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2 protocols using mettl14

1

RNA Immunoprecipitation (RIP) Assay for m6A detection

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An RIP Kit (IEMed-K303, IEMed) was used for the RNA immunoprecipitation (RIP) assay. Tissues of DRGs (0.1–0.2 g) were collected for each sample and then mechanically sheared in RIP lysis buffer containing a protease inhibitor cocktail and RNase inhibitor using a homogenizer. After centrifugation (4°C, 15 minutes, 12,000g), the supernatant was collected and split into 3 fractions: input, IP, and IgG. Antibodies against m6A (3 μg; Synaptic Systems), METTL14 (3 μg; ABclonal), normal rabbit IgG, and Protein A/G beads were added to the supernatant and incubated at room temperature for 1 hour. Beads were collected and washed 5 times with RIP washing buffer, and the RNA was eluted from the beads by addition of 20 μL RNase-free water. Purified RNA was subjected to qPCR to determine the presence of binding targets.
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2

Molecular Mechanisms of mRNA Modification

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ATF4 (rabbit, 11815S), p-mTOR (rabbit, 5536S), mTOR (rabbit, 2983S), p-p70S6K (rabbit, 9205S), p70S6K (rabbit, 2708S), pS6 (rabbit, 4857S), LC3B (rabbit, 3868S), and sequestosome 1 (SQSTM1, rabbit, 8025) monoclonal antibodies were purchased from Cell Signaling Technology (Shanghai, China). DDIT4 (rabbit, 10638-1-AP) and YTHDF2 (rabbit, 24744-1-AP) polyclonal antibodies were purchased from Proteintech. FTO (rabbit, ab126605), WTAP (rabbit, ab195380), ALKBH5 (rabbit, ab69325), and m6A (mouse, ab208577) antibodies were purchased from Abcam. METTL3 (rabbit, a8370), and METTL14 (rabbit, a8530) polyclonal antibodies were purchased from ABclonal. Compound 968 was purchased from Sigma-Aldrich (SML1327). Actinomycin D was purchased from Selleck Chemicals (S8964). Chloroquine (CQ) was obtained from Sigma-Aldrich (C6628). Meclofenamate sodium was purchased from MCE (HY-B1320). CB839 was purchased from Selleck Chemicals (S7655).
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