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79 protocols using anti β actin

1

Western Blot Analysis of c-Myc Protein Expression

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After washed twice with PBS, ICP2 cells were lysed for 30 min on ice, using RIPA lysis buffer (Beyotime, Nanjing, China) with PMSF (Beyotime). Total cell extracts were obtained by centrifugation. Protein concentrations were determined using Compat-AbleTM Protein Assay Preparation Reagent Set (Thermo Fisher Scientific, Shanghai, China). Proteins were separated by 10% SDS-PAGE and transferred to PVDF membrane (Merck-Millipore, Billerica, MA, United States). After blocking with 5% non-fat dry milk, the membrane was incubated with anti-c-Myc tag (1:1000; Clontech, Palo Alto, CA, United States). Anti-β actin (1:1000; Beyotime) was used to ensure protein loading control equally. After incubated with anti-c-Myc tag, the membranes were stripped using the stripping buffer (Beyotime), and re-hybridized with Anti-β actin. The BeyoECL Plus kit (Beyotime) was used for detection.
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2

Western Blot Analysis of Phosphorylated Proteins

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The expression or activity of the proteins of interest were detected by WB using protein-specific antibody as described previously [9 (link)]. The rabbit anti-phosphorylation p38 MAPK (Thr180/Tyr182), rabbit anti-phosphorylation p44/42 MAPK (Erk1/2) (Thr202/Tyr204) monoclonal antibody and rabbit anti-phosphorylation STAT3 (Phospho-Tyr705) antibody were provided by Cell signaling technologies (Danvers, MA, USA). Mouse anti-p38, rabbit anti-ERK, anti-STAT3 and mouse anti-GADPH and anti-β-actin antibodies were purchased from Beyotime Institute of biotechnology. Rabbit anti-LANA [9 (link)] and anti-RTA [35 (link)] antibodies were prepared by our laboratory.
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3

Mitochondrial Function and Apoptosis Analysis

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Anti-β-actin,5,5′,6,6′-tetrachloro-1,1′,3,3′-tetraethylbenzimidazolcarbocyanine iodide (JC-1) was purchased from Beyotime Institute of Biotechnology (Beyotime, Haimen, China). Fluorescein isothiocyanate (FITC)-conjugated Annexin-v antibody was purchased from Jiamay Biotech CO. LTD (Jiamay, Beijing, China). Thrombin was purchased from Sigma (Missouri, St. Louis, MO). Tirofiban hydrochloride and sodium chloride injection was purchased from Grand Pharma (China) Co. LTD (Wuhan, Hubei, China). 2′,7′-Dichlorofluorescin diacetate (DCFH-DA) was purchased from Sigma (St. Louis, MO).
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4

Characterizing Pluripotency Markers

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Primary mouse anti-Oct4, anti-Sox2, and anti-Klf4 were obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA); rabbit anti-mono-H3K27 from Abcam; rabbit anti-mono-,di-,tri-H3K4, rabbit anti-di-,tri-H3K27, and rabbit anti-Nanog from Cell Signaling Technology (Danvers, MA, USA); rabbit anti-Nestin from Sigma (Sigma, St. Louis, MO, USA); and anti-β-tubulin and anti-β-actin from Beyotime Institute of Biotechnology (Jiangsu, China). miRNA inhibitors were purchased from Biomics Biotechnologies (Jiangsu, China).
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5

Western Blot Analysis of PD-L1 Expression

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Briefly, whole cell was lysed with radio‐immunoprecipitation assay buffer (Beyotime, Shanghai, China) and separated using 10% SDS/PAGE [14]. Proteins were transferred and the membranes (Merck Millipore, Carrigtwohill, Ireland) were blocked at room temperature. Then, the anti‐PD‐L1 (dilution 1 : 2000; Abcam, Cambridge, MA, USA) or anti‐β‐actin (dilution 1 : 2000; Beyotime) antibodies were added to bind to the target proteins. Finally, horseradish peroxidase ‐conjugated secondary antibodies were added and the signals were visualized using an ECL Kit (Beyotime).
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6

Western Blotting of EMT Markers

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Western blotting was conducted as previously described.19 (link),20 (link) Briefly, the total proteins were extracted from the cells with RIPA lysis buffer, separated in 8–12% SDS-PAGE gels, and transferred onto PVDF (polyvinylidene fluoride) membranes (Millipore, Billerica, MA, USA). After blocking with 5% nonfat milk at room temperature for 1 hour, the membranes were incubated with the relevant primary antibodies followed by an appropriate secondary antibody. The primary antibodies in the current study included anti-UBE2O (1:800, Abcam), anti-E-cadherin, anti-Vimentin, anti-N-cadherin, anti-Snail, anti-Zeb1 and anti-Zeb2 (1:800, Cell Signaling Technology, Danvers, MA, USA). Anti-β-Actin (1:1000, Beyotime, Shanghai, China) was used as a loading control. The blots were visualized using ECL reagents (Pierce, Rockford, IL, USA) and a chemiluminescence imaging system (Bio-Rad, Richmond, CA, USA).
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7

Western Blot, Immunohistochemistry, and Immunoprecipitation Protocols

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Proteins in cells and tissues were extracted with RIPA lysis buffer (Thermo Fisher). Serum proteins were extracted with Serum Protein Extraction Kit (Qcheng Bio, China). Western blot assays were performed according to details previously reported [23 (link)]. the immuno-complexes were detected with ECL Western Blotting Substrate (Thermo Fisher), visualized with BIO-RAD (BIO-RAD Gel Doc XR+, USA). The following antibodies were used (11000): anti-β-actin (Beyotime, AF0003); anti-α-tubulin (Beyotime, AF0001); anti-GAPDH (Beyotime, AF0006); anti-HSP90 (Proteintech, 60,318–1-Ig); anti-HUR (Proteintech, 11,910–1-AP); anti-EIF2S1 (Proteintech, 11,170–1-AP); anti-VEGF (Proteintech, 19,003–1-AP); anti-Calnexin (Abcam, ab92573); anti-CD63 (Abcam, ab134045); anti-TSG101 (Abcam, ab125011); anti-CD81 (Proteintech, 66,866–1-Ig); anti-STUB1 (Proteintech, 55,430–1-AP).
IHC, IF and IP was performed as previously described [24 (link)]. IHC was performed with antibodies against HUR and VEGF (Proteintech, 1:200). IF was performed with antibody against CD31 (Proteintech, 11,265–1-AP, 1:200). The images were scanned by Pannoramic SCAN (3DHistech, Hungary). IP was performed with anti-HSP90 antibody (Proteintech, 1:200) and appropriate control IgG (Merck Millipore), and the immunoprecipitate was then collected by centrifugation and analysed by SDS-PAGE.
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8

Protein Expression Analysis of Cell Lines Exposed to MWCNTs

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Total protein of cell line lysate (including control and 0.5 μg/mL of MWCNTs groups) was collected, and then separated on SDS-PAGE and transferred to polyvinylidene fluoride membranes (Millipore, Billerica, MA, USA). The antibodies used were anti-CDK4 (Cell Signaling Technology, 1:1000, Danvers, MA, USA), anti-Cyclin D1 (Cell Signaling Technology, 1:1000, Danvers, MA, USA), anti-Cyclin D3 (Cell Signaling Technology, 1:1000, Danvers, MA, USA), anti-P53 (Cell Signaling Technology, 1:1000, Danvers, MA, USA), anti-β-actin (Beyotime, 1:1000, China). The immune complexes were detected by enhanced chemiluminescence (Millipore, Billerica, MA, USA). Blots were quantified by densitometry and normalized by use of β-actin to correct for differences in loading of the proteins. For densitometric analyses, the band was quantified using Image Lab software (BioRad laboratories, Hercules, CA, USA). Each experiment was performed at least twice.
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9

Synthesis and Characterization of PNP Monomer and Plant Sterols

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PNP monomer dry crystals (C6H5NO3, >99.9% purity, CAS 100-02-7) were purchased from Chengdu Kelong Chemical Reagent Factory, China (Fig. 1A).

Chemical structures of 4-nitrophenol, β-sitosterol, campesterol and stigmasterol.

Commercial grade PS (mixtures of β-sitosterol, campesterol and stigmasterol, >90% purity) were provided by Jiangsu Chunzhigu Biological products company (Fig. 1B).
The primary antibodies used for tissue immunohistochemistry and Western blotting were anti-Nrf2 (Abcam, ab53019; rabbit anti-human), anti-caspase-3 (Cell Signaling, Asp175; rabbit anti-human), anti-β-actin (Beyotime Institute of Biotechnology, AA128; mouse antibody), anti-Histone3 (Beyotime Institute of Biotechnology, AH433; rabbit antibody). The secondary antibodies used in this study were goat anti-rabbit IgG (H + L) (Beyotime Institute of Biotechnology, A0208) and goat anti-mouse IgG (H + L) (Beyotime Institute of Biotechnology, A0216).
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10

Western Blot Analysis of Apoptosis and NF-κB Signaling

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Cells were lysed using RIPA buffer and total protein was extracted from the lysate. Total protein concentration was determined using a bicinchoninic acid assay kit (KeyGen, Nanjing, China). Protein samples were separated by electrophoresis on a 13% sodium dodecyl sulfate–polyacrylamide gel and transferred to a polyvinylidene fluoride membrane (Millipore, Billerica, MA, USA). After blocking with 5% skim milk at 25 °C for 1 h, the membrane was incubated with the following primary antibodies: anti-Bcl-2 (1:1000; Abcam, USA), anti-Bax (1:1000; Abcam), anti-P-Iκnt (1:1000; Beyotime, China), anti-Iκnt (1:1000; Beyotime, China), anti-P-p65 (1:1000; Abcam), anti-p65 (1:1000; Abcam), and anti-β-actin (1:500; Beyotime, Hangzhou, China) overnight at 4 °C. After washing with Tris-buffered saline containing 0.1% Tween 20 (TBST), the membrane was incubated with horseradish peroxidase-labeled secondary antibody IgG (1:1000; Abcam, USA) for 1 h at 37 °C. Blots were visualized with an enhanced chemiluminescence kit (Amersham, Little Chalfont, UK) and quantified using the Image Pro-Plus 6.0 analysis system (Media Cybernetics, Rockville, MD, USA). Band density values were normalized to β-actin.
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