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10 protocols using oleic acid

1

Membrane Fluidity of Bacterial Mutants

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The WT and ΔfakA mutant strains were grown to mid-exponential and stationary phase in 5 mL of TSB at 37 °C with shaking in Falcon tubes. Each strain was grown in the presence and absence of 20% human serum (v/v) or the fatty acid mix: oleic acid (18:1), linoleic acid (18:2), and arachidonic acid (20:4) (Nu-Chek Prep, Inc., Elysian, MN), each at a final concentration of 100 μM. Cultures were pelleted by centrifugation, washed, and resuspended in normal saline at a McFarland reading of 0.9. Cell membrane fluidity was measured by polarizing spectrofluorometry using a BioTek Synergy H1 plate reader (BioTek Instruments, Winooski, VT) with the fluorescent probe, 1,6-diphenyl-1,3,5-hexatriene (DPH).
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2

Oxidative Stress Response in Bacterial Mutants

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The WT and ΔfakA mutant strain were grown to stationary phase in 7 mL of MHB50 at 37 °C with shaking for 24 hours in Falcon tubes. Both strains were grown in the presence and absence of the fatty acid mix: oleic acid (18:1), linoleic acid (18:2), and arachidonic acid (20:4) (Nu-Chek Prep, Inc., Elysian, MN), each at a final concentration of 100 μM. Cultures were pelleted by centrifugation, resuspended in 7 mL MHB50 containing the fluorogenic dye, 2’,7’-dichlorodihydrofluorescein diacetate (H2DCFDA) at a concentration of 10 μM, and incubated for 45 minutes at 37°C protected from light. Cultures were pelleted by centrifugation, washed with saline, and resuspended in 7 mL of MHB50. Cells were added in triplicate to a black Nunc 96-well flat-bottom microplate in the presence or absence of the fatty acid mix with a final volume of 200 μL. Reactive oxygen species were measured by fluorescence readings (λ excitation=485 nm, λ emission=535 nm) using a BioTek Synergy H1 plate reader set at 37 °C for 8 hours.
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3

Inducing Dauer State in C. elegans

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Animals were induced into dauer by starvation as well as recovered on peptone-less NGM plates seeded with E. coli OP50 pre-loaded with oleic acid (NuChek Prep, Inc.; Elysian, Minnesota) as described by Devkota et al., 2017 (link). OP50 was grown overnight at 37°C in liquid LB supplemented with 600 μM of oleic acid or with an equivalent volume of ethanol (the oleic acid solvent) to serve as the control. Cultures were pelleted and washed several times with M9 buffer (Stiernagle, 2006 ) and resuspended at a 10x concentration. The 10x OP50 was seeded onto peptone-less NGM plates and allowed to dry overnight before use. At least three independent replicates were performed.
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4

Membrane Fluidity Measurement in Bacterial Mutants

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The WT and ∆fakA mutant strains were grown for 5 and 24 hours in 20 mL of TSB at 37 ℃ with shaking in Falcon tubes. Each strain was grown in the presence and absence of 20% human serum (vol/vol) or the fatty acid mix: oleic acid (18:1), linoleic acid (18:2), and arachidonic acid (20:4) (Nu-Chek Prep), each at a final concentration of 100 µM. Cultures were pelleted by centrifugation, washed, and resuspended in normal saline at a McFarland reading of 0.9. Cell membrane fluidity was measured by polarizing spectrofluorometry using a BioTek Synergy H1 plate reader (BioTek Instruments, Winooski, VT, USA) with the fluorescent probe 1,6-diphenyl-1,3,5-hexatriene.
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5

Oxidative Stress Response in Bacteria

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The WT and ∆fakA mutant strains were grown in 7 mL of MHB50 at 37°C with shaking for 24 hours in Falcon tubes. Both strains were grown in the presence and absence of the fatty acid mix: oleic acid (18:1), linoleic acid (18:2), and arachidonic acid (20:4) (Nu-Chek Prep), each at a final concentration of 100 µM. Cultures were pelleted by centrifugation, resuspended in 7 mL of MHB50 containing the fluorogenic dye H2DCFDA at a concentration of 10 µM, and incubated for 45 minutes at 37°C protected from light. Cultures were pelleted by centrifugation, washed with saline, and resuspended in 7 mL of MHB50. Cells were added in triplicate to a black Nunc 96-well flat-bottom microplate in the presence or absence of the fatty acid mix, with a final volume of 200 µL. Reactive oxygen species were measured by fluorescence readings (λ excitation = 485 nm, λ emission = 535 nm) using a BioTek Synergy H1 plate reader set at 37°C for 8 hours.
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6

Synthesis of Amphiphilic Nanocarriers for Drug Delivery

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4-(Aminomethyl) pyridine, 2-picolylamine, 4-(2-aminoethyl) morpholine, 1-(2-aminoethyl) piperidine, N-(3-dimethylaminopropyl)-N′-ethyl carbodiimide hydrochloride (EDC), hydroxybenzotriazole (HOBt), dimethyl aminopyridine (DMAP), dichloromethane (DCM), n-hexane, ethyl acetate, sodium sulphate, sodium chloride, deuterated chloroform, deuterated dimethyl sulfoxide, deuterium oxide, and Pluronic F-127 were purchased from Sigma-Aldrich. For all aqueous preparations, Milli-Q water was used. Monoolein (MO) and oleic acid (OA) were procured from Nu-chek Prep (GC > 99%), and SN-38 was obtained from Adooq bioscience.
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7

Lipid-based Compound Preparation Protocol

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Glycerol-1-monooleate and oleic acid were purchased from Nu-Chek-Prep (USA), while N-oleoyl glycine was purchased from Avanti polar lipids (USA). The rest of the chemicals and reagents, including amino acids and different buffers, were bought from Sigma-Aldrich (India). All the reagents and chemicals were bought in their most pure available form and used without further purification.
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8

Lipid Profiling of Immune Cells

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Monoclonal anti-ceramide antibody (mouse IgM, clone MID 15B4), ROS inhibitors APDC and BHA, and triacsin C were purchased from Sigma. All caspase inhibitors were from R&D Systems and Biovision. Ceramide synthesis inhibitor fumonisin B1 and myriocin (a serine palmitoyltransferase) were from Cayman Chemical. BODIPY-C16 FA was purchased from Thermo Fisher Scientific. All flow cytometric antibodies were purchased from Biolegend. All FA sodium salts were from Nu-Chek Prep, Inc. Palmitic acid (PA, 5mM), stearic acid (SA, 5mM) oleic acid (OA, 5mM), linoleic acid (LA, 5mM) and ω-3 eicosapentaenoic acid (EPA) were prepared with 2mM endotoxin-free BSA in PBS, sonicated until dissolved and filtered through 0.2μM sterile filter.
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9

Fatty Acid Analysis of Botanical Compounds

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TWM was obtained from Qianjin Xieli Pharmaceutical Co., Ltd (Hunan, China). TP (>98% pure) was provided by Guilin Sanjin Biologics Co., Ltd (Guanxi, China). Docosahexaenoic acid (C22:6n3), docosanoic acid (C22:0), eicosapentaenoic acid (C20:5n3), eicosatrienoic acid (C20:3n6), arachidonic acid (C20:4n6), arachidic acid (C20:0), nonadecadienoic acid (C19:2n6), γ-linolenic acid (C18:3n6), α-linolenic acid (C18:3n3), linoleic acid (C18:2n6), oleic acid (C18:1n9), cis-vaccenic acid (C18:1n7), stearic acid (C18:0), palmitic acid (C16:0), palmitoleic acid (C16:1n7), myristic acid (C14:0) and lauric acid (C12:0) were purchased from Nu-Chek Prep (Elysian, MN, USA). Their purities were above 98%. Trimethylsilane diazomethane (TMSCHN2) in n-hexane (2 mol/L) was purchased from Energy Chemical (Shanghai, China). The other chemical reagents were purchased from Xilong Scientific Co., Ltd (Guangdong, China).
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10

Fatty Acids Preparation and Handling

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Fatty acids α-linolenic acid (ALA, 18:3 ω3), linoleic acid (LA, 18:2 ω6) and oleic acid (OA; 18:1 ω9) (Nu-Chek Prep, Inc., Elysian, MN) were prepared under a nitrogen atmosphere and then stored at − 80 °C. Working solutions of 10 mg/ml (~ 35 mM) were diluted in ethanol and were handled on ice and in the dark.
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