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12 protocols using enhanced chemiluminescence reagent

1

Membrane Protein Extraction and Western Blot Analysis

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After recovery of the frozen tissue samples, protein was extracted using the natural membrane protein extraction kit ProteoExtract (M-PEK) (MERCK Co., Kenilworth, NJ, USA), and the protein concentration was determined using a Bio-Rad protein assay kit (Hercules, CA, USA) according to manufacturer’s instructions. Subsequently, 40 μg of protein was loaded on an 8% SDS–polyacrylamide gel (stacking gel 100 V, resolving gel 200 V) for 1 h at an electrode constant current of 300 mA. The proteins in the gel were transferred onto a nitrocellulose membrane (Kexing Co., Beijing, China), blocked for 1 h at 37 °C in 5% skim milk powder, and incubated overnight at 4 °C with sheep anti-rat TGFβ1 (ab208466; Abcam, Cambridge, UK) and Smad7 (66,478; Proteintech, Wuhan,China) antibodies [25 (link)]. Horseradish peroxidase-labeled rabbit anti-sheep secondary antibody was added (1:400; Nakasugi Jinqiao Co., Beijing, China) and incubated at 37 °C for 1 h. The signal was detected using the enhanced chemiluminescence reagent (Abcam). Positive bands were analyzed using Gel-Pro 4.0 gel optical density analysis software, and the cumulative optical density (IOD value) was measured, with the R value representing the relative protein content as follows: R = reference IOD value of PLSCR (target)/reference IOD value of GAPDH (reference protein).
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2

Autophagy Protein Expression Analysis

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Western blot analysis was performed to measure the expression of beclin-1 and LC3-II/I, proteins associated with autophagy (25 (link)). HK-2 cells were lysed using RIPA lysis buffer (Teknova, Inc.) at 4°C for 10–15 min. Protein concentration was determined using bicinchoninic acid assay method. Equal amounts of 50 µg protein extract were separated by 10% SDS-PAGE and transferred onto polyvinylidene fluoride membranes. The membranes were blocked with 5% nonfat milk diluted in Tris-buffered saline containing 0.1% Tween-20 at room temperature for 90 min. The membranes were then immunoblotted for Beclin1 (1:1,000; cat. no. ab55878; Abcam), LC3 (1:1,000; cat. no. ab48394; Abcam), and β-actin (1:1,000; cat. no. ab3280; Abcam) at 20–27°C for 2 h before incubation with secondary antibodies conjugated to horseradish peroxidase-conjugated goat anti-rabbit Immunoglobulin G (1:5,000, cat. no. ab7074; Abcam) at 37°C for 20 min and visualized with enhanced chemiluminescence reagent (Vazyme). Immunoreactive bands were analyzed using Image Pro Plus 6.0 software (Media Cybernetics, Inc.).
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3

Protein Expression Analysis by Western Blot

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Cells were lysed using RIPA lysis buffer (50 mM Tris-HCl pH 7.4, 1 mM EDTA, 0.25% deoxycholic acid disodium salt, 1% NP40, 150 mM NaCl and 0.1% SDS). After sonication, cells were centrifuged at 12,000 × g for 15 min at 4°C. Protein concentration was determined using a BCA assay. Then, 30 µg of cell extracts were subjected to 10–12% SDS-PAGE electrophoresis and transferred to PVDF membranes. Following protein transfer, the membranes were blocked with 5% milk and then incubated with specific primary antibodies (1:1,000) at 4°C overnight followed by a horseradish peroxidase-conjugated secondary antibody (1:5,000; cat. nos. ab6721 and ab6728; Abcam) at room temperature for 2 h. Protein bands were visualized using an enhanced chemiluminescence reagent (cat. no. 32106; Thermo Fisher Scientific, Inc.).
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4

Protein Extraction and Western Blot Analysis

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After the extraction of proteins from serums and cells via radioimmunoprecipitation assay (RIPA) lysis solution (Beyotime, Shanghai, China), 60 μg quantified proteins were isolated on 10% sodium dodecyl sulfate–polyacrylamide gel for 2 h, followed by the transferring of proteins onto the polyvinylidene fluoride membranes (Beyotime). Then, 5% skim milk (Beyotime) was applied for blocking membranes for 3 h, which were incubated with primary antibodies from Abcam (Cambridge, United Kingdom): anti-Hexokinase 2 (anti-HK2; ab209847, 1:1000), anti-Glucose Transporter 1 (anti-GLUT1; ab115730, 1:1000), anti-SOX13 (ab198921, 1:1000) and anti-GAPDH (ab9485, 1:3000) overnight at 4 °C Following the incubation of secondary antibody (Abcam, ab205718, 1:5000) for 1 h, the immunoreactive signals were assayed through enhanced chemiluminescence reagent (Abcam), and the gray levels were analyzed via the Image J software (NIH, Bethesda, MD, USA).
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5

Quantitative Protein Analysis of MDA-MB-231 Cells

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Total protein was extracted from 1×106 MDA-MB-231 cells using RIPA lysis buffer (Elabscience, cat. No. E-BC-R327) and quantified using a Pierce™ BCA Protein Assay Kit (Pierce; Thermo Fisher Scientific, Inc.). Following denaturation, electrophoresis of 30 µg protein/lane was performed using 12% SDS-PAGE. Following gel transfer onto PVDF membranes, the membranes were blocked in 5% fat-free milk for 2 h at room temperature. Subsequently, the membranes were incubated overnight at 4°C with the following primary antibodies: Anti-MMP2 (1:1,000; cat. no. ab215986; Abcam), anti-MMP9 (1:1,000; cat. no. ab219372; Abcam), anti-GAPDH (1:1,000; cat. no. ab181602; Abcam), anti-Ki67 (1:1,000; cat. no. ab92742; Abcam), anti-proliferating cell nuclear antigen (PCNA; 1:1,000; cat. no. ab92552; Abcam), anti-CDCA5 (1:1,000; cat. no. ab192237; Abcam) and anti-PDS5A (1:500; cat. no. 203627-T34; Sino Biological Inc.). Next, the membranes were incubated with a goat anti-rabbit HRP-conjugated IgG secondary antibody (1:2,000; cat. no. ab6721; Abcam) at room temperature for 4 h. The protein bands were visualized using an enhanced chemiluminescence reagent (cat. no. abs920, Absin). The protein expression levels were semi-quantified using ImageJ software (v1.46; National Institutes of Health) with GAPDH as the loading control.
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6

Protein Extraction and Western Blot Analysis

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Protein was extracted using a natural membrane protein extraction kit ProteoExtract (Chemical Book Co., Beijing, China), and the protein concentration was determined using a Bio-Rad protein assay kit (Noble-Ryder Co., Beijing, China). Subsequently, 40 μg of protein was loaded on an 8% SDS–polyacrylamide gel (stacking gel 100 V, resolving gel 200 V) for 1 h at a constant current of 300 mA. Proteins in the gel were transferred onto a nitrocellulose membrane (Kexing Co., Shenzhen, China) and blocked with 5% skim milk for 1 h at 37 °C and incubated overnight at 4 °C with sheep anti-rat PLSCR monoclonal antibody (1:200, PAB781Hu01; Abcam, Guangzhou, China). Horseradish peroxidase-labeled rabbit anti-sheep secondary antibody was then added (1:400) and the mixture was incubated at 37 °C for 1 h. After washing the membrane, the signal was detected with enhanced chemiluminescence reagent (Abcam, Guangzhou, China). Positive bands were analyzed using Gel-Pro 4.0 gel optical density analysis software, and the IOD value was measured, with the R value representing the relative protein content as described above.
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7

Western Blot Analysis of Apoptosis-Related Proteins

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Following the obtaining of proteins by Radio-Immunoprecipitation Assay (RIPA) lysis and extraction buffer (Thermo Fisher Scientific, Waltham, MA, USA), 40 μg proteins were split on 10% sodium dodecyl sulfate–polyacrylamide gel (Invitrogen) for 2 h. 5% skim milk (Thermo Fisher Scientific) was implemented to block the non-specific binding signals after the transferring of proteins onto the polyvinylidene fluoride membranes (Thermo Fisher Scientific). Then membranes were incubated with primary antibodies: anti-CREBRF (Abcam, Cambridge, UK, ab26262, 1:1000), anti-poly-ADP-ribose polymerase (anti-PARP; Abcam, ab74290, 1:1000), anti-Cleaved PARP (Abcam, ab30264, 1:1000), anti-Cleaved caspase-3 (Abcam, ab2302, 1:1000) and anti-β-actin (Abcam, ab8227, 1:3000) for 3 h at room temperature. Subsequently, the secondary antibody (Abcam, ab205718, 1:5000) was exploited to bind to primary antibodies. 1 h later, the detection of combined signals was administered by the enhanced chemiluminescence reagent (Abcam). Ultimately, ImageLab software version 4.1 (Bio-Rad Laboratories, Hercules, CA, USA) was used for image acquisition and densitometric analysis previously [22 (link)].
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8

Protein Extraction and Western Blot Analysis

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For extraction of protein, RIPA lysis buffer (Keygen) was used to lyse cells or tissues. After measuring the protein concentration using a BCA protein assay kit (Abcam), electrophoresis was performed with SDS‐PAGE to separate the protein. Next, the protein was transferred onto PVDF membranes (Invitrogen), followed by blocking in nonfat milk (5%; Beyotime). After that, the membranes were probed with primary antibodies (overnight, 4°C). The primary antibodies containing Cyclin D1 (1:1000, ab226977), MMP9 (1:2000, ab76003), PDL1 (1:1000, ab205921) and GAPDH (1:2000, ab9485) were all provided by Abcam. After incubation with secondary antibody (1:3000, ab205718, Abcam), enhanced chemiluminescence reagent (Abcam) was used to visualize the blot signal.
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9

Protein Extraction and Western Blot Analysis

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A Whole Cell Extraction Kit (cat. no. OP-0003; Epigentek Group, Inc.) was used to extract total protein from the osteosarcoma cells. Protein concentration was determined using a BCA Protein Quantification Kit (cat. no. E112-01; Vazyme Biotech Co., Ltd.). Subsequently, 45 µg proteins were separated by 10% SDS-PAGE and were transferred onto PVDF membranes. Membranes were blocked using 5% skimmed milk at room temperature for 1 h and incubated with the primary antibodies (diluted with 5% skimmed milk) against E-cadherin (cat. no. ab15148; 1:1,000; Abcam), N-cadherin (cat. no. ab18203; 1:1,000; Abcam), and matrix metalloproteinase-9 (MMP-9) antibody (cat. no. ab38898; 1:2,000; Abcam) and β-actin (cat. no. sc-69879; 1:3,000; Santacruze) overnight at 4°C Membranes were then incubated with goat anti-mouse IgG H&L (HRP) (cat. no. ab6789; 1:2,000; Abcam) or goat anti-rabbit IgG H&L (HRP) (cat. no. ab6721; 1:2,000; Abcam) at room temperature for 2 h. Enhanced chemiluminescence reagent (cat. no. WBKLS0100; Beijing Xinjingke Biotechnologies Co., Ltd.) was used to detect the signal on the membrane. ImageJ software (v1.8.0; NIH) was used to quantify the gray value of protein bands.
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10

Immunoprecipitation and Western Blot Analysis

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Confluent 60 mM plates of approximately 1 million neonatal myocytes were washed twice with PBS and lysed with 1 ml HSE buffer (20 mmol/L HEPES, pH 7.4, 150 mmol/L NaCl, 5 mmol/L EDTA, 1% Triton X-100) supplemented with protease inhibitors (AEBSF, benzamidine, leupeptin/pepstatin) and okadaic acid (500 nmol/L). Following centrifugation at 13.2 krpm at 4 °C, soluble lysates were incubated with 5 μL mAKAP or nesprin antibodies in the presence of 25 μLTrueBlot Anti-Rabbit Ig agarose Beads (Rockland) overnight at 4 °C. Beads were pelleted and washed three times with HSE buffer and boiled in 25 μL 2× SDS loading buffer. Samples were size-fractionated by 5% (for RyR2) or 7.5% SDS-PAGE and transferred to nitrocellulose membranes. Blots were blocked in 5% milk for one hour, followed by incubation in primary antibody overnight at 4 °C. Following washes, membranes were incubated with secondary antibodies (Rabbit Trueblot Anti-Rabbit IgG HRP, Rockland, 1:5000) for one hour. Signals were visualized with an enhanced chemiluminescence reagent (Abcam) and exposed to X-ray film. Quantification was determined by ImageJ analysis.
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