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22 protocols using ns500

1

Nanoparticle Tracking Analysis of MVs

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MV size and concentration were measured using a NanoSight NS500 instrument with a 488 nm laser module and sCMOS camera module (Malvern Instruments, Worcestershire, UK). The small volume of MV samples obtained from ultracentrifugation was serially diluted in MilliQ water and then we preliminarily checked the numbers of MV particles in the diluted samples. After calculation of dilution factor to obtain approximately 8~9 × 108 particles/mL, MV samples were diluted in MilliQ water to such concentration and then NTA was performed to determine MV size and number of particles. NTA measurement yielded 50~100 particles per frame. Samples were loaded into the sample chamber. Videos were then recorded for 30 s three times. Captured data were analyzed using NTA 3.1 software build 3.1.46. All measurements were performed in triplicate at room temperature.
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2

Exosome Characterization by NTA

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Nanoparticle tracking analysis (NTA) was performed for exosome quantification and particle size determination using a NanoSight NS500 instrument (Malvern) equipped with a blue laser (405) and the NTA 3.1 analytical software. All experiments were carried out at 1:1,000 dilution in PBS, leading to particle concentrations around 1 × 108 particles/ml. The particle size range was 60–140 nm (Supplementary Figure 3A).
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3

Extracellular Vesicle Characterization by NTA

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Extracellular vesicle size and quantity were analysed using NS500 (Nanosight; Malvern Panalytical, Malvern, UK) NTA instrument. NanoSight relies on light scattering to visualise particles in the range of 100 nm to 2 μm, records their movement in 30 s video files, tracks individual particles and calculates concentration and size based on Brownian motions. The samples were diluted with D-PBS to reach optimal loading concentration of 107–109 particles per mL. Analysis was performed as described earlier1 (link).
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4

Isolation and Characterization of Tumor-Derived Exosomes

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Conditioned media were obtained from E0771/CD63-RFP cells grown at subconfluence for three to four days in exosome-depleted growth media (Gibco Laboratories, Carlsbad, CA, USA). TEXs were isolated from collected conditioned media by using the Exo-spin™ Exosome Purification Kit (Cell Guidance Systems, Cambridge, UK). The size distribution and concentration of exosomes were determined using a NanoSight NS500 (Malvern, Grovewood Road, UK) equipped with a 642-nm laser and a charge-coupled device (CCD) camera, and data were analyzed using Nanoparticle Tracking Analysis software [23 (link)].
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5

Nanoparticle Characterization Using NanoSight

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Nanoparticle tracking analyses were performed using a NanoSight NS500 instrument (NanoSight NTA 2.3 nanoparticle tracking and analysis release version build 0033; Malvern Instruments, Malvern, United Kingdom) following the manufacturer’s instructions. Samples were diluted 1:1000 with Dulbecco’s PBS to obtain 10:100 particles per image (optimal ∼50 particles per image). The NS500 instrument measured the rate of Brownian motion of nanoparticles in a light-scattering system that provides a reproducible platform for specific and general nanoparticle characterization (NanoSight, Amesbury, United Kingdom). Suspended nanoparticles were passed through the laser beam that traversed the sample chamber and scattered the light, discerning the nanoparticles through a microscope. The samples were mixed before introducing them into the chamber (temperature, 25°C), and the camera level was set to obtain an image that had sufficient contrast to clearly identify particles while minimizing background noise (camera level, 10; capture duration, 30 seconds). The captured videos (two videos per sample) were then processed and analyzed. Each video file was processed and analyzed to give the mean and mode of particle sizes, along with the concentration and the number of particles. An Excel spreadsheet was automatically generated and data were imported into GraphPad Prism 7 (La Jolla, CA).
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6

Fabrication of Ferulic Acid-Loaded Nanoparticles

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FBH were bought from the feed market in the governorate of Kafr El-Sheikh, Egypt. FBH was converted to nanoparticle size using the method of Khataee et al. [22 (link)] with a slight modification. To create the FBH-NPs, the FBH was ground to a micro-particle size range of 100–150 µm using a Black & Decker grinder (Model BD54958, Black & Decker Inc, Minneapolis, MN USA) and crushed using a high-energy planetary ball-mill (Model PM2400, Kian Madan Pars Co, Tehran, Iran) at a speed of rotation of 320 rpm for 2 h. The ball-milling procedure was carried out at atmospheric conditions (26 °C at 1 atm) with a 10:1 ball-to-powder mass ratio. Finally, the average size of the homogeneous FBH-NPs was determined using a zetasizer (NS500, Malvern Panalytical, Worcestershire, UK). The obtained FBH-NPs (with an average size of 81 ± 4 nm) were then packed in a dark glass vial without oxygen and used in the tests immediately. To limit antioxidant loss, all operations used to make FBH-NPs were carried out under controlled settings.
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7

Nanoparticle Size Analysis via NTA

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The size distribution was checked by the nanoparticle tracking analysis (NTA) method using a NanoSight NS500 (Malvern, Grovewood road, UK) by using minor modification of manufacturer’s methods. Samples were diluted sufficiently for the contrast and minimal background level. The quick measurement mode was performed to find the optimal condition. Then, total 5 numbers of particle motion video were recorded automatically using standard measurement mode (temperature: 20.3 or 20.4 °C and viscosity: 0.99 to 1.0 cP). All other conditions were constant.
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8

Exosome Characterization via Nanoparticle Tracking

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Cell line-derived exosomes were washed in 0.22-μm-filtered PBS and stored at 4°C until analysis. The exosomes were diluted to be within the recommended concentration range and the sample was automatically loaded onto the NS500 instrument (Malvern, Amesbury, UK). Five 60-s videos were captured for each sample during flow mode (camera settings: slide shutter 890, slider gain 146). Plasma-derived exosomes were diluted and loaded onto the NS500 instrument by a syringe at a constant flow of 20. Three 60-s videos were captured for each sample (camera settings: slide shutter 1200, slider gain 146). The videos were analysed with the NTA v3.1 software (Malvern).
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9

Quantifying B. cepacia Outer Membrane Vesicles

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The size and number of B. cepacia OMVs were measured using a NanoSight NS500 instrument with a 488 nm laser module and sCMOS camera module (Malvern Instruments, Worcestershire,UK) [39 (link)]. The purified OMVs were diluted in MilliQ water to a concentration of approximately 8–9 × 108 particles/mL for 50–100 particles per frame in the NTA measurement. OMV samples were loaded in the sample chamber and then videos were recorded for 30s three times. The captured data were analyzed using NTA 3.1 software build 3.1.46. All measurements were performedin triplicate at room temperature.
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10

Measuring Peptide/SSO Complex Size

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The size of the peptide/SSO complex was measured by Nanoparticle Tracking Analysis (NTA). The complexes were formulated as described above and measured on the NS500 instrument (Malvern Instruments, Malvern, Worcestershire, UK). The movement of nanoparticles for each sample was recorded five times (30 s each video). In order to process the videos, the camera gain and minimum detection threshold was set to 14 and 7, respectively.
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