme conformation sensors were transfected into COS-1 cells. After 24 hours, cells were placed in 20% Nano-Glo® Live Cell Reagent (Promega) mixed with 80% DMEM containing 1% FBS. Cells were equilibrated at 37 °C in 5% CO2 in a Cytation 5 before the luminescence readings were measured every 5 minutes. Following the second reading, cells were treated with 20 μM forskolin (Tocris) and 2 μM rolipram (Tocris) to activate adenylyl cyclase and inhibit cAMP phosphodiesterase 4 (PDE4) simultaneously to activate cellular cAMP/PKA. All values were normalized to the vehicle control, and all wells were normalized to the 5-min time point (just before forskolin/rolipram treatment). The experiments were performed in quadruplicate and repeated three times. Representative results were shown. Error bars represent standard deviation.
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