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Lsrii multi laser analyzer

Manufactured by BD

The BD LSRII Multi-Laser Analyzer is a flow cytometry instrument designed for the analysis of cells and particles. It features multiple laser excitation sources and a range of detectors to enable the simultaneous measurement of multiple parameters on individual samples. The instrument is capable of providing detailed information about the physical and fluorescent characteristics of the analyzed samples.

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5 protocols using lsrii multi laser analyzer

1

Protein Synthesis Inhibition Assay

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To detect CHX-mediated inhibition of protein synthesis, Gli36-mCherry cells in a 24-well plate were prepared in parallel to the EV-uptake and –RNA translation experiment as described above. At the indicated post-centrifugation time points, culture medium was replaced with methionine- and cysteine-free medium containing Click-iT® homopropargylglycine (HPG; Invitrogen) for 30 min, and the cells were washed with PBS, trypsinized with 0.05% trypsin/0.53 mM EDTA (Corning Cellgro), resuspended in PBS, pelleted at 1,500 rpm (maximum rotor radius: 20.78 cm) for 5 min at 4°C, and resuspended in 80% ethanol for 15 min on ice. The fixed cells were conjugated with Alexa Fluor® 488 azide to reveal HPG-labeling, and stained with NuclearMask Blue stain according to manufacture’s protocol (Invitrogen). The labeled cells were resuspended in PBS for flow cytometry analysis on a BD LSRII Multi-Laser Analyzer (BD Biosciences).
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2

Caspase-3/7 Activation Assay

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Cell viability was assayed by flow cytometric detection of caspase activity. After 48 h in the specified condition, medium from each sample was collected. Cells were washed once with room temperature PBS, which was added to the collected medium. Cells were then detached with trypsin and added to the collected medium and saline. The resulting cell suspension was centrifuged for 5 min at 2,000 g, and the pellet was resuspended in DMEM supplemented with 2% FBS, containing CellEvent Caspase-3/7 Green Detection Reagent (Invitrogen). After 2 h at 37°, SYTOX AADvanced Dead Cell Stain was added, and samples were analyzed by fluorescence-activated cell sorting using a BD LSRII Multi-Laser Analyzer.
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3

Multilineage Profiling of Stem Cells

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Cells were washed in PBS, dissociated into single cells using dispase (Invitrogen), filtered through 40μm nylon cell strainers and labeled for different lineages using anti-Brachyury (Abcam; ab20680), anti-FoxA2 (Abcam; ab5074), anti-human nestin conjugated to Alexa 488 (ebioscience; 53-9843-80) and anti-human NCAM-PE (ebioscience; 12-0567-41). Unconjugated primary antibodies were visualized using anti-rabbit Alexa 488 (Invitrogen; A21206), anti-rabbit A647-PE (Invitrogen; A20991) and anti-goat Alexa 647 (Invitrogen; A21447). Briefly, cells were fixed in 4% paraformaldehyde, permeabilized in 0.3% Triton X-100 in PBS and blocked in 3% horse serum. A minimum of 25,000 cells were stained per condition in primary antibodies for 30 min on ice, washed, followed by secondary staining for 30 min in dark on ice. Flow cytometric analysis was performed on BD LSRII multilaser analyzer with FACSDiVa software (BD Biosciences).
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4

Analyzing HBV Infection in hNTCP-eGFP HepG2 Cells

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To assess the susceptibility of hNTCP-eGFP HepG2 clones to HBV infection, cells that had been challenged with HBV were first trypsinized and then fixed with FACS fixation buffer (1% PBS, 1% PFA) for 20 min at RT. After fixation, cells were centrifuged and re-suspended in permeabilization buffer (1% FBS, 0.1% saponin, in 1× PBS) for 20 min at RT. After permeabilization, cells were again centrifuged and were re-suspended with 50 ul of HBcAg primary antibody (1:200 diluted in permeabilization buffer; HBcAg goat-anti-mouse (Fisher Scientific, cat# MA7609 Waltham, MA) and incubated for 30 min at 4 °C. After the incubation cells were washed twice with FACS Buffer (1× PBS, 1% FBS). Cells were then re-suspended and incubated with an Alexa 647 anti-mouse secondary antibody (1:250 dilution in permeabilization buffer; Fisher Scientific, Waltham, MA) for 30 min at 4 °C. Cells were then washed twice with FACS buffer to remove any excess secondary antibody and were then run on a LSRII Multi-Laser Analyzer (BD, Franklin Lakes, NJ) at the Princeton flow cytometry core facility.
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5

Generating Lentiviral Pseudo-particles for NTCP Expression

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Lentiviral pseudo-particles were generated by co-transfecting 4.0E + 6 293T cells in a 10 cm tissue-culture plate using Xtremegene (Sigma-Aldrich, St. Louis, MO) with plasmids expressing the respective pLVX-NTCP-tagRFP proviral DNA, HIV-1 gagpol, and VSV-G at a ratio of 1/0.8/0.2. Supernatants were collected at 24, 48 and 72 h, pooled, and filtered through a 0.45 μm filter (Millipore, Burlington, MA). Filtered lentiviral supernatants were supplemented with polybrene (4 μg/mL, vol/vol) and (1:50, vol/vol) 1 M HEPES, aliquoted, and stored at −80 °C until use. Next, HepG2 cells were transduced with the human-, OWM- (with or without humanizing mutations), NWM- (with or without humanizing mutations), or prosimian-NTCP-tagRFP lentiviruses. After 3 days, expression of the fusion protein was assessed by both fluorescence microscopy using an EVOS microscope (Fisher Scientific, Waltham, MA) and LSRII Multi-Laser Analyzer (BD, Franklin Lakes, NJ) at the Princeton flow cytometry core facility. Each cell line generated showed greater than 90% of the cells expressing the respective fusion construct.
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