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Prep hplc

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Prep-HPLC is a high-performance liquid chromatography (HPLC) system designed for preparative-scale purification. It provides efficient separation and purification of compounds from complex mixtures.

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63 protocols using prep hplc

1

Synthesis of Triazole-Oxazolopyridine Compound

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Example 139

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A mixture of (4-methyl-1,2,4-triazol-3-yl)methanol (45.83 mg, 0.41 mmol), 5-[4-(trifluoromethoxy)phenyl]-3H-oxazolo[4,5-b]pyridin-2-one (60 mg, 0.20 mmol), PPh3 (106.26 mg, 0.41 mmol) and DIAD (81.92 mg, 0.41 mmol) in THF (3 mL) was stirred at 20° C. under N2 for 16 hours. The reaction was diluted with sat.NH4Cl (10 mL), and the mixture was extracted with EtOAc (10 mL×2). Then the combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give the crude product. The crude product was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN; 32-47% B over 8 minutes) to give the impure product. The impure product was triturated from i-Pr2O (10 mL) and purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN; 33-63% B over 6 minutes) to give the product (16.59 mg, 41.1 μmol, 20% yield) as a solid. 1H NMR (DMSO-d6 400 MHz) δH=8.48 (s, 1H), 8.14 (d, 2H), 7.88 (d, 1H), 7.81 (d, 1H), 7.48 (d, 2H), 5.30 (s, 2H), 3.79 (s, 3H). LCMS Rt=1.10 min in 2.0 min chromatography, MS ESI calcd. for C17H13F3N5O3 [M+H]+ 392.1, found 391.9.

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2

Synthesis of Trifluoroethoxy-substituted Pyridine Compound

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Example 20

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A mixture of A-2 (200 mg, 0.93 mmol), 5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-2-(2,2,2-trifluoroethoxy)pyridine (566.47 mg, 1.87 mmol), Pd(t-BuP3)2 (95.51 mg, 0.19 mmol) and K3PO4 (257.92 mg, 1.87 mmol) in 1,4-dioxane (2 mL) and water (0.2 mL) was stirred at 85° C. for 16 hours. The mixture was diluted with EtOAc (10 mL), filtered through silica gel, eluted with EtOAc (10 mL) and the filtrate concentrated to give the crude product, which was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN); 37-67% B over 10 minutes) to afford Compound 20 (48.55 mg, 0.16 mmol) as a solid. 1H NMR (DMSO-d6 400 MHz) δ=11.80 (br s, 1H), 8.48 (d, 1H), 8.10 (dd, 1H), 7.38 (s, 2H), 7.34 (s, 1H), 7.07 (d, 1H), 5.04 (q, 2H). LCMS Rt=1.20 min using Method A, MS ESI calcd. for C14H10F3N3O3 [M+H]+ 311.1, found 310.8.

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3

Synthesis of 3-[chloro(difluoro)methyl]-6-[5-fluoro-6-[1-(trifluoromethyl)cyclobutoxy]-3-pyridyl]-[1,2,4]triazolo[4,3-a]pyrazine

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Example 10

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A mixture of 3-[chloro(difluoro)methyl]-6-[5-fluoro-6-[1-(trifluoromethyl)cyclobutoxy]-3-pyridyl]-[1,2,4]triazolo[4,3-a]pyrazine (1.4 g, 3.2 mmol) and AgOTf (8.22 g, 31.98 mmol), in mixed solvent Methanol (14 mL) and DMF (14 mL) was stirred at 90° C. for 24 hours. After cooling to room temperature, the reaction mixture was treated with brine (40 mL), and the precipitate was filtered. The filtrate was extracted with EtOAc (40 mL×2). The combined organic phase was washed with brine (20 mL), dried over Na2SO4 and concentrated to give a crude product. The crude product was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN; 57-67% B over 8 minutes) to give the product (240 mg). Another batch was started with 1.2 g of A24, and about 110 mg of the product was obtained by Prep-HPLC (Boston Prime C18 (150 mm×30 mm, 5 μm) A=H2O (0.05% NH4OH) and B═CH3CN; 50-80% B over 9 minutes). Two batches of the product were combined and lyophilized to give the product as a solid. 1H NMR (CDCl3, 400 MHz) δH=9.51 (d, 1H), 8.49 (d, 1H), 8.47 (d, 1H), 8.05 (dd, 1H), 3.98 (s, 3H), 2.98-2.86 (m, 2H), 2.81-2.72 (m, 2H), 2.11-1.93 (m, 2H). LCMS Rt=1.30 min in 2 min chromatography, 10-80AB, MS ESI calcd. for C17H14F6N5O2 [M+H]+ 434.1, found 433.9.

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4

Synthesis of Fluorinated Triazolo[4,3-a]pyrazine Derivative

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Example 3

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A mixture of 6-chloro-3-(trifluoromethyl)-[1,2,4]triazolo[4,3-a]pyrazine (100 mg, 0.45 mmol), Pd(dppf)Cl2 (49.31 mg, 0.07 mmol), Cs2CO3 (292.77 mg, 0.90 mmol) and 3-fluoro-5-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)-2-(2,2,2-trifluoro-1,1-dimethyl-ethoxy)pyridine (235.31 mg, 0.67 mmol) in 1,4-Dioxane (2 mL) and Water (0.20 mL) was stirred at 80° C. for 16 hours. After cooling to room temperature, the mixture was concentrated to a residue. The residue was diluted with H2O (20 mL) and extracted with EtOAc (20 mL×2). The combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give the crude product. The crude product was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 10 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN; 55-75% B over 6 minutes) to give the product (81.74 mg, 0.20 mmol) as a solid. 1H NMR (400 MHz, CDCl3) δH=9.59 (d, 1H), 8.53 (d, 1H), 8.40 (s, 1H), 8.03 (dd, 1H), 1.89 (s, 6H). LCMS Rt=1.09 min in 2 min chromatography, MS ESI calcd. for C15H11F7N5O [M+H]+ 410.1, found 410.0.

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5

Synthesis of Compound 40 via HATU Coupling

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Example 40

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To a solution of Compound 16 (80 mg, 0.23 mmol) in DMF (3 mL) was added HATU (155 mg, 0.41 mmol), DIPEA (87.81 mg, 0.68 mmol) and morpholine (23.68 mg, 0.27 mmol). The resulting mixture was stirred at 15° C. for 16 hours. Saturated NH4Cl aqueous (20 mL) and EtOAc (20 mL) were added to the reaction solution. After separation, the organic layer was washed with brine (20 mL×2), dried over anhydrous Na2SO4, filtered and concentrated to give the crude product that was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN); 37-67% B over 10 minutes) to afford Compound 40 (8.33 mg, 0.02 mmol) as a solid. 1H NMR (DMSO-d6 400 MHz) δ=7.76 (d, 2H), 7.60 (d, 1H), 7.51-7.41 (m, 4H), 4.91 (s, 2H), 3.72-3.66 (m, 2H), 3.60-3.54 (m, 4H), 3.47-3.41 (m, 2H). LCMS Rt=1.17 min using Method A, MS ESI calcd. for C20H18F3N2O5 [M+H]+ 423.1, found 423.0.

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6

Pyrrolidine Coupling of Trifluoromethyl Compound

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Example 17

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To the mixture of Compound 16 (100. mg, 0.28 mmol), HATU (161.4 mg, 0.42 mmol) and DIEA (73.04 mg, 0.57 mmol) in DMF (2 mL) was added pyrrolidine (24.16 mg, 0.34 mmol) and the mixture was stirred at 15° C. for 16 hours. The mixture was diluted with sat. NH4Cl (10 mL), extracted with EtOAc (10 mL×2). The combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give the crude product, which was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN); 40-70% B over 10 minutes) to afford Compound 17 (19.77 mg, 0.05 mmol) as a solid. 1H NMR (DMSO-d6+D2O 400 MHz) δH=7.73 (d, 2H), 7.48 (s, 1H), 7.44-7.40 (m, 4H), 4.70 (s, 2H), 3.52 (t, 2H), 3.28 (t, 2H), 1.97-1.87 (m, 2H), 1.83-1.71 (m, 2H). LCMS Rt=1.26 min using Method A, MS ESI calcd. for C20H18F3N2O4 [M+H]+ 407.1, found 407.0.

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7

Synthesis of 6-Chloro-3-(Difluoromethyl)-[1,2,4]Triazolo[4,3-a]Pyrazine Derivative

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Example 154

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A mixture of 6-chloro-3-(difluoromethyl)-[1,2,4]triazolo[4,3-a]pyrazine (300 mg, 1.47 mmol), [4-(4,4,5,5-tetramethyl-1,3,2-dioxaborolan-2-yl)phenyl]methanol (1.03 g, 4.40 mmol), Cs2CO3 (955.61 mg, 2.93 mmol) and Pd(dppf)Cl2 (160.96 mg, 0.22 mmol) in 1,4-dioxane (10 mL) and water (0.50 mL) was stirred at 70° C. under N2. The mixture was cooled to room temperature and filtered through Celite. The filtrate was concentrated to give a residue. The residue was diluted in EtOAc (20 mL), washed with water (20 mL×2) and brine (10 mL), dried over anhydrous Na2SO4, filtered and concentrated to give the crude product. The crude product was purified by flash chromatography on silica gel (EtOAc in PE=30% to 80%) to give the product (330 mg).

The impure product (100 mg) was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B=CH3CN; 20-40% B over 6 minutes) to give the product (29.12 mg, 0.11 mmol) as a solid. 1H NMR (400 MHz DMSO-d6) δH=9.66 (s, 1H), 9.13 (s, 1H), 8.09 (d, 2H), 7.85 (t, 1H), 7.49 (d, 2H), 5.31 (t, 1H), 4.58 (d, 2H). LCMS Rt=1.04 min in 2.0 min chromatography, 0-60AB, purity 100%, MS ESI calcd. for C13H11F2N4O [M+H]+277.1, found 276.9.

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8

Synthesis of Compound 26 via HATU Coupling

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Example 26

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To the mixture of Compound 24 (150 mg, 0.4100 mmol), HATU (232.79 mg, 0.61 mmol) and DIEA (105.37 mg, 0.82 mmol) in DMF (2 mL) was added pyrrolidine (34.86 mg, 0.49 mmol) and the mixture was stirred at 15° C. for 16 hours. The mixture was diluted with sat.NH4Cl (10 mL) and extracted with EtOAc (10 mL×2). The combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give a residue that was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm) A=H2O (10 mM NH4HCO3) and B═CH3CN); 43-73% B over 10 minutes) to afford Compound 26 (72.24 mg, 0.17 mmol) as an oil. 1H NMR (DMSO-d6+D2O 400 MHz) δH=7.77 (d, 2H), 7.58 (s, 1H), 7.46-7.33 (m, 4H), 4.07 (t, 2H), 3.30 (t, 2H), 3.17 (t, 2H), 2.73 (t, 2H), 1.82-1.73 (m, 2H), 1.71-1.62 (m, 2H). LCMS Rt=1.20 min ung Method A, MS ESI calcd. for C21H20F3N2O4 [M+H]+ 421.1, found 421.0.

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9

Synthesis and Purification of 3-[[(2R)-pyrrolidin-2-yl]methyl]-5-[4-(trifluoromethoxy)phenyl]-1,3-benzoxazol-2-one Derivative

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Example 96

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A mixture of 3-[[(2R)-pyrrolidin-2-yl]methyl]-5-[4-(trifluoromethoxy)phenyl]-1,3-benzoxazol-2-one hydrochloride (100 mg, 0.24 mmol), Et3N (0.17 mL, 1.21 mmol) and methanesulfonyl chloride (55.23 mg, 0.48 mmol) in DCM (25 mL) was stirred at 20° C. for 16 hours. The reaction was diluted with sat.NH4Cl (15 mL), and extracted with DCM (10 mL×2). The combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give the crude product. The crude product was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm), A=H2O (10 mM NH4HCO3) and B═CH3CN; 55-75% B over 6 minutes) to give the product (22.24 mg, 48.7 μmol, 20% yield, 100%) as a solid. 1H NMR DMSO-d6+D2O 400 MHz δH=7.77 (d, 2H), 7.59 (s, 1H), 7.46-7.34 (m, 4H), 4.13-4.07 (m, 1H), 3.98-3.86 (m, 2H), 3.31-3.17 (m, 2H), 2.83 (s, 3H), 2.04-1.78 (m, 4H). LCMS Rt=1.25 min in 2 min chromatography, MS ESI calcd. for C20H20F3N2O5S [M+H]+ 457.1, found 457.1.

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10

Synthesis of Trifluoromethoxy-Substituted Benzoxazolone

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Example 91

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A mixture of 3-[[(2S)-pyrrolidin-2-yl]methyl]-5-[4-(trifluoromethoxy)phenyl]-1,3-benzoxazol-2-one hydrochloride (100 mg, 0.24 mmol), Et3N (0.17 mL, 1.21 mmol) and methanesulfonyl chloride (55.23 mg, 0.48 mmol) in CH2Cl2 (10 mL) was stirred at 25° C. for 16 hours. The reaction was quenched with sat.NH4Cl (10 mL), and the mixture was extracted with CH2Cl2 (10 mL×2). The combined organic phase was washed with brine (10 mL), dried over Na2SO4, filtered and concentrated to give the crude product. The crude product was purified by Prep-HPLC (Waters Xbridge (150 mm×25 mm, 5 μm), A=H2O (10 mM NH4HCO3) and B═CH3CN; 55-75% B over 6 minutes) to give the product (47.27 mg, 0.10 mmol, 43% yield) as a solid. 1H NMR DMSO-d6+D2O 400 MHz δH=7.78 (d, 2H), 7.61 (s, 1H), 7.48-7.38 (m, 4H), 4.13-4.07 (m, 1H), 3.97-3.86 (m, 2H), 3.31-3.20 (m, 2H), 2.86 (s, 3H), 2.05-1.79 (m, 4H). LCMS Rt=1.26 min in 2.0 min chromatography, MS ESI calcd. for C20H20F3N2O5S [M+H]+ 457.1, found 457.0.

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