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Edu labeling medium

Manufactured by RiboBio
Sourced in China

EdU labeling medium is a cell culture medium designed for the detection and analysis of DNA replication in proliferating cells. It contains the nucleoside analog 5-ethynyl-2'-deoxyuridine (EdU), which can be incorporated into DNA during DNA synthesis and subsequently detected through a click chemistry reaction.

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5 protocols using edu labeling medium

1

EdU-Labeling for Cell Proliferation

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Cells were labeled with 100 μM EdU-labeling medium (RiboBio, China) at 1 × 104 cells/well in 96-well plates. After 12 h or 24 h, cells were then treated with 4% paraformaldehyde and 0.5% Triton X-100 for 30 min followed by incubation with an anti-EdU working solution for 1 h. Nuclei were stained with DAPI. Images were acquired using a fluorescence microscope.
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2

Ethynyldeoxyuridine Assay for ADPKD Cell Proliferation

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Ethynyldeoxyuridine (EdU) incorporation assay was performed to explore the effect of modified SNX9 expression on ADPKD cell proliferation. The indicated cells were first cultured with the EdU labeling medium (RiboBio, Guangzhou, China), for 2 h. Then, the cells were fixed with 4% paraformaldehyde, for 30 min, incubated with 1% Triton X-100, for 30 min, and dyed with Apollo, for 30 min. Finally, Hoechst was used to dye DNA, and the cells were visualized with a confocal microscope.
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3

Visualizing Cell Proliferation with EdU

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Cells at 50% confluency were cultured with EdU labeling medium (RiboBio, Guangzhou, China) for 2 hours, fixed with 4% paraformaldehyde for 30 min and treated with 1% Triton X‐100 for 30 min at room temperature. After 3 washes with PBS, the cells were dyed with Apollo (RiboBio) for 30 min. Then, Hoechst (RiboBio) was used to stain the DNA in the cells, and subsequently visualized with a confocal microscope (Leica).
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4

Cell Proliferation Assay with EdU

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96-well plates were seeded at 3000 cells per well and exposed to different treatments. 50 μM EdU labeling medium (RiboBio) was added and incubated for 2 h at 37 °C. The cells were then fixed with 4% cold methanol for 10 min. After being washed with PBS, cells were stained with anti-EdU working solution for 30 min and stained with Hoechst33342 for 10 min. Cells were observed using fluorescent microscopy. The percentage of EdU-positive cells was calculated from five random fields in three wells.
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5

Cell Proliferation Assays for TPC-1 and K-1 Cells

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For CCK-8 assay, we seeded TPC-1 and K-1 cells after transfection in 96-well plates (1000 cells/well) and cultured them at 37 °C with five percent CO2. The cell viability was examined every 24 h, in brief, 10 μL CCK8 solution was added into per well. After incubation for 2 h at 37 °C, the microplate reader was utilized to detect the absorbance of all wells at an optical density of 450 nm. We planted 500 cells in 6-well plates and cultured them at 37 °C with 5% CO2 for 14 days in colony formation assay. Following being washed, the colonies were fixed in four percent paraformaldehyde for fifteen minutes, dyed by 0.1% crystal violet solution for 20 min, and finally counted manually. For Ethynyldeoxyuridine (EdU) assay, we seeded the transfected cells (density: 5000 cells/well) on ninety-six-well plates. Then, 50 μM EdU labeling medium (RiboBio, Guangzhou, China) was added to these wells and then incubated for 2 h under 5% CO2 at 37 °C. After treated with four percent paraformaldehyde and 0.5% Triton X-100, cells were stained by Apollo Dye Solution. Then Hoechst 33342 was used to stain the nucleic acids within the cells. Ultimately, we used fluorescence microscopy (Nikon, Japan) to analyze and calculate the rate of EdU-positive cells.
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