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Drx 400 nmr spectrometer

Manufactured by Bruker
Sourced in Germany, Egypt

The DRX-400 NMR spectrometer is a nuclear magnetic resonance (NMR) instrument designed for spectroscopic analysis. It operates at a frequency of 400 MHz and is capable of performing various NMR experiments to study the chemical structure and properties of samples.

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29 protocols using drx 400 nmr spectrometer

1

NMR Analysis and Preparative HPLC Purification

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Specific rotations were recorded using JASCO P-2000 digital polarimeter. Bruker DRX-400 NMR spectrometer with cryoprobe was used to record NMR spectra. The NMR spectrometer was equipped with 5 mm BBI (1H, COSY, edited HSQC, and HMBC) or BBO (13C) probe head with z-gradients. The 1H and 13C NMR chemical shifts were referenced to the residual solvent peaks for MeOH-d4 at δH 3.31 and δC 49.0 ppm; or DMSO-d6 at δH 2.50 and δC 39.5 ppm. Preparative RP-HPLC was performed using XTerra MS C18 Prep column (19 × 300 mm, 10 µm) on an Agilent 1260 Infinity Preparative-Scale LCMS Purification System hyphenated with Agilent 6130B single quadrupole MS as a detector. LCMS data were recorded using Agilent UHPLC 1290 Infinity coupled to Agilent 6540 accurate-mass quadrupole time-of-flight (QTOF)-ESIMS. Standard gradient conditions of 98% H2O (0.1% FA) to 100% CH3CN (0.1% FA) were run over 8.6 min using an Acquity UPLC BEH C18 (2.1 × 50 mm, 1.7 µm) column, all at a flow rate of 0.5 mL/min. The QTOF were set using the same parameter as previously reported [4 (link)].
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2

Spectroscopic Analysis of Organic Compounds

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Specific rotations were measured using JASCO P-2000 polarimeter. NMR spectra were obtained from Bruker DRX-400 NMR spectrometer equipped with Cryoprobe. The NMR spectrometer used a 5-mm BBI (1H, G-COSY, multiplicity-edited G-HSQC, and G-HMBC spectra) or BBO (13C spectra) probe heads equipped with z-gradients. Agilent 1260 Infinity Preparative-Scale LC/MS Purification System equipped with Agilent 6130B single quadrupole mass spectrometer detector was used to conduct preparative HPLC analyses. Agilent 5 Prep C18 column (10 mm × 30 mm) was used for HPLC runs. HPLC-MS experiment was performed on an Agilent UHPLC 1290 Infinity coupled with a diode array detector (DAD), and an Agilent 6540 accurate-mass quadrupole time-of-flight (QTOF) mass spectrometer equipped with a splitter and an ESI source. The analyses were conducted with Acquity UPLC BEH C18 column (2.1 mm × 50 mm, 1.7 μm) under standard gradient condition of 98% (0.1% formic acid) to 100% MeCN (0.1% formic acid) over 8.6 min, at a flow rate of 0.5 ml/min. The operating parameters for QTOF were the same as in (Sirota et al., 2018 (link)).
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3

Isolation and Structural Elucidation of Bioactive Metabolites

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Isolation procedure: ARTF-containing urine extract obtained in Section 3.3 (ca. 750 g), was dissolved in 1.5 L deionized water, filtered, and then subjected to XAD-2 macroporous resins column chromatography. Water, 20% methanol-water, 60% methanol-water, and 100% methanol were used to elute the column and get Fraction 1 to Fraction 4, respectively. The four metabolites, MI-1 (M108) (2.67 mg), MI-2 (M32) (818.30 mg), MI-3 (16.66 mg), MI-4 (M106) (34.62 mg), were isolated and purified from Fraction-3 by ODS column chromatography, Sephadex LH-20 column chromatography, and a Shimadzu preparative HPLC system sequentially, and their purity was above 90% determined by an Agilent 1200 HPLC.
Structure identification using NMR: MI-1 and the other three metabolites were dissolved in 0.15 mL and 0.5 mL DMSO-d6, respectively. Their 1H, 13C, heteronuclear singular quantum correlation (HSQC), heteronuclear multiple bond correlation (HMBC). NMR spectra were recorded on a Bruker DRX-400 NMR spectrometer (Bruker, Rheinstetten, Germany), using tetramethylsilane (TMS) as internal standard. All chemical shifts were reported in parts per million (ppm, δ), and coupling constants (J) in Hertz. UV spectra (200–400 nm) and HRMS data were recorded on the LC-MS-IT-TOF instrument with a PDA detector.
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4

Structural Analysis of Pumpkin Seed Oil

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The molecular structure of the PSO extracted by UAE was analyzed using 1HNMR. The oil sample was dissolved in the deuterated chloroform. 1HNMR spectra of the extracted PSO were recorded using a Bruker DRX‐400 NMR spectrometer (Bruker Instruments) with 1H nuclei observed at 400 MHz (Almoselhy, Allam, El‐Kalyoubi, & El‐Sharkawy, 2014).
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5

Characterization of Organic Compounds

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A JASCO P-2000 digital polarimeter was utilized to measure the specific rotations of the compounds. A Bruker DRX-400 NMR spectrometer was utilized to obtain the NMR spectra of the compounds. Specifications of the NMR spectrometer include a Cryoprobe, and a 5 mm BBI (1H, G-COSY, multiplicity-edited G-HSQC, and G-HMBC spectra) or BBO (13C spectra) probe heads equipped with z-gradients. Residual solvent peaks for DMSO-d6 were set at δH 2.50 and δC 39.5 ppm as reference signals in the 1H and 13C NMR spectra, respectively. A preparative HPLC experiment was performed using Agilent 1260 Infinity Preparative-scale LC/MS Purification System coupled to an Agilent 6130B single quadrupole mass spectrometer with an XTerra Prep MS C18 column (19 × 300 mm, 10 µm). The detection wavelength used in the preparative HPLC was 254 nm. An Agilent UHPLC 1290 Infinity, coupled with an Agilent 6540 accurate–mass quadrupole time-of-flight (QTOF) mass spectrometer, equipped with an ESI source was utilized to conduct the HPLC-MS experiment. The analyses were conducted with an Acquity UPLC BEH C18 column (2.1 × 50 mm, 1.7 µm), at a flow rate of 0.5 mL/min under standard gradient conditions of 2% MeCN (0.1% formic acid) to 100% MeCN (0.1% formic acid) over 8.6 min. The operating parameters for QTOF were the same as previously reported [8 (link)].
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6

Comprehensive Analytical Characterization Protocol

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JASCO P-2000 digital polarimeter was used to record the optical rotations while GE Healthcare Ultrospec 9000 spectrophotometer was used to obtain the UV spectra.
Bruker DRX-400 NMR spectrometer with Cryoprobe was used to collect the NMR spectra. 5-mm BBI (1H, G-COSY, multiplicity-edited G-HSQC, and G-HMBC spectra) or BBO (13C spectra) probe heads equipped with z-gradients were used.
Agilent 1260 Infinity Preparative-Scale LC/MS Purification System and Agilent 6130B single quadrupole mass spectrometer for LC and LC/MS Systems were used to perform the preparative HPLC analysis.
Agilent UHPLC 1290 Infinity coupled to Agilent 6540 accurate-mass quadrupole time-of-flight (QTOF) mass spectrometer which was equipped with a splitter and an ESI source were used to acquire the HRESIMS and MS/MS spectra. For over 15 min, under standard gradient condition of 100% water with 0.1% formic acid to 100% acetonitrile with 0.1% formic acid, the analysis was performed with a C18 4.6 × 75 mm, 2.7 μm column at flowrate of 2 mL/min. The operating parameters for QTOF were the same as in [6 (link)].
Nα-(2,4-Dinitro-5-fluorophenyl)-L-alaninamide (L-FDAA) and amino acid standards were purchased from Sigma Aldrich except D-allo-threonine which was purchased from Chem Cruz. Aspartic acid and glutamic acid were converted from asparagine and glutamine (Sigma Aldrich), respectively.
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7

Morroniside Characterization and Purification

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NMR spectra were performed on a Bruker DRX-400 NMR spectrometer at 400 MHz using CD3OD as solvent in Zhengzhou University. The purity of morroniside and the derivatives were checked on a Waters e2695 liquid chromatograph equipped with 2424 ELS detector and 2998 PDA detector. GF254 silica plate was purchased from Qingdao Haiyang Chemical Co. Ltd. (Qingdao, China). The Elisa kits of OC (H152) and ALP (A059-2) were purchased from Nanjing Jiancheng Bioengineering Institute (Nanjing, China). All the chemical reagents were purchased from Sinopharm Chemical Reagent Co., Ltd. (Shanghai, China). The morroniside was extracted and purified in the medicinal chemistry department, Heilongjiang University of Chinese Medicine.
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8

Comprehensive NMR Spectroscopic Analysis

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Nuclear Magnetic Resonance spectra (1H, 13C, APT, DEPT135, 1H-1H COSY, HMBC, HSQC and ROESY) were recorded on Bruker DRX 400 NMR spectrometer (Bruker Daltonics Inc., MU, Egypt). Deuterated NMR solvents including chloroform-d, methanol-d4 and DMSO-d6 were used. Chemical shifts were measured in parts per million (ppm) using TMS as an internal standard. HRESIMS was determined using LCMS-IT-TOF (Shimadzu, Tokyo, Japan). Column chromatography was performed using silica gel G 60 M (Merck, Germany) or Sephadex LH20 (Pharmacia, USA) as stationary phases. Thin-layer chromatography (TLC) plates pre-coated with silica gel 60 GF254 (20 × 20 cm × 0.2 mm thick, Merck) were used and spots were made visible by spraying vanillin-sulfuric acid reagent.
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9

NMR Spectroscopy and Chromatography Protocol

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1H and 13C-NMR spectra were recorded on a Bruker DRX-400 NMR spectrometer (1H: 400 MHz; 13C: 100 MHz). Chromatography was performed on reversed-phase silica Kieselgel 60 silanisiert (0,063–0,200 mm). Eluates were monitored by thin-layer chromatography (TLC) on silica 60 F254 (Merck) using butanol/acetic acid/water (BAW 8 : 1 : 1), visualized under UV light and revealed with NP-PEG.
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10

Melting Point and Spectral Analysis

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The melting points were determined by an uncorrected WRX-4 binocular microscope (Shanghai Yice Tech. Instrument Co., Shanghai, China). 1H-NMR and 13C-NMR spectral analyses were performed on a Bruker DRX-400 NMR spectrometer (Bruker, Rheinstetten, Germany). HRMS data were measured on an Agilent Technologies 6210 LC/MS TOF mass spectrometer (Agilent, Palo Alto, CA, USA). All reagent products from the Chinese Chemical Reagent Company were analytical or chemically pure.
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