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5 protocols using actin 60008 1 ig

1

Investigating JNK-BAD Signaling Pathway

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Roswell Park Memorial Institute 1640 (RPMI-1640) and high glucose Dulbecco’s modified Eagle’s (DMEM) medium were purchased from Hyclone (South Logan, UT, USA). Fetal bovine serum (FBS) was purchased from Gibco (CA, USA). JNK agonist anisomycin was purchased from Tocris biosciences (Bristol, UK). Anti- SH3BP5 (#11127-2-AP), Caspase 3 (#19677-1-AP), JNK (#24164-1-AP), BAD (#10435-1-AP), and Actin (#60008-1-Ig) antibodies were purchased from Proteintech Group (Chicago, IL, USA). Anti- p-JNK Thr183/Tyr185 (#9255) and p-BAD Ser112 (#5284) antibodies were purchased from Cell Signaling Technology (Beverly, MA, USA).
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2

Quantitative Western Blot Analysis

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The cell lysates were incubated in SDS-PAGE loading buffer for 5 min at 100 °C as before (87 (link), 89 (link)). The samples were separated on 4–10% SDS-PAGE gel, transferred, probed with GFP (sc-9996), CCT8 (sc-13891), CDK5 (sc-173), p35 (sc-820), ac-tubulin (6–11B-1) (Santa Cruz Biotechnology), AT8 (MN1020), α-tubulin (DM1A) (62204) (Invitrogen), pT231 (55313), pT181 (54960) (ANASPEC), pS199 (A00894), tau (A01387), Avi (A00674), His (A00174) (GenScript), mCherry (GTX59788) (GeneTex), CCT2 (WH0010576M1) (Sigma), actin (60008–1-Ig) (Proteintech), CCT4 (EPR8495), CCT5 (EPR7562) (Epitomics), GSK3β (12456), pGSK3β(Ser9) (9323) (Cell Signaling), pGSK3β(Tyr216) (13A) (BD), HA.11 (901501) (Biolegend), PHF-1 (a kind gift of Dr. P. Davies, Albert Einstein University, Bronx, NY) antibodies and visualized with Clarity Western ECL Substrate (Bio-Rad). The intensity of specific bands was analyzed using the Image Lab 5.0 software (Bio-Rad). All experiments were repeated at least three times.
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3

Protein Expression Analysis by Western Blot

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Cell lysates were subjected to SDS-PAGE (10% separation gel) and transferred to a polyvinylidene difluoride (PVDF) membrane. Primary antibodies against the following proteins were used: PPARγ (16643-1-AP; Proteintech), TGFBI (10188-1-AP; Proteintech), and actin (60008-1-Ig; Proteintech). Horseradish peroxidase-conjugated secondary antibodies were used (ZSGB-BIO). Signals were detected using an ECL (enhanced chemiluminescence) kit (Millipore).
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4

Western Blot Analysis of Hedgehog Signaling

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Total proteins were extracted by sonication in RIPA (Radioimmunoprecipitation assay buffer) buffer containing protease and phosphatase inhibitors, and the protein concentration was measured using the BCA (Bicinchonic Acid) kit (Thermo Fisher Scientific, Waltham, MA, USA); 40 μg of protein was loaded on 7% PAA (Polyacrylamide) gel. After electrophoresis, they were transferred to a nitrocellulose membrane (Amersham BioSciences, Little Chalfont, England, UK), blocked with 5% milk and incubated with primary antibodies overnight. Antibodies used for detection were as follows: rabbit anti-GLI1 (Cell Signaling Technology, V812, 1:200, Danvers, MA, USA), mouse anti-GLI2 (Santa Cruz Biotechnology, sc-271786, 1:200, Dallas, TX, USA), rabbit anti-GLI3 (GeneTex GTX104362, 1:1000, Irvine, CA, USA). Actin (60008-1-Ig, ProteinTech, 1:4000, Rosemont, IL, USA) was used as a loading control. After washing in TBST (Tris-Buffered Saline, 0.1% Tween® 20 Detergent), secondary antibodies HRP (Horseradish Peroxidase)-conjugated anti-rabbit (BD Pharmingen, 554021, 1:6000, San Jose, CA, USA) and anti-mouse (BD Pharmingen, 554002, 1:8000, San Jose, CA, USA) were applied for 1h at room temperature, washed, and visualized using SuperWest Signal Pico and Femto reagents (Thermo Fisher Scientific, Waltham, MA, USA) on Uvitec Image Alliance 4.7 instrument (UVItec, Cambridge, England, UK).
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5

Western Blot Analysis of Key Proteins

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The whole cell lysates were harvested and subjected to SDS-PAGE (10% separation gel) and transferred to a polyvinylidene difluoride (PVDF) membrane. Primary antibodies against the following proteins were used: HMGB1 (10829-1-AP; Proteintech), TGFBI (10188-1-AP; Proteintech), GAPDH (10494-1-AP; Proteintech), and actin (60008-1-Ig; Proteintech). Horseradish peroxidase–conjugated secondary antibodies were used (ZSGB-BIO). Signals were detected using an ECL (enhanced chemiluminescence) kit (Millipore).
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