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3 protocols using gsk2801

1

Prostate Cancer Spheroid Culture and Drug Treatment

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All the indicated cell lines were purchased from the American Type Culture Collection. PC3 cells were cultured in RPMI 1640 medium and Ham's F12 medium (1:1; Gibco) containing 10% FBS (Gibco) and 1% penicillin–streptomycin (Gibco). DU‐145 were cultured in RPMI 1640 medium containing 10% FBS and 1% penicillin–streptomycin. PCa spheres were cultured in serum‐free DMEM/F12 medium (1:1, Gibco) supplemented with 20 ng/ml of basic human FGF (Sigma), 20 ng/ml of EGF (Sigma), 3 μg/ml of Insulin (Sigma), and 1× B27 (Gibco). 1 × 104 cells were seeded into low adhesion petri dishes (Greiner) and cultured for 6–8 days. About 20% of media was changed every 2 days. All cells were regularly tested for mycoplasma contamination. PC3 cells were treated with 1 μM of BAZ2A‐BRD inhibitors BAZ2‐ICR (SML1276, Sigma) and GSK2801 (SML0768, Sigma), EZH2 inhibitor GSK126 (S7061‐5MG, Lubio), BET inhibitors JQ1 (SML1524, Sigma), or DMSO as control. Fresh medium supplemented with the drugs was added every 2 days. PCa spheres were culture for 6 days. Cells were collected and transferred to a 24‐well plate to image and quantify the number of PCa spheres upon drug treatments.
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2

Synergistic Anti-Proliferative Effects of JQ1 and GSK2801

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Cells were seeded in 96 well plates (MDA-MB-231 cells, 5000 cells/well; HCC-1806 and SUM-159 cells, 8000 cells/well) in triplicate with 200 µl of media per well and allowed to adhere for 24 h [47 (link)]. JQ1 (SML1524) and GSK2801 (SML0768) were purchased from Sigma- Aldrich and dissolved in DMSO to make stock solutions (JQ1-20 mg/mL; GSK2801-10 mg/mL) and further dilutions were made with culture media immediately prior to each experiment. JQ1 and GSK2801 stock solutions were stored at 4 oC and -20 oC, respectively for no longer than 30 days. The spent medium was aspirated and the fresh medium containing drug concentrations ranging from 0.125 µM – 20 µM were used to treat the cells along with DMSO control. The combined treatments were carried out with JQ1 (25 nM, 50 nM, 125 nM, 250 nM, 500 nM, 1000 nM) combined with 10 µM and 20 µM of GSK2801 to assess the possible synergistic effects. After 72 h, spent media was aspirated; MTT was added and incubated for 3 h at 37 °C. MTT was removed, DMSO was added, and the plate was kept on shaker for 30 min at 60 RPM to dissolve crystals completely. The plate was read at 540 nm and OD recorded. Percent viability was calculated (ODtreated÷ODControl)×100 and the viabilities were plotted [48 (link)]. The combination index (CI) for each treatment combination was determined by the Chou-Talalay method [49 (link)] using CompuSyn software [50 ].
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3

Epigenetic Modulators Evaluation Protocol

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GSK2801, JQ1, UNC0642, UNC1999, BAY 598, GSK864, GSK484 and Tubastatin were provided by Sigma-Aldrich (St. Louis, MO, USA); TP-472 (Structural Genomics Consortium); 5-Azacytidine and SAHA from Abcam (Cambridge, UK); CN26, CN101, CN133, CN147, and C161 (Hooker laboratory). Unless otherwise indicated, all compounds were dissolved in DMSO.
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