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7 protocols using daidzin

1

Compound Analysis of Botanical Extracts

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Puerarin, daidzin, liquiritin, naringin, glycyrrhizin (all purity ≥98.0%), and hesperidin (purity ≥92.0%) were purchased from Wako Pure Chemical Industries, Ltd. (Osaka, Japan). Neohesperidin (purity ≥99.0%) was obtained from ChromaDex (Irvine, CA). The HPLC-grade reagents methanol, acetonitrile, and water were obtained from J. T. Baker (Phillipsburg, NJ). Glacial acetic acid was obtained from Merck KGaA (Darmstadt, Germany).
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2

Sinhwakong Soybean Bioactive Compound Analysis

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Daidzein, daidzin, daidzin 6″-O-acetate, daidzin 6″-O-malonate, genistein, genistin, genistin 6″-O-acetate, genistin 6″-O-malonate, glycitein, glycitin, glycitin 6″-O-acetate, and glycitin 6″-O-malonate were purchased from FUJIFILM Wako Pure Chemical Corp (Osaka, Japan). CMS; dimethyl sulfoxide (DMSO); Gelrite™; indole-3-butyric acid (IBA); ascorbic acid; 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide; methyl jasmonate (MJ); and phosphate-buffered saline were purchased from Sigma-Aldrich Co., LLC (St. Louis, MO, USA). Mass-grade formic acid (FA), acetonitrile, methanol, and water were purchased from Thermo Fisher Scientific (Waltham, MA, USA). The other chemicals employed in this study were of American Chemical Society grade or higher. The Sinhwakong soybean variety (an elite cultivar) was supplied by the National Institute of Crop Science (Cheonju, Republic of Korea).
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3

Isoflavone Sourcing and Characterization

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Daidzein and formononetin were purchased from LKT laboratories, Inc (St. Paul, MN, USA). An isoflavone aglycone mixture from soybean (including daidzin and malonyldaidzin), 4’,7-dihydroxyflavone, and 2’-hydroxyflavanone were purchased from Wako Pure Chemical Industries, Ltd (Osaka, Japan), Extrasynthese (Genay, France), and Tokyo Chemical Industry (Tokyo, Japan), respectively.
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4

Zebrafish Nrf2 Mutant and Knockout Protocols

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In this study, AB (wild-type), Nrf2-mutant (nfe2l2afh318) [13 (link)], and Nrf2-knockout (nfe2l2ait321) zebrafish larvae were used. Both mutant and knockout lines were maintained by PCR-based genotyping. The former was maintained as described previously [14 (link)]. For the latter, the primer sets 5′-TATTGTGCAGCCCTAGTGTG and 5′-TAGCTGAAGTCGAACACCTC were used. Larvae used in these experiments were obtained from parents of AB, homozygous nfe2l2afh318 or homozygous nfe2l2ait321 by natural mating. The nfe2l2afh318 and nfe2l2ait321 lines can be obtained from the Zebrafish International Resource Center (http://zebrafish.org (accessed on 2022 January 5)) and the National BioResource Project Zebrafish (https://shigen.nig.ac.jp/zebra (accessed on 2022 January 5)), respectively.
Genistein, glycitin, glycitein, daidzin, daidzein, equol, and cinnamaldehyde were purchased from FUJIFILM Wako (Osaka, Japan). Genistin and sulforaphane were purchased from NAGARA Science (Gifu, Japan) and LKT Laboratories (St. Paul, MN, USA), respectively. For stock solutions, hydrogen peroxide and sodium arsenite were dissolved in MilliQ water (Merck-Millipore Billerica, MA, USA), sulforaphane in ethanol, and isoflavone compounds in dimethyl sulfoxide. They were diluted to final concentrations with E3+ medium (5 mM NaCl, 0.17 mM KCl, 0.33 mM CaCl2, 0.33 mM MgSO4 and 0.1 µg/mL methylene blue).
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5

Identification of Phytochemical Standards

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Apigenin, Apigenin 7-O-glucoside, daidzein, daidzin, daidzin 6″-O-acetate, daidzin 6″-O-malonate, genistein, genistin, genistin 6″-O-acetate, genistin 6″-O-malonate, glycitein, glycitin, glycitin 6″-O-acetate, and glycitin 6″-O-malonate were purchased from Fujifilm Wako Pure Chemical Industries, Ltd. (Osaka, Japan). Coumestrol, dimethyl sulfoxide (DMSO), kaempferol, kaempferol 3-O-glucoside (astragalin), isoquercitrin, isorhamnetin, luteolin, quercetin, and rutin were purchased from Sigma-Aldrich Co., LLC (St. Louis, MO, USA). The purities of the authentic compounds are listed in Table S1. Two quercetin diglycosides, two quercetin triglycosides, two kaempferol diglycosides, and three kaempferol triglycosides were purified from SLs. Mass-grade formic acid, acetonitrile, methanol, and water were purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA). Other chemicals used were of American Chemical Society grade or higher.
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6

Quantification of Eight Bioactive Compounds

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Eight reference standards (albiflorin, cinnamaldehyde, cinnamic acid, daidzin, glycyrrhizin, liquiritin, paeoniflorin, and puerarin) were purchased from Wako (Osaka, Japan) and the purities of these reference standards were greater than 98.0%, as evaluated via high-performance liquid chromatography (HPLC). The HPLC-grade reagents, methanol, acetonitrile, and water were obtained from J.T. Baker (Phillipsburg, NJ, USA). Analytical-grade glacial acetic acid was procured from Junsei (Tokyo, Japan).
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7

Soybean Larvae Metabolite Analysis

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Plants and Insects Soybean (Var. Enrei) and S. litura larvae were reared as previously described (Murakami et al. 2014) .
Chemicals L-α-[ 13 C 9 , 15 N]Phenylalanine was purchased from Cambridge Isotope Laboratories, Inc. (Tewksbury, MA, USA). Daidzein and formononetin were purchased from LKT laboratories, Inc. (St. Paul, MN, USA). Genistein and apigenin were purchased from Tokyo Chemical Industry Co, Ltd. (Tokyo, Japan). Kaempferol and 4′,7-dihydroxyflavone were purchased from Extrasynthese (Genay, France). 7-Hydroxyflavone, daidzin, linolenic acid, linoleic acid, L-glutamine, trimethylamine, and ethyl chloroformate were purchased from Wako Pure Chemical Industries, Ltd. (Osaka, Japan). Tetrahydrofuran was purchased from Kanto Chemical Co., Inc. (Tokyo, Japan). Gut extracts and elicitor solutions were prepared in phosphate buffer (50 mM Na 2 HPO 4 -NaH 2 PO 4, pH 8).
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