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2 protocols using mre11 12d7 ab214

1

Protein Extraction and Analysis Protocol

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mRNA was extracted using TRIzol reagent (Invitrogen Corporation) and quantitative reverse transcription-PCR was performed as described.54 (link) Primer sequences are given as Supplementary materials. Total protein extraction and western blot protocol have been previously described.54 (link) Chromatin fractionation was performed as described.57 (link) Primary antibodies were as follows: MYCN (B8.4.B), SC53993, p53 (DO-1) SC-126, CHK1 (G4), SC8408, Tubulin, (TU-02), SC-8035, and β-Actin (I-19) SC-1616 Santa Cruz Biotechnology; phospho-CHK1 (S317), DR1025, Calbiochem (San Diego, CA, USA); RAD50 (13B3/2C6), ab89, Mre11 (12D7) ab214, ZIC1 ab72694, Histone H3, ab1791, phospho-ATM (Ser 1981), ab81292, Rad50, ab499, and Mre11, ab6511, Abcam (Cambridge, UK); NBS1 (1C3) GTX70222, Gene Tex (Irvine, CA, USA); p53 (1C12), #2524, phospho-p53 (Ser 15), #9284, and phospho- histone H2AX (ser 139), #2577, Cell Signaling Technology (Danvers, MA, USA); PARP p85 fragment, #G7341, Promega Corporation; RPA32, A300-244 A, phospho-RPA32 S4/S8, A300-245 A, Bethyl Laboratories (Montgomery, TX, USA); Nbs1 (Y112), NB110-57272, Novus Biologicals; Immunoreactive bands were visualized by enhanced chemoluminescence (Advansta Inc., Menlo Park, CA, USA).
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2

Protein Extraction and Western Blot

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Total protein extraction and western blot protocols have been previously described56 (link). Immunoreactive bands were visualized by enhanced chemoluminescence (Advansta Inc., Menlo Park, CA, USA). Antibodies were as follows: MRE11 (12D7) ab214 (Abcam, Cambridge, UK); PARP 85 fragment #G7341 (Promega Corporation, Medison, WI, USA); Caspase-3 #9662, phospho-histone H2AX (ser 139) #2577 and phospho-p53 (Ser 15) #9284 (Cell Signaling Technology, Danvers, MA), USA; p53 (DO-1) #SC-126 and β-actin (I–19) #SC-1616 (Santa Cruz Biotechnology, INC, Dallas, TX, USA).
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