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97 protocols using penicillin streptomycin

1

NK-92 Cell Culture and Stimulation

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NK-92 cells were cultured in MyeloCult H5100 medium (STEMCELL) containing penicillin–streptomycin (Gemini Bio-Products) and 100 IU/ml of recombinant human IL-2. K562 and Jurkat cells were cultured in RPMI-1640 medium (Gibco) containing 10% fetal bovine serum (FBS) and penicillin–streptomycin. A549 and HeLa cells were cultured in DMEM (Gibco) containing 10% FBS and penicillin–streptomycin. For stimulation, NK-92 cells were washed with phosphate-buffered saline (PBS) and rested overnight in MyeloCult H5100 without IL-2 and then cultured in MyeloCult H5100 with 50 ng/ml of IL-15, IL-21, IL-15 + IL-21, or without any cytokine for 3 days, washed with PBS, and cultured in Advanced RPMI-1640 (Gibco) containing penicillin–streptomycin and 2 mM l-glutamine (Gemini Bio-Products) continuously without cytokine or with 50 ng/ml of IL-15, IL-21, IL-15 + IL-21 for 2 days.
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2

Breast Cancer Cell Line Maintenance

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All cell lines were originally obtained from the American Type Culture Collection (ATCC, Manassas, VA, USA). MCF10A cells were maintained in DMEM/F12 (Invitrogen, Waltham, MA, USA, Cat. #10565-018) supplemented with 5% Horse Serum (Invitrogen, Waltham, MA, USA, Cat. #26050-088), 1% Penicillin/Streptomycin (Gemini Bio-Products, West Sacramento, CA, USA, Cat. #400-109), 20 ng/mL Human EGF (Gibco, Grand Island, NY, USA, Cat. #PHG0313), 10 µg/mL Insulin (Gemini Bio-Products, West Sacramento, CA, USA, Cat. #800-112), 0.5 µg/mL Hydrocortisone (Sigma-Aldrich, Burlington, MA, USA, CAS #H0135), and 0.1 µg/mL Cholera Toxin (Sigma-Aldrich, Burlington, MA, USA, CAS #9012-63-9). MCF7 and MDA-MB-231 cells were maintained in DMEM (Corning, Corning, NY, USA, Cat. #10-017-CV) supplemented with 10% Fetal Bovine Serum (Gemini Bio-Products, West Sacramento, CA, USA, Cat. #100-106) and 1% Penicillin/Streptomycin (Gemini Bio-Products, West Sacramento, CA, USA, Cat. #400-109).
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3

Culturing Human Pancreatic Cell Lines

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The nontransformed human pancreatic ductal epithelial (HPDE) cell line
is from Ming-Sound Tsao from the Department of Laboratory Medicine and
Pathobiology at the Ontario Cancer Institute (University Health Network-Princess
Margaret Hospital, Toronto) and the Department of Medical Biophysics (University
of Toronto, Ontario, Canada). The pancreatic ductal adenocarcinoma (PDAC) cell
lines (Hs766T, MIA PaCa-2, and PANC-1) are from the American Type Culture
Collection (ATCC). HPDE cells are cultured in Keratinocyte-SFM (Life
Technologies) supplemented with prequalified human recombinant Epidermal Growth
Factor 1-53 (Life Technologies), Bovine Pituitary Extract (Life Technologies),
and 1% v/v penicillin-streptomycin (Gemini BioProducts). Hs766T, MIA
PaCa-2, and PANC-1 cells are grown in high glucose, L-glutamine
Dulbecco’s Modified Eagle Medium (DMEM) (Life Technologies) with
10% fetal bovine serum and 1% v/v penicillin-streptomycin
(Gemini BioProducts). Cells are cultured at 5% CO2 and
37°C.
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4

Tracking HSV-1 Virion Trafficking

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The GFP-VP26 HSV-1 KOS strain (gift from Dr. Lynn Enquist, Princeton University) has VP26 tagged at its N-terminus with a GFP tag and expressed under its native promoter at levels equivalent to wild type strains, as described [30 (link)]. As control, an HSV-1 strain expressing free GFP not coupled to a viral protein was used. Virus stocks were propagated by infection of Vero cells grown in Dulbecco’s Modified Eagle’s Medium (DMEM) with the addition of 10% fetal bovine serum and 1% penicillin/streptomycin (Gemini Bio-Products). Infections for propagation were performed at an MOI = 0.01 pfu/ml and harvested 72 hours post infection (hpi) by scraping into the media. Collected cells were freeze-thawed and sonicated to release viral particles from the cytoplasm. Virus concentration was determined by plaque assays on Vero cells. Confluent human foreskin fibroblasts (HFFs) with less than 12 passages and MRC5 fetal lung fibroblast cells with less than 30 passages were cultured as described for Vero cells and infected with viral stocks at an MOI = 5 pfu/ml.
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5

MERS-CoV Jordan Strain Propagation

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The Jordan MERS-CoV strain (GenBank accession no. KC776174.1, MERS-CoV-Hu/Jordan-N3/2012) was kindly provided by Kanta Subbarao (National Institutes of Health, Bethesda, MD), Gabriel Defang (Naval Medical Research Unit 3 [NAMRU-3], Cairo, Egypt), Michael Cooper (Armed Forces Health Surveillance Center [AFHSC]) and Emad Mohereb (NAMRU-3). All experiments with live MERS-CoV (Jordan) were performed under biosafety level 3 conditions at the University of Maryland School of Medicine. Vero E6 (monkey kidney epithelial cells, ATCC CRL-1586) for plaque assays were grown in minimal essential medium (Corning) supplemented with 10% (vol/vol) FBS (Sigma Aldrich), 1% l-glutamine (Gibco) and 1% penicillin-streptomycin (Gemini Bio-Products) at 37°C in a 5% CO2 atmosphere.
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6

Osteogenic Differentiation of Human MSCs

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Human bone marrow-derived MSCs (Lonza, Walkersville, MD) were expanded without further characterization in growth medium (GM) consisting of minimum essential alpha medium (α-MEM; Invitrogen, Carlsbad, CA) supplemented with 10% fetal bovine serum (FBS; Atlanta Biologicals, Flowery Branch, GA) and 1% penicillin/streptomycin (Gemini Bio-Products, Sacramento, CA). Cells were cultured under standard conditions (37°C, 21% O2, 5% CO2) and utilized at passage 5. For all experiments, cells were initially seeded in GM and then exposed to osteogenic medium (OM: GM supplemented with 10 mM β-glycerophosphate, 50 μg/mL ascorbate-2-phosphate, and 100 nM dexamethasone, all from Sigma Aldrich, St. Louis, MO).
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7

SARS-CoV-2 Neutralization Titer Assay

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All serum samples were heat-inactivated at 56 °C for 30 min to deactivate complement and allowed to equilibrate to RT prior to processing for neutralization titer. Samples were diluted in duplicate to an initial dilution of 1:20 followed by 1:2 serial dilutions (vaccinated samples), resulting in a 12-dilution series with each well containing 60 µl. All dilutions employed DMEM (Quality Biological), supplemented with 10% (v/v) fetal bovine serum (heat-inactivated, Gibco), 1% (v/v) penicillin/streptomycin (Gemini Bio-products), and 1% (v/v) L-glutamine (2 mM final concentration, Gibco). Dilution plates were then transported into the BSL-3 laboratory, and 60 µl of diluted SARS-CoV-2 (WA-1, courtesy of Dr. Natalie Thornburg/CDC) inoculum was added to each well to result in a multiplicity of infection (MOI) of 0.01 upon transfer to titering plates. A non-treated, virus-only control and mock infection control were included on every plate. The sample/virus mixture was then incubated at 37 °C (5.0% CO2) for 1 h before transferring 100 µl to 96-well titer plates with 5e3 VeroE6 cells. Titer plates were incubated at 37 °C (5.0% CO2) for 72 h, followed by cytopathic effect (CPE) determination for each well in the plate. The first sample dilution to show CPE was reported as the minimum sample dilution required to neutralize >99% of the concentration of SARS-CoV-2 tested (NT99).
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8

Leptin and Signaling Pathway Modulation in Endometrial Cancer

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Type I (Ishikawa, and HEC-1A) and type II EmCa cells (An3Ca and KLE) were cultured in Dulbecco's Modified Eagle's medium (DMEM), 10% fetal bovine serum (FBS from Gemini Bioproducts) and 1% penicillin-streptomycin (ATCC) until they were 80% confluent. Then, cells were serum-deprived by culturing in basal medium for 24 h, and treated for additional 24 h in basal medium containing increasing leptin doses (0, 0.6, 1.2, and 6.25 nM, equivalent to 0, 10, 20 and 100 ng/mL, which characterized leptin levels in overweight, obese and morbid obese patients, respectively) and inhibitors of leptin (IONP-LPrA2), Notch (siRNA Notch1, Notch3 and Notch4) and IL-1 signaling (antibody anti-IL1 R tI) or with the chemotherapeutic paclitaxel.
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9

SARS-CoV-2 and SARS-CoV Virus Propagation

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Vero E6 cells (ATCC CRL 1586) were cultured in Dulbecco’s modified Eagle medium (DMEM; Quality Biological), supplemented with 10% (vol/vol) fetal bovine serum (Sigma), 1% (vol/vol) penicillin-streptomycin (Gemini Bio-products), and 1% (vol/vol) l-glutamine (2 mM final concentration; Gibco). A549-hACE2 cells were cultured in DMEM with 10% fetal bovine serum and 1% penicillin-streptomycin. Cells were maintained at 37°C and 5% CO2. Samples of SARS-CoV-2 were obtained from the CDC following isolation from a patient in Washington State (WA-1 strain; BEI number NR-52281). Stocks were prepared by infection of Vero E6 cells for 2 days when cytopathic effect (CPE) was starting to be visible. Media were collected and clarified by centrifugation prior to being aliquoted for storage at −80°C. The titer of the stock was determined by plaque assay using Vero E6 cells as described previously (31 (link)). All work with infectious virus was performed in a biosafety level 3 laboratory and approved by our institutional biosafety committee. SARS-CoV stock was prepared as previously described (32 (link)). SARS-CoV spike (S) pseudotype viruses were produced as previously described (9 (link)).
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10

Culturing Huntington's Disease Murine Striatal Cells

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Conditionally immortalized wild-type STHdhQ7 (female, Coriell CH00097, RRID: CVCL_M590) and mutant huntingtin homozygous knock-in STHdhQ111 (female, Coriell CH00095, RRID: CVCL_M591) murine striatal progenitor cell lines were purchased from Coriell. Cells were maintained at 33 °C with 5% CO2 and cultured in Dulbecco’s modified Eagle’s medium (DMEM, Corning 10-013) supplemented with 10% fetal bovine serum (FBS, Gemini Bio-Products 100–106), and 1% penicillin/streptomycin (Gemini Bio-Products 400–109).
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