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48 protocols using ab92946

1

Hepatocyte Protein Expression Analysis

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The homogenate from the liver tissue was collected, and the lysate was used to lyse the hepatocytes for 30 min on ice. The BCA method was used to determine the protein concentration. The sample was added to 5× loading buffer by volume and heated in a water bath at 100 °C for 5 min. The hepatocytes were sonicated by SJIALAB for 2 min (10% ultrasound intensity) and centrifuged for 10 min to obtain the supernatant. The extracted protein was subjected to polyacrylamide gel electrophoresis (80–120 V), transferred to a PVDF membrane, sealed and incubated overnight at 4 °C with the addition of primary antibody of nNOS (3G6B10, Invitrogen, Thermo Fisher Scientific, Waltham, MA, USA), eNOS (9D10, Invitrogen), iNOS (PA1036, Invitrogen), NF-κB (PA1186, Invitrogen), IκB-α (397700, Invitrogen), Mn-SOD (PA530604, Invitrogen), Cu/Zn-SOD (PA5270240, Invitrogen), CAT (PA259183, Invitrogen), HO-1 (ab68477, Abcam, Cambridge, MA, USA), Nrf2 (ab92946, Abcam), γ-GCS (sc-390811, Santa Cruz Biotechnology, Dallas, TX, USA), NQO1 (ab28947, Abcam) and β-action (MA5157739, Invitrogen). The protein was incubated overnight at 37 °C with the addition of a second antibody (A21241) for 2 h, and color detection and chemiluminescence imaging analysis system (Tanon 6200, ShanghaiTanon Technology Co., Ltd., Shanghai, China) were used to collect images [56 (link)].
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2

Quantification of Protein Levels in Cerebral Cortex

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Western blot analyses were performed as previously described31 (link). Briefly, cerebral cortex samples were collected, homogenized, and extracted in RIPA lysis buffer containing a 1% (v/v) protease and phosphatase inhibitor cocktail. The protein samples were separated by SDS–PAGE and transferred to PVDF. After blocking with 5% (w/v) nonfat milk, the membranes were incubated with the following primary antibodies overnight at 4°C: rabbit anti-β-actin (1:1,000, rabbit polyclonal, Abcam, ab8227), rabbit ZO-1 (1:1,000, rabbit polyclonal, Abcam, ab 96587), phospho-p38 (CST, #4551, 1:2,000), and rabbit anti-Nrf2 (1:1,000, rabbit polyclonal, Abcam, ab92946). Afterwards, the membranes were incubated with HRP-conjugated goat anti-rabbit IgG or goat anti-mouse IgG secondary antibodies (1:5,000) for 1 h at room temperature and then scanned with a Bio-Rad (California, United States of America) gel imaging system.
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3

Quantification of Nrf2 and β-TrCP Proteins

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Total protein and nucleoprotein (for Nrf2 and β-TrCP) in the ipsilateral peri-infarct hemisphere were extracted, and the protein concentration was determined by bicinchoninic acid protein (BCA) assay. The protein samples were then denatured by boiling for 10 min. Then, 20 μg of each protein sample was separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) at a constant voltage of 80 V for 100 min. After transfer to polyvinylidene fluoride (PVDF) membrane, the separated protein bands were incubated with individual primary antibodies (caspase-3 1:500, ab197202, Abcam; AKT, 1:1000, Cat# 9272, CST; p-AKT, 1:1000, Cat#9271, CST; GSK-3β, 1:1000, Cat# 9315, CST; p-GSK-3β, 1:1000, Cat# 9336, CST; β-TrCP, 1:1000, Cat# 4394, CST; Nrf2 1:1000, ab92946, Abcam; PCNA, 1:1000, ab92552, Abcam; HO-1, 1:2000, ab52947, Abcam; NQO1, 1:10000, ab80588, Abcam) at 4 °C overnight, followed by incubation with corresponding secondary antibodies at room temperature for 2 h. The developed bands were observed under a gel imaging system.
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4

Protein Expression in Dissociated Liver Tissues

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Following liver tissues were routinely dissociated and digested by collagenase type II, the hepatic cells suspensions were collected for extracting total proteins by Total Protein Extraction Kit (Shanghai Sangon Biotech, China) according to the manufacturer’s instructions, then the concentration of proteins was determined using the Bradford reagent (Sigma-Aldrich, USA). The expressions of OX40, Nrf2, NQO1, and inflammatory signaling NOD-like receptor family pyrin domain-containing 3 (NLRP3) were evaluated by the standard steps of Western-blotting (WB) experiment. The primary antibodies were provided as the followings: Anti-CD134/OX40L receptor antibody (ab229021, 1:800, Abcam), anti-Nrf2 antibody (ab92946, 1:1000, Abcam), anti-NQO1 antibody (sc-32,793, 1:800, Santa Cruz Biotechnology), or anti-NLRP3 antibody (ab263899, 1:1000, Abcam). Anti-rabbit IgG-HRP antibody (LS-C86382, LSBio) was used as the secondary antibody. WB results were pictured by enhanced chemiluminescence reagent (Beyotime, China), and then the integrated absorbance (IA) of the bands were analyzed quantitatively using LI-COR Odyssey Imaging System. Anti-GAPDH Rabbit Polyclonal antibody (BM1623, Dingguo Biotech Co. Ltd) were used as an internal control for normalizing the values in equal samples, the relative levels of target proteins were evaluated by the ratio of target protein vs internal control (IA/IA).
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5

Proteomic Analysis of Ovarian Tissues

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Ovarian tissues were homogenized in RIPA buffer (Thermo Scientific, Rockford, IL, USA) and centrifuged at 12,000 × g for 20 min. The protein content of samples was determined using a BCA protein assay kit (Bio-Rad Laboratories, Carlsbad, CA). Aliquots of each sample were separated via 12% SDS-PAGE and then transferred onto a nitrocellulose membrane, which was blocked with non-fat milk for 1 h. The membranes were probed overnight at 4°C with antibodies against the following proteins: HO-1 (ab68477; 1:2000; Abcam); NRF2 (ab92946; 1:3000; Abcam), TNF-α (SAB5700627; 1:1000; Sigma), IL-1β (AB1413-I; 1:4000; Sigma), IL-6 (SAB5700632; 1:2000; Sigma); MVH (ab13840; 1:3000; Abcam); OCT4 (ab184665; 1:2000; Abcam); Ki67 (ab16667; 1:4000; Abcam), PCNA (mAb2586; 1:3000; Cell Signaling Technology), ATM (ab199726; 1:2000; Abcam), RAD51 (ab176458; 1:3000; Abcam), and GAPDH (ab181602; 1:3000; Abcam). After washing with PBST buffer solution three times, the membranes were incubated with appropriate horseradish peroxidase-conjugated secondary antibodies (Beyotime Institute of Biotechnology) for 1 h at 25 °C, and the protein bands were visualized using an enhanced chemiluminescence kit (Thermo Fisher Scientific Inc.). The blots were scanned and normalized to GAPDH for quantification.
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6

Protein Expression Analysis in Rat Pancreas

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The pancreatic tissues of rats were collected, washed, and homogenized in radioimmunoprecipitation assay lysis buffer. Methods for quantification of whole protein content and western blot have been described previously (17 (link)). The primary antibodies used for western blotting were as follows: Anti-JUN (ab31419, Abcam), anti-NFE2L2 (ab92946, Abcam), anti-ATG5 (D5F5U, Cell Signaling Technology), anti-KRAS (#F234-sc30, Santa Cruz Biotechnology), and anti-HSPA5 (ab21685, Abcam). The intensity of the bands was analyzed using the SpotDenso tool of the built -in software of the detection instrument (Alphaimager 2200, ProteinSimple).
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7

Protein Expression Analysis of Oxidative Stress

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The protein extracts prepared after sample collection were detected by WB. The oxidative stress–associated protein nuclear factor–erythroid 2-related factor-2 (Nrf-2; ab92946, Abcam), lipid peroxidation–associated protein malondialdehyde (MDA; ab27642, Abcam), mitochondrial injury–associated protein cytochrome c oxidase IV (COXIV; ab202554, Abcam), heat shock protein 60 (HSP60; ab190828, Abcam), system Xc–associated protein solute carrier family 7, member 11 (SLC7A11; ab175186, Abcam), glutathione peroxidase-4 (GPX4; ET1706-45, HUABIO), ferroptosis-associated protein ferroportin-1 (FPN1; ab239511, Abcam), and divalent metal transporter 1 (DMT1; ab157208, Abcam) were used, with β-actin (AF7018, Affinity, England) as the control. Goat anti-rabbit IgG (Biosharp, China) was used as the secondary antibody. A western blotting ECL kit (ZETA-Life, San Francisco, CA, USA) was used. After the detection step, protein bands were observed and photographed using an automated chemiluminescence image analysis system (Tanon, Shanghai, China), and various parameters were quantified using ImageJ software (National Institutes of Health, DC, USA). The procedure was repeated three times before statistical analysis using SPSS 26.0.
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8

Western Blot Analysis of Protein Markers

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The proteins were collected using RIPA lysis buffer (Sigma-Aldrich) containing protease inhibitor. Cell lysates were resolved by sodium dodecyl sulfate–polyacrylamide gel electrophoresis and then transferred onto polyvinylidene fluoride membranes (PVDF). After blocking with 5% skimmed milk, the membranes were incubated overnight with primary antibodies against SM22α (ab14106, 1 μg/ml; Abcam), αSMA (ab7817, 0.341 μg/ml; Abcam), α2AR (ab85570, 1 μg/ml; Abcam), p-GSK-3β (ab107166, 1 μg/ml; Abcam), GSK-3β (ab93926, 1:1000; Abcam), MKP-1 (ab138265, 1:1000; Abcam), NRF2 (ab92946, 1:1000; Abcam) and GAPDH (ab8245, 1:1000; Abcam) at 4℃. Then the membranes were washed three times. After that, the membranes were incubated with secondary antibodies for 2 h at room temperature. After being probed with enhanced chemiluminescence (Yeasen Biotechnology), the proteins were visualized using an image analysis system (Tanon, Shanghai, China). The protein intensity was evaluated by ImageJ software.
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9

Western Blot Analysis of Cell Signaling Proteins

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Protein samples from LECs of each group were added to SDS-PAGE and blotted onto PVDF membrane. Primary antibodies against p21 (ab109199; Abcam, 1 : 1000), CDKN2A/p16INK4α (ab211542; Abcam, 1 : 1000), Cyclin D1 (ab16663; Abcam, 1 : 1000), CDK4 (ab199728; Abcam, 1 : 1000), phosphorylated-ERK1/2 (ab201015; Abcam, 1 : 1000), ERK1/2 (ab184699; Abcam, 1 : 1000), BVRA (sc-393385; Santa Cruz, 1 : 1000), ERK2 (ab32081; Abcam, 1 : 1000), Nrf2 (ab92946; Abcam, 1 : 1000), HO-1 (ab68477; Abcam, 1 : 1000), GAPDH (ab8245; Abcam, 1 : 5000), and Histone H3 (ab1791; Abcam, 1 : 5000) were incubated with blots at 4°C overnight, followed by incubation with goat anti-mouse IgG H&L (ab150113; Abcam, 1 : 5000) or goat anti-rabbit IgG H&L (ab150077; Abcam, 1 : 5000) for 1 h at room temperature. GAPDH and Histone H3 were used as the quantitative loading control.
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10

Western Blot Analysis of Myocardial Proteins

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Total proteins were extracted from the left ventricles of murine hearts or cultured cells using the RIPA lysis buffer as previously described.31, 32 Next, 20 μg total proteins were separated by 10% SDS‐PAGE, transferred onto PVDF membranes, blocked with 5% skim milk at room temperature and incubated with indicating primary antibodies at 4°C overnight. On the second day, the membranes were probed with horse radish peroxidase (HRP)‐conjugated secondary antibodies and visualized with an electrochemiluminescence reagent. The bands were analysed using an Image Lab software and normalized to GAPDH. The following antibodies were used at a 1:1000 dilution: anti‐NRF2 (#ab92946, Abcam), anti‐glyceraldehyde‐3‐phosphate dehydrogenase (GAPDH, #ab8245, Abcam), anti‐phosphorylated AKT (p‐AKT, #4060, Cell Signaling Technology), anti‐total AKT (t‐AKT, #4685, Cell Signaling Technology) and anti‐PTEN (#ab267787, Abcam).
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