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15 protocols using anti mouse ifn γ pe

1

RBD-Induced Cytokine Response Assay

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The mononuclear cells were stimulated with or without purified RBD (8 μg/mL) for 21 hours at 37°C at 5% CO2. In the last 5 hours of culture a protein transport inhibitor, Brefeldin A, (1μL/mL) was added (BD Biosciences, USA). Cells were fixed using the BD Cytofix/Cytoperm® kit (BD Biosciences, USA) following the manufacturer’s instructions, and then labeled with conjugated antibodies to surface antigens (PerCP-Cy®5.5 anti-mouse CD3, FITC anti-mouse CD4, APC-Cy®7 mouse anti-CD8, all from BD Biosciences, USA; LIVE/DEAD Fixable Yellow Dead Cell Stain, Invitrogen, USA) and intracellular cytokines (PE anti-mouse IFN-γ, PE-Cy®7 anti-mouse TNF-α, APC anti-mouse IL-2, all from BD Biosciences, USA). The labeled cells were acquired with the BD FACSCanto II flow cytometer and analyzed with the program FlowJo v.10.6.2 (BD Biosciences).
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2

IFN-γ Production Analysis in Splenocytes

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To carry out IFN-γ production analysis, splenocytes were collected from mouse spleen and incubated with phorbol myristate acetate (PMA, 50 μg/mL) and ionomycin (50 μg/mL) for 5 h at 37 °C in T-cell culture medium (RPMI 1640 supplemented with 10% FBS and 1% penicillin-streptomycin). Next, the cells were washed in PBS buffer and stained with Alexa Fluor®−700 anti-mouse CD45 (catalog no. 103127, clone 30-F11), Brilliant Violet 421TM-anti-mouse CD3 (catalog no. 100228, clone 17A2), and FITC-anti-mouse CD8α (catalog no. 100705, clone 53-6.7) for 30 min on ice. All antibodies were obtained from Biolegend (San Diego, CA), and were diluted 1:200. Cells were then permeabilized using an intracellular fixation and permeabilization solution (fixation/permeabilization concentrate (catalog no. 00-5123-43; eBioscience) mixed with fixation/permeabilization diluent (catalog no. 00-5223-56; eBioscience) at 1:3 for 30 min at 4 °C. Finally, cells were stained with PE-anti-mouse IFN-γ (catalog no. 505808, clone XMG1.2) for 30 min on ice, washed in PBS buffer and analyzed using a BD LSRFortessaTM Flow Cytometer (BD Biosciences).
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3

Antigen-Specific T-cell Activation Assay

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Cultured T-cells (1× 106/ml) were restimulated with either DCs pulsed with peptides (5x104/well) (20:1) or whole-cell irradiated tumor digests (1× 106/well) (1:1). After 4 hrs of co-culture, monensin (0.7μl/ well) (BD Pharmingen) was added and co-culture continued for another 12 hours. Stimulated T-cells were FcR blocked and stained with FITC anti-CD4 (clone: GK1.5, BD Pharmingen) and APC anti-CD8 (clone: 53–6.7, eBioscience). Following fixation/permeabilization, cells were stained with PE anti-mouse IFN-γ (BD Pharmingen) and analyzed by flow cytometry on LSR Fortessa Flow Cytometer (BD Biosciences) using DIVA software. Antibody amounts used for staining were according to manufacturer’s specifications.
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4

Multiparametric Flow Cytometry Analysis

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APC anti-mouse CD8, APC anti-mouse CD4, APC anti-mouse CD3, PE anti-mouse IFN-γ, and PE anti-mouse PD-1 antibodies (Abs) were obtained from BD Biosciences (San Jose, CA). Intracellular cytokine staining (ICS) of IFN-γ was performed as previously described23 (link) using a Cytofix/Cytoperm Plus (with GolgiStop) kit from BD Biosciences. Foxp3 staining was performed using the Foxp3 staining buffer set from eBioscience (San Diego, CA). Appropriate isotype controls were used for the flow cytometric analysis. Flow cytometric data were collected using the BD FACSCalibur flow cytometer (BD Biosciences). Data were analyzed using the Cell Quest (BD Biosciences).
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5

Multiparametric Flow Cytometry for Evaluating Cytokine Responses

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Intracellular cytokine staining (ICS) was performed for TNFα and IFNγ. Peripheral blood cells (collected 7 days after each booster dose) and lung leukocytes (collected after the final booster dose) were stimulated overnight with 1 μg per peptide per well of Spike-derived overlapping peptides at 37°C, 5% CO2 in the presence of brefeldin A (Invitrogen, catalog no. 00-4506-15) and monensin (BioLegend, catalog no. 420701). Cells were stained with the following antibodies: PE anti-mouse IFNγ (BD, catalog no. 554412), fluorescein isothiocyanate anti-mouse TNFα (BD, catalog no. 554418), APC-Cy7 anti-mouse CD3 (BD, catalog no. 560590), PE-Cy7 anti-mouse CD4+ (Invitrogen, catalog no. 25-0041-82), and APC anti-mouse CD8a (eBioscience, catalog no. 17-0081-83). PMA (50 ng/ml) and ionomycin (1 μM) were used as positive controls, and complete medium only was used as the negative control. Cells were permeabilized and fixed (Invitrogen, catalog no. 00-5523-00). A LIVE/DEAD fixable (aqua) dead cell stain kit (Invitrogen, catalog no. L34966) was used to evaluate viability of the cells during flow cytometry. Sample acquisition was performed on FACSCanto II (BD) and data were analyzed with FlowJo V10 software (BD).
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6

Characterizing ZIKV-specific CD8+ T cells

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Flow cytometry analysis was performed to evaluate CD4+ and CD8+ T cell depletion and ZIKV-specific CD8+ T cell responses in the challenged mice (Guerrero et al., 1986 (link); Zhang et al., 2016 (link)). For analysis of CD4+ and CD8+ depletion in whole blood and splenocytes, peripheral blood cells and splenocytes were treated with 1 × Red Blood Cell Lysis Buffer (Biolegend), and stained with FITC-anti-mouse CD4 or PerCP-Cy5.5-anti-mouse CD8 antibody (BD Biosciences), followed by flow cytometry analysis using BD LSRFortessa 4 system. For analysis of ZIKV-specific CD8+ T cell responses, the above-treated splenocytes (2 × 106 cells/well) were incubated with ZIKV NS3 overlapping peptides (0.25 nM/peptide, final concentration 5 μg/ml) in the presence of 5 μg/ml brefeldin A (Biolegend), and cultured at 37°C for 5 h. After stimulation, the cells were washed with PBS and stained for surface marker using PerCP/Cy5.5 anti-mouse CD8a. After fixation and permeabilization, the cells were stained for intracellular markers using FITC-anti-mouse IL-2, PE-anti-mouse IFN-γ, and Brilliant Violet 421-anti-mouse TNF-α antibodies (BD Biosciences), followed by analysis using flow cytometry as described above.
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7

Characterizing ZIKV-specific CD8+ T cells

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Flow cytometry analysis was performed to evaluate CD4+ and CD8+ T cell depletion and ZIKV-specific CD8+ T cell responses in the challenged mice (Guerrero et al., 1986 (link); Zhang et al., 2016 (link)). For analysis of CD4+ and CD8+ depletion in whole blood and splenocytes, peripheral blood cells and splenocytes were treated with 1 × Red Blood Cell Lysis Buffer (Biolegend), and stained with FITC-anti-mouse CD4 or PerCP-Cy5.5-anti-mouse CD8 antibody (BD Biosciences), followed by flow cytometry analysis using BD LSRFortessa 4 system. For analysis of ZIKV-specific CD8+ T cell responses, the above-treated splenocytes (2 × 106 cells/well) were incubated with ZIKV NS3 overlapping peptides (0.25 nM/peptide, final concentration 5 μg/ml) in the presence of 5 μg/ml brefeldin A (Biolegend), and cultured at 37°C for 5 h. After stimulation, the cells were washed with PBS and stained for surface marker using PerCP/Cy5.5 anti-mouse CD8a. After fixation and permeabilization, the cells were stained for intracellular markers using FITC-anti-mouse IL-2, PE-anti-mouse IFN-γ, and Brilliant Violet 421-anti-mouse TNF-α antibodies (BD Biosciences), followed by analysis using flow cytometry as described above.
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8

Cytokine-Induced IFN-γ Response in Murine T Cells

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Purified naïve T cells were cultured in 96-well plates (2 x 105/well) alone or stimulated with recombinant murine IL-12 (500pg/ml: PeproTech) and/or IL-18 (5pg/ml – 1000pg/ml; R&D systems) for 24h at 37°C. IFN-γ levels in the supernatants of triplicate cultures were determined using a sandwich ELISA kit (R&D Systems). For intracellular IFN-γ response, cells were pre-stimulated as described above for 16–20h before addition of 10μg/ml brefeldin A solution (Sigma-Aldrich) and further incubated for 4h (intracellular protein accumulation period). For PMA plus ionomycin stimulation condition, brefeldin A solution and PMA (0.05μg/ml final) plus ionomycin (0.75 μg/ml final) were added simultaneously and T cells incubated for 4h. Cells from triplicate wells were pooled, washed and stained with LIVE/DEAD® Fixable Aqua Dead Cell dye (Life Technologies) for 30 min at 4°C. Subsequently cells were surface stained with fluorochrome-conjugated anti-mouse CD3ε, CD4, CD8α and Vβ6/8.1–2 for 30 min at 4°C then were treated with Cytofix/Cytoperm (BD Biosciences) and stained with anti-mouse IFN-γ-PE (BD Pharmingen). Data were acquired on BD LSR II flow cytometer and analyzed using FlowJo analysis software.
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9

Splenocyte Stimulation Assay for IFN-γ

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2x106 splenocytes were stimulated with BEI-inactivated BTV-8 or the appropriate negative controls for 5h at 37°C 5% CO2 in 96-well plates, in presence of 1 μg/ml of Brefeldin-A (Sigma-Aldrich). Cells were harvested and stained with anti-mouse CD4-FITC and anti-mouse CD8-PerCP antibodies (BD Pharmingen). After washing and permeabilisation with PBS containing 0.1% saponin, cells were stained with anti-mouse IFN-γ-PE (BD pharmingen). The cells were acquired on a BD FACSCalibur flow cytometer (Becton Dickinson and Co., Franklin Lakes, New Jersey, USA) and analysed with FlowJo (Tree Star Inc., San Francisco, California, USA).
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10

Characterizing Autoimmune Neuroinflammation

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Myelin oligodendrocyte glycoprotein 35–55 (MOG35–55) peptide (MEVGWYRSPFSRVVHLYRNGK) and myelin basic protein (MBP) Ac1–11 peptide (Ac-ASQKRPSQRSK) were generated by the Protein Core Laboratory of the Blood Research Institute, BloodCenter of Wisconsin. KYC was synthesized by Biomatik (Wilmington, DE). The 2.4G2 hybridoma was obtained from the American Tissue Culture Collection. Anti-mouse CD4-APC-eFluor 780 CD11b-PE, CD11b-biotin, IL-17-Alexa Fluor 647, Foxp3-PE and streptavidin-PE Cy5.5 were purchased from eBioscience (San Diego, CA). Anti-mouse IFN-γ-PE was purchased from BD Biosciences (San Diego, CA). Anti-mouse Ly-6C-APC and Ly-6G-APC-Cy7 were purchased from Biolegend (San Diego, CA). The SMI-32 antibody, which detects nonphosphorylated neurofilament-H was purchased from Covance (Emeryville, CA). Streptavidin Alexa 405 and goat anti-mouse Alex 456 (H + L) were purchased from Life Sciences Advanced Technologies (St. Petersburg, FL). Anti-MPO heavy chain was purchased from Santa Cruz Biotechnology, Inc. (Dallas, TX). Anti-rabbit IgG (H + L)-HRP was purchased from Jackson ImmunoResearch (West Grove, PA). Anti-β-actin-HRP was purchased from Sigma-Aldrich (St. Louis, MO). For all experiments, the mice were age (6–8 wk) and gender matched with both sexes being utilized.
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