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J 820 cd spectrometer

Manufactured by Jasco
Sourced in Japan

The J-820 CD spectrometer is a laboratory instrument designed to measure the circular dichroism (CD) of samples. It is used to analyze the structural properties of molecules, particularly proteins and other biomolecules. The J-820 CD spectrometer is capable of accurately measuring the absorption of left and right circularly polarized light by a sample, providing information about the sample's secondary structure and conformational changes.

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14 protocols using j 820 cd spectrometer

1

Measuring IFNγR Far-UV CD Spectra

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CD spectra were recorded on a model J-820 CD spectrometer (JASCO). Far-UV CD measurements were performed with 0.5 mg/mL of IFNγR in PBS using a 1-mm cell and a bandwidth of 1 nm. Spectra were recorded five times for each sample.
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2

CD Analysis of McpB LBD Binding to Boric Acid

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For CD analyses, Vivaspin 20 columns (10 kDa molecular weight cutoff, GE Healthcare) were used to exchange purified McpB LBD into CD buffer (20 mM sodium phosphate, 100 mM NaCl, pH 7.0). CD experiments were performed on a Jasco J-820 CD spectrometer (Tokyo, Japan) equipped with a 1-mm path length cuvette using 20 μM McpB LBD in the absence and presence of 100 μM boric acid. CD spectra (190–260 nm) were recorded at 25 °C. For thermal denaturation experiments, CD at 222 nm was monitored from 20 to 70 °C.
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3

Characterizing α-synuclein and Hsp60 interactions

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α-synuclein samples in the presence or absence of Hsp60 GW (or WT) were diluted to a final concentration of 0.2 mg/mL in 25 mM Tris buffer (pH 7.7 at 25 °C). For α-synuclein samples in the presence of Hsp60 GW (or WT), spectra of Hsp60 GW (or WT) were subtracted to obtain the net spectra of α-synuclein. Stability of Hsp60 AD was analyzed using 0.05–0.1 mg/mL proteins with buffer containing 25 mM Tris buffer (pH 7.7 at 25 °C) and 150 mM NaCl. Hsp60 AD samples were incubated overnight at 4–37 °C. The samples were measured on a J-820 CD spectrometer (JASCO, Tokyo, Japan) using a 0.1 cm path length synthetic quartz cuvette (GL Sciences, Tokyo, Japan). CD spectra (average of 16 spectra) were corrected for buffer signals.
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4

CD Spectroscopy of RecA Protein

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CD spectra were measured in a Jasco J-810 or J-820 CD spectrometer in step mode (data interval: 0.1 nm; time constant: 0.175 s; bandwidth: 2 nm). Temperature was controlled by a Peltier effect controller. A 1 × 1 cm quartz cell was used for quick mixing of added Mg2+ with the help of magnetic stirring. This approach was taken to avoid locally high Mg2+ concentrations, which can promote precipitation of RecA (25 (link)). On the other hand, because the path length of the cell was 1 cm, the UV absorption of samples was too high to measure CD signals below 210 nm.
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5

Circular Dichroism Spectroscopy of Biomolecules

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The AEMTS‐blocked I‐1, I‐2, N, and R were dissolved in a 10 mm Tris–HCl/1 mm EDTA buffer solution at pH 8.0 to make solutions of 6.9 μm concentration. The solution was poured into a quartz cell with a light path length of 1 mm, which was set in a cell holder of a Jasco J‐820 CD spectrometer (Jasco, Hachioji, Japan). The temperature of the cell was thermostated at 5.0 or 25.0 ± 0.1 °C with a circular water bath. The CD spectrum was measured with a wavelength from 190 to 260 nm, a scan speed of 50 nm·min−1, a response of 1 s, and an accumulation number of 16 times.
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6

CD Spectroscopy of VHH Variants

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CD spectra were measured with a J-820 CD spectrometer (Jasco, Japan) in a 1.0-mm-long quartz cuvette, as follows: band width 1.0 nm, resolution 0.1 nm, response 8 s, scan speed 2 nm/min. The concentrations of purified VHHs variants were 5 µM.
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7

Circular Dichroism Spectrometry of Proteins

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CD spectra were recorded on a model J-820 CD spectrometer (JASCO). Far-UV CD measurements were performed with 10 μM of protein in PBS using a 0.1 cm cell and a bandwidth of 1 nm. Spectra were recorded five times for each sample, and the results were averaged.
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8

CD Spectroscopy of Protein Samples

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CD spectra were recorded on a model J-820 CD spectrometer (JASCO). Far-UV CD measurements were performed with 0.15 mg/mL of a sample in PBS using a 1-mm cell and a bandwidth of 1 nm. Spectra were recorded five times for each sample.
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9

CD Spectra Analysis of Peptides

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CD spectra of peptides were measured by J-820 CD spectrometer (JASCO, Japan) following manufacturer’s protocol. The cell length was 1 mm and 100 μM of peptide in buffer was measured at room temperature. The spectra shown were the average of eight measurements for each sample and signals from buffer were subtracted.
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10

Circular Dichroism Analysis of Zein

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The CD spectra were obtained using a J-820CD spectrometer (Jasco Co., Tokyo, Japan) according to the procedure reported by Zhao, Miao, et al. (2022) with slight modifications. The zein samples (0.2 mg/mL) were prepared with 75% (v/v) ethanol aqueous solutions. The mean residue ellipticity (θ, deg⋅cm2⋅dmol−1) were recorded over the scanning wavelength range of 190–250 nm at a scanning rate of 100 nm/min with a constant nitrogen flow. The secondary structure, including α-helix, β-sheet, β-turn, and random coil, were quantified using CDPro software.
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