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Alexa 546 red

Manufactured by Thermo Fisher Scientific

Alexa-546 (red) is a fluorescent dye used in a variety of biological applications. It has an absorption maximum at 556 nm and an emission maximum at 573 nm, making it suitable for detection in the red spectrum.

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2 protocols using alexa 546 red

1

Cellular Localization of ERα and NHERF2

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The cellular location of ERα and NHERF2 was determined by indirect immunofluorescence. Briefly, HepG2 cells were grown on glass coverslips and fixed with freshly prepared 3% paraformaldehyde solution. The cells were incubated first with primary antibodies and then with secondary antibodies conjugated with Alexa-546 (red) and Alexa-488 (green; both from Molecular Probes, Eugene, OR). Prolong-Gold Antifade reagent with DAPI (blue; Invitrogen) was used to counterstain the DNA. Confocal scanning analysis was done using an MRC600 laser-scanning confocal microscope (Bio-Rad, Hercules, CA). Each slide was examined for each stain at three excitation wavelengths (488, 546 and 633 nm).
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2

Imaging-based Quantification of Nuclear ERα in MCF-7 Cells

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The cellular localization of ERα and ISG12 was determined by indirect immunofluorescence microscopy. Briefly, MCF-7 cells were grown on glass coverslips and fixed with freshly prepared 2% paraformaldehyde solution. The cells were incubated first with primary antibodies and then with secondary antibodies conjugated with Alexa-546 (red) and Alexa-488 (green; both from Molecular Probes, Eugene, OR). Prolong-Gold Antifade reagent with DAPI (blue; Invitrogen) was used to counterstain the DNA. Confocal analyses were performed using the Leica TCS SP8 confocal microscopy system and MRC600 laser-scanning confocal microscope (Bio-Rad, Hercules, CA). Each slide was examined at three excitation wavelengths (488, 546 and 633 nm). Quantification of nuclear ERα immunofluorescent signal (ERα signal/area) in control MCF-7 and MCF7-ISG12 cells is represented as mean ± SE. of three independent experiments (25–120 nuclei, each). Statistical significance (p value) for differences between MCF-7 and MCF7-ISG12 cells is shown as p < 0.05.
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